RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 GOLGA6L10A6NI86 522 aa13.16□□□□□ -0.3
NPC1L1-201ENST00000289547 C2CD5Q86YS7 1000 aa13.16□□□□□ -0.3
NPC1L1-201ENST00000289547 CCDC8Q9H0W5 538 aaPredicted RBP13.16□□□□□ -0.3
NPC1L1-201ENST00000289547 MKNK2Q9HBH9 465 aa13.16□□□□□ -0.3
NPC1L1-201ENST00000289547 NEMFO60524 1076 aa13.16□□□□□ -0.3
NPC1L1-201ENST00000289547 LARGE2Q8N3Y3 721 aa13.16□□□□□ -0.3
NPC1L1-201ENST00000289547 FEZ1Q99689 392 aa13.16□□□□□ -0.3
NPC1L1-201ENST00000289547 ANKRD1Q15327 319 aa13.16□□□□□ -0.3
NPC1L1-201ENST00000289547 IMMTQ16891 758 aaKnown RBP13.16□□□□□ -0.3
NPC1L1-201ENST00000289547 CCDC83Q8IWF9 413 aa13.16□□□□□ -0.3
NPC1L1-201ENST00000289547 CABP5Q9NP86 173 aa13.16□□□□□ -0.3
NPC1L1-201ENST00000289547 OGFRQ9NZT2 677 aa13.16□□□□□ -0.3
NPC1L1-201ENST00000289547 MST1RQ04912 1400 aa13.15□□□□□ -0.3
NPC1L1-201ENST00000289547 GIGYF1O75420 1035 aaPredicted RBP13.15□□□□□ -0.3
NPC1L1-201ENST00000289547 ARHGAP29Q52LW3 1261 aa13.15□□□□□ -0.3
NPC1L1-201ENST00000289547 DPY19L2Q6NUT2 758 aa13.15□□□□□ -0.3
NPC1L1-201ENST00000289547 NCAPD2Q15021 1401 aa13.15□□□□□ -0.3
NPC1L1-201ENST00000289547 CCDC69A6NI79 296 aa13.15□□□□□ -0.3
NPC1L1-201ENST00000289547 ZSCAN12O43309 604 aa13.15□□□□□ -0.3
NPC1L1-201ENST00000289547 UFL1O94874 794 aa13.15□□□□□ -0.3
NPC1L1-201ENST00000289547 BMP2KLQ5H9B9 411 aa13.15□□□□□ -0.3
NPC1L1-201ENST00000289547 NIM1KQ8IY84 436 aa13.15□□□□□ -0.3
NPC1L1-201ENST00000289547 BOLA2Q9H3K6 86 aa13.15□□□□□ -0.3
NPC1L1-201ENST00000289547 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.15□□□□□ -0.3
NPC1L1-201ENST00000289547 PDIA4P13667 645 aaKnown RBP13.15□□□□□ -0.3
NPC1L1-201ENST00000289547 TNNI2P48788 182 aa13.15□□□□□ -0.3
NPC1L1-201ENST00000289547 TCIRG1Q13488 830 aa13.15□□□□□ -0.3
NPC1L1-201ENST00000289547 USPL1Q5W0Q7 1092 aa13.15□□□□□ -0.3
NPC1L1-201ENST00000289547 BLOC1S2Q6QNY1 142 aa13.15□□□□□ -0.3
NPC1L1-201ENST00000289547 CCDC186Q7Z3E2 898 aa13.15□□□□□ -0.3
NPC1L1-201ENST00000289547 CCDC125Q86Z20 511 aa13.15□□□□□ -0.3
NPC1L1-201ENST00000289547 FAM89AQ96GI7 184 aa13.15□□□□□ -0.3
NPC1L1-201ENST00000289547 NAPBQ9H115 298 aa13.15□□□□□ -0.3
NPC1L1-201ENST00000289547 PHAXQ9H814 394 aaKnown RBP13.15□□□□□ -0.3
NPC1L1-201ENST00000289547 TERF1P54274 439 aa13.15□□□□□ -0.31
NPC1L1-201ENST00000289547 RAB3GAP1Q15042 981 aa13.15□□□□□ -0.31
NPC1L1-201ENST00000289547 CWF19L2Q2TBE0 894 aaKnown RBP13.15□□□□□ -0.31
NPC1L1-201ENST00000289547 GIMAP6Q6P9H5 292 aa13.15□□□□□ -0.31
NPC1L1-201ENST00000289547 C3P01024 1663 aa13.15□□□□□ -0.31
NPC1L1-201ENST00000289547 RIMBP2O15034 1052 aa13.14□□□□□ -0.31
NPC1L1-201ENST00000289547 SNW1Q13573 536 aaKnown RBP13.14□□□□□ -0.31
NPC1L1-201ENST00000289547 GJA3Q9Y6H8 435 aa13.14□□□□□ -0.31
NPC1L1-201ENST00000289547 SPATA31A5Q5VU36 1347 aa13.14□□□□□ -0.31
NPC1L1-201ENST00000289547 SPATA31A7Q8IWB4 1347 aa13.14□□□□□ -0.31
NPC1L1-201ENST00000289547 NEURL4Q96JN8 1562 aa13.14□□□□□ -0.31
NPC1L1-201ENST00000289547 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.14□□□□□ -0.31
NPC1L1-201ENST00000289547 GOLGA6L7A0A1B0GV03 622 aa13.14□□□□□ -0.31
NPC1L1-201ENST00000289547 SMTNL1A8MU46 457 aa13.14□□□□□ -0.31
NPC1L1-201ENST00000289547 KRT32Q14532 448 aa13.14□□□□□ -0.31
NPC1L1-201ENST00000289547 PIGBQ92521 554 aa13.14□□□□□ -0.31
NPC1L1-201ENST00000289547 FAM107BQ9H098 131 aa13.14□□□□□ -0.31
NPC1L1-201ENST00000289547 AXIN2Q9Y2T1 843 aa13.14□□□□□ -0.31
NPC1L1-201ENST00000289547 ADRA2BP18089 450 aa13.14□□□□□ -0.31
NPC1L1-201ENST00000289547 ZNF165P49910 485 aa13.14□□□□□ -0.31
NPC1L1-201ENST00000289547 KRT24Q2M2I5 525 aa13.14□□□□□ -0.31
NPC1L1-201ENST00000289547 ZNF444Q8N0Y2 327 aaPredicted RBP13.14□□□□□ -0.31
NPC1L1-201ENST00000289547 TSPYL6Q8N831 410 aa13.14□□□□□ -0.31
NPC1L1-201ENST00000289547 CRNKL1Q9BZJ0 848 aaKnown RBP13.14□□□□□ -0.31
NPC1L1-201ENST00000289547 SCAND2PQ9GZW5 306 aaPredicted RBP13.14□□□□□ -0.31
NPC1L1-201ENST00000289547 ECHDC1Q9NTX5 307 aa13.14□□□□□ -0.31
NPC1L1-201ENST00000289547 PCDHB15Q9Y5E8 787 aa13.14□□□□□ -0.31
NPC1L1-201ENST00000289547 PLCG2P16885 1265 aa13.14□□□□□ -0.31
NPC1L1-201ENST00000289547 JMYQ8N9B5 988 aa13.14□□□□□ -0.31
NPC1L1-201ENST00000289547 RNF41Q9H4P4 317 aaPredicted RBP13.14□□□□□ -0.31
NPC1L1-201ENST00000289547 SSH2Q76I76 1423 aa13.14□□□□□ -0.31
NPC1L1-201ENST00000289547 ANO10Q9NW15 660 aa13.13□□□□□ -0.31
NPC1L1-201ENST00000289547 PNPLA6Q8IY17 1366 aa13.13□□□□□ -0.31
NPC1L1-201ENST00000289547 MAST3O60307 1309 aa13.13□□□□□ -0.31
NPC1L1-201ENST00000289547 MAP3K15Q6ZN16 1313 aa13.13□□□□□ -0.31
NPC1L1-201ENST00000289547 CASTP20810 708 aaKnown RBP13.13□□□□□ -0.31
NPC1L1-201ENST00000289547 KIF4BQ2VIQ3 1234 aa13.13□□□□□ -0.31
NPC1L1-201ENST00000289547 CCDC181Q5TID7 509 aa13.13□□□□□ -0.31
NPC1L1-201ENST00000289547 SNX21Q969T3 373 aa13.13□□□□□ -0.31
NPC1L1-201ENST00000289547 TRIM35Q9UPQ4 493 aa13.13□□□□□ -0.31
NPC1L1-201ENST00000289547 CASQ1P31415 396 aa13.13□□□□□ -0.31
NPC1L1-201ENST00000289547 CWC27Q6UX04 472 aaKnown RBP13.13□□□□□ -0.31
NPC1L1-201ENST00000289547 ARHGAP27Q6ZUM4 889 aa13.13□□□□□ -0.31
NPC1L1-201ENST00000289547 C10orf67Q8IYJ2 551 aa13.13□□□□□ -0.31
NPC1L1-201ENST00000289547 SMARCA5O60264 1052 aaPredicted RBP13.12□□□□□ -0.31
NPC1L1-201ENST00000289547 ITGA6P23229 1130 aa13.12□□□□□ -0.31
NPC1L1-201ENST00000289547 U2AF2P26368 475 aaKnown RBP eCLIP13.12□□□□□ -0.312e-6■■■□□ 18.4
NPC1L1-201ENST00000289547 ATP8B2P98198 1209 aa13.12□□□□□ -0.31
NPC1L1-201ENST00000289547 TMC4Q7Z404 712 aa13.12□□□□□ -0.31
NPC1L1-201ENST00000289547 SMC5Q8IY18 1101 aa13.12□□□□□ -0.31
NPC1L1-201ENST00000289547 ZNHIT6Q9NWK9 470 aaKnown RBP13.12□□□□□ -0.31
NPC1L1-201ENST00000289547 USP19O94966 1318 aa13.12□□□□□ -0.31
NPC1L1-201ENST00000289547 ODF2Q5BJF6 829 aa13.12□□□□□ -0.31
NPC1L1-201ENST00000289547 STK11IPQ8N1F8 1099 aa13.12□□□□□ -0.31
NPC1L1-201ENST00000289547 UBE2HP62256 183 aa13.12□□□□□ -0.31
NPC1L1-201ENST00000289547 ATF5Q9Y2D1 282 aaPredicted RBP13.12□□□□□ -0.31
NPC1L1-201ENST00000289547 U3KPZ7 1027 aaPredicted RBP13.12□□□□□ -0.31
NPC1L1-201ENST00000289547 EPB41L2O43491 1005 aaKnown RBP13.11□□□□□ -0.31
NPC1L1-201ENST00000289547 RPS6KA4O75676 772 aa13.11□□□□□ -0.31
NPC1L1-201ENST00000289547 TRIM22Q8IYM9 498 aa13.11□□□□□ -0.31
NPC1L1-201ENST00000289547 DDX11Q96FC9 970 aa13.11□□□□□ -0.31
NPC1L1-201ENST00000289547 RBSNQ9H1K0 784 aa13.11□□□□□ -0.31
NPC1L1-201ENST00000289547 TMX1Q9H3N1 280 aa13.11□□□□□ -0.31
NPC1L1-201ENST00000289547 MINDY4BA8MYZ0 360 aa13.11□□□□□ -0.31
NPC1L1-201ENST00000289547 EN1Q05925 392 aaPredicted RBP13.11□□□□□ -0.31
NPC1L1-201ENST00000289547 TXNRD1Q16881 649 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms