RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 PCDH11XQ9BZA7 1347 aa16.79■□□□□ 0.28
SEC16A-202ENST00000290037 PCDH11YQ9BZA8 1340 aa16.79■□□□□ 0.28
SEC16A-202ENST00000290037 CEP83Q9Y592 693 aa16.78■□□□□ 0.28
SEC16A-202ENST00000290037 TM6SF1Q9BZW5 370 aa16.78■□□□□ 0.28
SEC16A-202ENST00000290037 ORC3Q9UBD5 711 aaPredicted RBP16.78■□□□□ 0.28
SEC16A-202ENST00000290037 TARBP1Q13395 1621 aaKnown RBP16.78■□□□□ 0.28
SEC16A-202ENST00000290037 F13A1P00488 732 aa16.78■□□□□ 0.28
SEC16A-202ENST00000290037 CCDC110Q8TBZ0 833 aa16.78■□□□□ 0.28
SEC16A-202ENST00000290037 RTN1Q16799 776 aa16.78■□□□□ 0.28
SEC16A-202ENST00000290037 IDI1Q13907 227 aa16.78■□□□□ 0.28
SEC16A-202ENST00000290037 PLCD4Q9BRC7 762 aa16.78■□□□□ 0.28
SEC16A-202ENST00000290037 ANKIB1Q9P2G1 1089 aa16.78■□□□□ 0.28
SEC16A-202ENST00000290037 AMOTL2Q9Y2J4 779 aa16.78■□□□□ 0.28
SEC16A-202ENST00000290037 MAGEF1Q9HAY2 307 aa16.78■□□□□ 0.28
SEC16A-202ENST00000290037 CCDC51Q96ER9 411 aa16.78■□□□□ 0.28
SEC16A-202ENST00000290037 SLU7O95391 586 aaKnown RBP16.77■□□□□ 0.28
SEC16A-202ENST00000290037 UBE2Q2Q8WVN8 375 aa16.77■□□□□ 0.28
SEC16A-202ENST00000290037 DCAF5Q96JK2 942 aa16.77■□□□□ 0.28
SEC16A-202ENST00000290037 USP16Q9Y5T5 823 aa16.77■□□□□ 0.28
SEC16A-202ENST00000290037 TRIM75PA6NK02 468 aa16.77■□□□□ 0.28
SEC16A-202ENST00000290037 TTF2Q9UNY4 1162 aaKnown RBP16.77■□□□□ 0.28
SEC16A-202ENST00000290037 KRT13P13646 458 aa16.77■□□□□ 0.28
SEC16A-202ENST00000290037 CCDC40Q4G0X9 1142 aa16.77■□□□□ 0.28
SEC16A-202ENST00000290037 C6orf50Q9HD87 102 aa16.77■□□□□ 0.28
SEC16A-202ENST00000290037 TRMT112Q9UI30 125 aaKnown RBP16.77■□□□□ 0.28
SEC16A-202ENST00000290037 EXOC5O00471 708 aa16.77■□□□□ 0.27
SEC16A-202ENST00000290037 FOSBP53539 338 aa16.77■□□□□ 0.27
SEC16A-202ENST00000290037 UBASH3AP57075 661 aa16.77■□□□□ 0.27
SEC16A-202ENST00000290037 PARP10Q53GL7 1025 aa16.77■□□□□ 0.27
SEC16A-202ENST00000290037 KIF5AQ12840 1032 aa16.77■□□□□ 0.27
SEC16A-202ENST00000290037 IQUBQ8NA54 791 aa16.77■□□□□ 0.27
SEC16A-202ENST00000290037 CEP170Q5SW79 1584 aa16.77■□□□□ 0.27
SEC16A-202ENST00000290037 TNNC1P63316 161 aa16.77■□□□□ 0.27
SEC16A-202ENST00000290037 PAF1Q8N7H5 531 aa16.77■□□□□ 0.27
SEC16A-202ENST00000290037 ADGRL3Q9HAR2 1447 aa16.77■□□□□ 0.27
SEC16A-202ENST00000290037 ZHX3Q9H4I2 956 aa16.76■□□□□ 0.27
SEC16A-202ENST00000290037 TMOD4Q9NZQ9 345 aa16.76■□□□□ 0.27
SEC16A-202ENST00000290037 MAP3K2Q9Y2U5 619 aa16.76■□□□□ 0.27
SEC16A-202ENST00000290037 PRDM15P57071 1507 aaPredicted RBP16.76■□□□□ 0.27
SEC16A-202ENST00000290037 STAT6P42226 847 aa16.76■□□□□ 0.27
SEC16A-202ENST00000290037 PDE4CQ08493 712 aa16.76■□□□□ 0.27
SEC16A-202ENST00000290037 PPP1R2P3Q6NXS1 205 aa16.76■□□□□ 0.27
SEC16A-202ENST00000290037 IMPG2Q9BZV3 1241 aa16.76■□□□□ 0.27
SEC16A-202ENST00000290037 RNF123Q5XPI4 1314 aa16.76■□□□□ 0.27
SEC16A-202ENST00000290037 ADGRF5Q8IZF2 1346 aa16.76■□□□□ 0.27
SEC16A-202ENST00000290037 MTRF1LQ9UGC7 380 aaKnown RBP16.76■□□□□ 0.27
SEC16A-202ENST00000290037 URI1O94763 535 aaPredicted RBP16.76■□□□□ 0.27
SEC16A-202ENST00000290037 FEZ2Q9UHY8 353 aaPredicted RBP16.76■□□□□ 0.27
SEC16A-202ENST00000290037 TMX3Q96JJ7 454 aa16.76■□□□□ 0.27
SEC16A-202ENST00000290037 DHX32Q7L7V1 743 aaKnown RBP16.75■□□□□ 0.27
SEC16A-202ENST00000290037 TAX1BP1Q86VP1 789 aa16.75■□□□□ 0.27
SEC16A-202ENST00000290037 MRPL50Q8N5N7 158 aaKnown RBP16.75■□□□□ 0.27
SEC16A-202ENST00000290037 CFAP57Q96MR6 1250 aa16.75■□□□□ 0.27
SEC16A-202ENST00000290037 SEPT11Q9NVA2 429 aaKnown RBP16.75■□□□□ 0.27
SEC16A-202ENST00000290037 AK9Q5TCS8 1911 aa16.75■□□□□ 0.27
SEC16A-202ENST00000290037 PATL2C9JE40 543 aaKnown RBP16.75■□□□□ 0.27
SEC16A-202ENST00000290037 IGSF3O75054 1194 aa16.75■□□□□ 0.27
SEC16A-202ENST00000290037 GTF2F1P35269 517 aaKnown RBP eCLIP16.75■□□□□ 0.272e-8■■■■■ 34.1
SEC16A-202ENST00000290037 BRPF3Q9ULD4 1205 aa16.75■□□□□ 0.27
SEC16A-202ENST00000290037 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.75■□□□□ 0.27
SEC16A-202ENST00000290037 CFAP58Q5T655 872 aa16.75■□□□□ 0.27
SEC16A-202ENST00000290037 MYD88Q99836 296 aa16.75■□□□□ 0.27
SEC16A-202ENST00000290037 HMGB3O15347 200 aaKnown RBP16.75■□□□□ 0.27
SEC16A-202ENST00000290037 N4BP3O15049 544 aa16.74■□□□□ 0.27
SEC16A-202ENST00000290037 CENPHQ9H3R5 247 aa16.74■□□□□ 0.27
SEC16A-202ENST00000290037 ZFYVE16Q7Z3T8 1539 aa16.74■□□□□ 0.27
SEC16A-202ENST00000290037 SSBP05455 408 aaKnown RBP eCLIP16.74■□□□□ 0.27
SEC16A-202ENST00000290037 SLC17A8Q8NDX2 589 aa16.74■□□□□ 0.27
SEC16A-202ENST00000290037 ABCA8O94911 1581 aa16.74■□□□□ 0.27
SEC16A-202ENST00000290037 NAA16Q6N069 864 aaPredicted RBP16.74■□□□□ 0.27
SEC16A-202ENST00000290037 CTNNA2P26232 953 aa16.74■□□□□ 0.27
SEC16A-202ENST00000290037 UNC13BO14795 1591 aa16.74■□□□□ 0.27
SEC16A-202ENST00000290037 RAPGEF3O95398 923 aa16.74■□□□□ 0.27
SEC16A-202ENST00000290037 MATR3P43243 847 aaKnown RBP eCLIP16.74■□□□□ 0.27
SEC16A-202ENST00000290037 IFT74Q96LB3 600 aa16.74■□□□□ 0.27
SEC16A-202ENST00000290037 ATP2B2Q01814 1243 aa16.74■□□□□ 0.27
SEC16A-202ENST00000290037 BOLA2Q9H3K6 86 aa16.74■□□□□ 0.27
SEC16A-202ENST00000290037 IFIT1BQ5T764 474 aaKnown RBP16.74■□□□□ 0.27
SEC16A-202ENST00000290037 GALNT17Q6IS24 598 aa16.74■□□□□ 0.27
SEC16A-202ENST00000290037 GNA14O95837 355 aa16.73■□□□□ 0.27
SEC16A-202ENST00000290037 MTUS1Q9ULD2 1270 aa16.73■□□□□ 0.27
SEC16A-202ENST00000290037 VTI1AQ96AJ9 217 aa16.73■□□□□ 0.27
SEC16A-202ENST00000290037 IL1RAPL2Q9NP60 686 aa16.73■□□□□ 0.27
SEC16A-202ENST00000290037 STX10O60499 249 aa16.73■□□□□ 0.27
SEC16A-202ENST00000290037 ERCC6LQ2NKX8 1250 aa16.73■□□□□ 0.27
SEC16A-202ENST00000290037 ZNF608Q9ULD9 1512 aaPredicted RBP16.73■□□□□ 0.27
SEC16A-202ENST00000290037 SPECC1Q5M775 1068 aa16.73■□□□□ 0.27
SEC16A-202ENST00000290037 HDXQ7Z353 690 aa16.73■□□□□ 0.27
SEC16A-202ENST00000290037 TMC6Q7Z403 805 aa16.73■□□□□ 0.27
SEC16A-202ENST00000290037 DISP1Q96F81 1524 aa16.73■□□□□ 0.27
SEC16A-202ENST00000290037 AATKQ6ZMQ8 1374 aa16.73■□□□□ 0.27
SEC16A-202ENST00000290037 SPTLC2O15270 562 aa16.73■□□□□ 0.27
SEC16A-202ENST00000290037 NCBP1Q09161 790 aaKnown RBP16.73■□□□□ 0.27
SEC16A-202ENST00000290037 TRIM47Q96LD4 638 aa16.73■□□□□ 0.27
SEC16A-202ENST00000290037 SSFA2P28290 1259 aa16.73■□□□□ 0.27
SEC16A-202ENST00000290037 FAM160A1Q05DH4 1040 aa16.73■□□□□ 0.27
SEC16A-202ENST00000290037 TDRD12Q587J7 1177 aaKnown RBP16.73■□□□□ 0.27
SEC16A-202ENST00000290037 GPR161Q8N6U8 529 aaKnown RBP16.73■□□□□ 0.27
SEC16A-202ENST00000290037 ABCF2Q9UG63 623 aa16.73■□□□□ 0.27
SEC16A-202ENST00000290037 RBM5P52756 815 aaKnown RBP eCLIP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms