RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 CTAGE9A4FU28 777 aa6.46□□□□□ -1.38
VCAN-201ENST00000265077 UBASH3AP57075 661 aa6.46□□□□□ -1.38
VCAN-201ENST00000265077 METTL24Q5JXM2 366 aa6.46□□□□□ -1.38
VCAN-201ENST00000265077 TTF1Q15361 905 aaPredicted RBP6.45□□□□□ -1.38
VCAN-201ENST00000265077 IQCA1Q86XH1 822 aa6.45□□□□□ -1.38
VCAN-201ENST00000265077 RMDN2Q96LZ7 410 aa6.45□□□□□ -1.38
VCAN-201ENST00000265077 PLVAPQ9BX97 442 aa6.45□□□□□ -1.38
VCAN-201ENST00000265077 RIPOR2Q9Y4F9 1068 aa6.45□□□□□ -1.38
VCAN-201ENST00000265077 STAMBPO95630 424 aa6.45□□□□□ -1.38
VCAN-201ENST00000265077 POLD1P28340 1107 aa6.45□□□□□ -1.38
VCAN-201ENST00000265077 RWDD2BP57060 319 aa6.45□□□□□ -1.38
VCAN-201ENST00000265077 TYRO3Q06418 890 aa6.45□□□□□ -1.38
VCAN-201ENST00000265077 RRS1Q15050 365 aaKnown RBP6.45□□□□□ -1.38
VCAN-201ENST00000265077 SDSP20132 328 aa6.45□□□□□ -1.38
VCAN-201ENST00000265077 ESCO1Q5FWF5 840 aa6.45□□□□□ -1.38
VCAN-201ENST00000265077 STXBP4Q6ZWJ1 553 aa6.45□□□□□ -1.38
VCAN-201ENST00000265077 ATP8B1O43520 1251 aa6.45□□□□□ -1.38
VCAN-201ENST00000265077 NLRP5P59047 1200 aa6.45□□□□□ -1.38
VCAN-201ENST00000265077 MORC2Q9Y6X9 1032 aaPredicted RBP6.45□□□□□ -1.38
VCAN-201ENST00000265077 GBP1P32455 592 aa6.45□□□□□ -1.38
VCAN-201ENST00000265077 ATP11AP98196 1134 aa6.45□□□□□ -1.38
VCAN-201ENST00000265077 INF2Q27J81 1249 aa6.45□□□□□ -1.38
VCAN-201ENST00000265077 GOLGA6CA6NDK9 693 aa6.45□□□□□ -1.38
VCAN-201ENST00000265077 PPFIA3O75145 1194 aa6.45□□□□□ -1.38
VCAN-201ENST00000265077 GOLGA6DP0CG33 693 aa6.45□□□□□ -1.38
VCAN-201ENST00000265077 THEMISQ8N1K5 641 aaPredicted RBP6.45□□□□□ -1.38
VCAN-201ENST00000265077 GBP5Q96PP8 586 aa6.45□□□□□ -1.38
VCAN-201ENST00000265077 GOLGA6AQ9NYA3 693 aa6.45□□□□□ -1.38
VCAN-201ENST00000265077 STARD3NLO95772 234 aa6.45□□□□□ -1.38
VCAN-201ENST00000265077 PRPHP41219 470 aa6.45□□□□□ -1.38
VCAN-201ENST00000265077 HLTFQ14527 1009 aaKnown RBP eCLIP6.45□□□□□ -1.38
VCAN-201ENST00000265077 STMN4Q9H169 189 aaPredicted RBP6.45□□□□□ -1.38
VCAN-201ENST00000265077 TCP11L1Q9NUJ3 509 aa6.45□□□□□ -1.38
VCAN-201ENST00000265077 ATP2B2Q01814 1243 aa6.45□□□□□ -1.38
VCAN-201ENST00000265077 CCDC178Q5BJE1 867 aa6.45□□□□□ -1.38
VCAN-201ENST00000265077 TMED8Q6PL24 325 aaPredicted RBP6.45□□□□□ -1.38
VCAN-201ENST00000265077 NPHP3Q7Z494 1330 aa6.45□□□□□ -1.38
VCAN-201ENST00000265077 DUOX2Q9NRD8 1548 aa6.45□□□□□ -1.38
VCAN-201ENST00000265077 POGZQ7Z3K3 1410 aa6.45□□□□□ -1.38
VCAN-201ENST00000265077 RBM26Q5T8P6 1007 aaKnown RBP6.45□□□□□ -1.38
VCAN-201ENST00000265077 ARFGAP2Q8N6H7 521 aa6.45□□□□□ -1.38
VCAN-201ENST00000265077 GDPD2Q9HCC8 539 aa6.45□□□□□ -1.38
VCAN-201ENST00000265077 IDH1O75874 414 aaKnown RBP6.44□□□□□ -1.38
VCAN-201ENST00000265077 CYLC1P35663 651 aaPredicted RBP6.44□□□□□ -1.38
VCAN-201ENST00000265077 TEX11Q8IYF3 940 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 NEK1Q96PY6 1258 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 CCDC113Q9H0I3 377 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 PIK3C2GO75747 1445 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 LRRD1A4D1F6 860 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 EIF3CLB5ME19 914 aaKnown RBP6.44□□□□□ -1.38
VCAN-201ENST00000265077 ZEB2O60315 1214 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 FLIIQ13045 1269 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 GAS2L3Q86XJ1 694 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 SLF2Q8IX21 1173 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 CALML4Q96GE6 196 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 EIF3CQ99613 913 aaKnown RBP6.44□□□□□ -1.38
VCAN-201ENST00000265077 KIF2CQ99661 725 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 SELENOOQ9BVL4 669 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 ZNF215Q9UL58 517 aaPredicted RBP6.44□□□□□ -1.38
VCAN-201ENST00000265077 DNMT1P26358 1616 aaKnown RBP6.44□□□□□ -1.38
VCAN-201ENST00000265077 IFIT1P09914 478 aaKnown RBP6.44□□□□□ -1.38
VCAN-201ENST00000265077 SPECC1Q5M775 1068 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 MCM10Q7L590 875 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 IFT74Q96LB3 600 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 POLR3AO14802 1390 aaPredicted RBP6.44□□□□□ -1.38
VCAN-201ENST00000265077 TMX3Q96JJ7 454 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 CCDC160A6NGH7 325 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 TUBB2AQ13885 445 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 BRD3Q15059 726 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 MAATS1Q7Z4T9 603 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 USP48Q86UV5 1035 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 TSC22D3Q99576 134 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 TUBB2BQ9BVA1 445 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 MAP7D1Q3KQU3 841 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 ATL3Q6DD88 541 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 ARMC9Q7Z3E5 817 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 N4BP3O15049 544 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 SRLQ86TD4 932 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.44□□□□□ -1.38
VCAN-201ENST00000265077 IFIT5Q13325 482 aaKnown RBP6.44□□□□□ -1.38
VCAN-201ENST00000265077 C6orf163Q5TEZ5 329 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 FBXO18Q8NFZ0 1043 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 ORC3Q9UBD5 711 aaPredicted RBP6.44□□□□□ -1.38
VCAN-201ENST00000265077 ANO6Q4KMQ2 910 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 GIMAP6Q6P9H5 292 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 RASAL2Q9UJF2 1139 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 ZNF652Q9Y2D9 606 aa6.44□□□□□ -1.38
VCAN-201ENST00000265077 CCDC194A0A1B0GVG4 234 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 DNAJC8O75937 253 aaPredicted RBP6.43□□□□□ -1.38
VCAN-201ENST00000265077 CYP2C19P33261 490 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 CTNNBL1Q8WYA6 563 aaPredicted RBP6.43□□□□□ -1.38
VCAN-201ENST00000265077 PPFIA4O75335 1185 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 CCDC155Q8N6L0 562 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 INSRP06213 1382 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 ZNF76P36508 570 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 SLFNL1Q499Z3 407 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 NCOA7Q8NI08 942 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 RBM42Q9BTD8 480 aaKnown RBP6.43□□□□□ -1.38
VCAN-201ENST00000265077 PRAG1Q86YV5 1406 aa6.43□□□□□ -1.38
VCAN-201ENST00000265077 CHUKO15111 745 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms