RNA–Protein interactions for RNA: ENST00000216420.11

CGRRF1-201, Transcript of cell growth regulator with ring finger domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGRRF1, Length 2,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1-201ENST00000216420 USP28Q96RU2 1077 aa21.36■■□□□ 1.01
CGRRF1-201ENST00000216420 CPP00450 1065 aa21.35■■□□□ 1.01
CGRRF1-201ENST00000216420 TXLNAP40222 546 aa21.35■■□□□ 1.01
CGRRF1-201ENST00000216420 NLRP12P59046 1061 aa21.35■■□□□ 1.01
CGRRF1-201ENST00000216420 GOLGA1Q92805 767 aa21.35■■□□□ 1.01
CGRRF1-201ENST00000216420 DDX11Q96FC9 970 aa21.35■■□□□ 1.01
CGRRF1-201ENST00000216420 NEDD4P46934 1319 aa21.35■■□□□ 1.01
CGRRF1-201ENST00000216420 MYO1BO43795 1136 aa21.35■■□□□ 1.01
CGRRF1-201ENST00000216420 FANCCQ00597 558 aa21.35■■□□□ 1.01
CGRRF1-201ENST00000216420 ADALQ6DHV7 355 aa21.35■■□□□ 1.01
CGRRF1-201ENST00000216420 NUTM2FA1L443 756 aa21.34■■□□□ 1.01
CGRRF1-201ENST00000216420 SOX12O15370 315 aa21.34■■□□□ 1.01
CGRRF1-201ENST00000216420 ARHGAP6O43182 974 aa21.34■■□□□ 1.01
CGRRF1-201ENST00000216420 CBFA2T2O43439 604 aa21.34■■□□□ 1.01
CGRRF1-201ENST00000216420 USP5P45974 858 aa21.34■■□□□ 1.01
CGRRF1-201ENST00000216420 APOBRQ0VD83 1088 aa21.34■■□□□ 1.01
CGRRF1-201ENST00000216420 NUTM2GQ5VZR2 741 aa21.34■■□□□ 1.01
CGRRF1-201ENST00000216420 PACS2Q86VP3 889 aa21.34■■□□□ 1.01
CGRRF1-201ENST00000216420 SUGP1Q8IWZ8 645 aaKnown RBP21.34■■□□□ 1.01
CGRRF1-201ENST00000216420 PPM1EQ8WY54 764 aa21.34■■□□□ 1.01
CGRRF1-201ENST00000216420 ALDH1L1O75891 902 aa21.33■■□□□ 1.01
CGRRF1-201ENST00000216420 ATP2B1P20020 1258 aa21.33■■□□□ 1.01
CGRRF1-201ENST00000216420 CORO7P57737 925 aa21.33■■□□□ 1.01
CGRRF1-201ENST00000216420 SIRT1Q96EB6 747 aa21.33■■□□□ 1.01
CGRRF1-201ENST00000216420 TAF6LQ9Y6J9 622 aa21.33■■□□□ 1.01
CGRRF1-201ENST00000216420 PFKFB2O60825 505 aa21.33■■□□□ 1
CGRRF1-201ENST00000216420 NBPF7P0C2Y1 421 aaPredicted RBP21.33■■□□□ 1
CGRRF1-201ENST00000216420 HSP90AB2PQ58FF8 381 aa21.33■■□□□ 1
CGRRF1-201ENST00000216420 TMEM139Q8IV31 216 aa21.33■■□□□ 1
CGRRF1-201ENST00000216420 PPP2R2CQ9Y2T4 447 aa21.33■■□□□ 1
CGRRF1-201ENST00000216420 MED1Q15648 1581 aaPredicted RBP21.32■■□□□ 1
CGRRF1-201ENST00000216420 A0A0D9SFI3 127 aa21.32■■□□□ 1
CGRRF1-201ENST00000216420 POTEB2H3BUK9 544 aa21.32■■□□□ 1
CGRRF1-201ENST00000216420 CEBPZQ03701 1054 aaKnown RBP21.32■■□□□ 1
CGRRF1-201ENST00000216420 BEND3Q5T5X7 828 aa21.32■■□□□ 1
CGRRF1-201ENST00000216420 KIFC2Q96AC6 838 aa21.32■■□□□ 1
CGRRF1-201ENST00000216420 SDF4Q9BRK5 362 aa21.32■■□□□ 1
CGRRF1-201ENST00000216420 EPC1Q9H2F5 836 aa21.32■■□□□ 1
CGRRF1-201ENST00000216420 EIF3CLB5ME19 914 aaKnown RBP21.32■■□□□ 1
CGRRF1-201ENST00000216420 TUBB4BP68371 445 aa21.32■■□□□ 1
CGRRF1-201ENST00000216420 OS9Q13438 667 aaPredicted RBP21.32■■□□□ 1
CGRRF1-201ENST00000216420 ZRSR1Q15695 479 aaKnown RBP21.32■■□□□ 1
CGRRF1-201ENST00000216420 ZBTB9Q96C00 473 aa21.32■■□□□ 1
CGRRF1-201ENST00000216420 EIF3CQ99613 913 aaKnown RBP21.32■■□□□ 1
CGRRF1-201ENST00000216420 RTEL1Q9NZ71 1219 aa21.32■■□□□ 1
CGRRF1-201ENST00000216420 RAB21Q9UL25 225 aa21.32■■□□□ 1
CGRRF1-201ENST00000216420 SBNO1A3KN83 1393 aa21.32■■□□□ 1
CGRRF1-201ENST00000216420 ME1P48163 572 aa21.31■■□□□ 1
CGRRF1-201ENST00000216420 SWT1Q5T5J6 900 aaKnown RBP21.31■■□□□ 1
CGRRF1-201ENST00000216420 NSUN7Q8NE18 718 aaKnown RBP21.31■■□□□ 1
CGRRF1-201ENST00000216420 FTOQ9C0B1 505 aaKnown RBP eCLIP21.31■■□□□ 1
CGRRF1-201ENST00000216420 HSD3B7Q9H2F3 369 aa21.31■■□□□ 1
CGRRF1-201ENST00000216420 PCDHA7Q9UN72 937 aa21.31■■□□□ 1
CGRRF1-201ENST00000216420 HDXQ7Z353 690 aa21.3■■□□□ 1
CGRRF1-201ENST00000216420 VSTM4Q8IW00 320 aa21.3■■□□□ 1
CGRRF1-201ENST00000216420 NEK1Q96PY6 1258 aa21.3■■□□□ 1
CGRRF1-201ENST00000216420 UTP14AQ9BVJ6 771 aaKnown RBP21.3■■□□□ 1
CGRRF1-201ENST00000216420 NCAPD2Q15021 1401 aa21.3■■□□□ 1
CGRRF1-201ENST00000216420 EIF3JO75822 258 aaKnown RBP21.3■■□□□ 1
CGRRF1-201ENST00000216420 PSEN1P49768 467 aa21.3■■□□□ 1
CGRRF1-201ENST00000216420 SCRN1Q12765 414 aa21.3■■□□□ 1
CGRRF1-201ENST00000216420 BEND6Q5SZJ8 279 aaPredicted RBP21.3■■□□□ 1
CGRRF1-201ENST00000216420 TAF5LO75529 589 aa21.29■■□□□ 1
CGRRF1-201ENST00000216420 MSANTD4Q8NCY6 345 aa21.29■■□□□ 1
CGRRF1-201ENST00000216420 WDR24Q96S15 920 aa21.29■■□□□ 1
CGRRF1-201ENST00000216420 SENP3Q9H4L4 574 aaPredicted RBP21.29■■□□□ 1
CGRRF1-201ENST00000216420 TOPAZ1Q8N9V7 1692 aa21.29■■□□□ 1
CGRRF1-201ENST00000216420 IGSF1Q8N6C5 1336 aa21.29■■□□□ 1
CGRRF1-201ENST00000216420 SALL1Q9NSC2 1324 aa21.29■■□□□ 1
CGRRF1-201ENST00000216420 GNL2Q13823 731 aaKnown RBP21.28■■□□□ 1
CGRRF1-201ENST00000216420 Q6ZUG5 572 aa21.28■■□□□ 1
CGRRF1-201ENST00000216420 PHAXQ9H814 394 aaKnown RBP21.28■■□□□ 1
CGRRF1-201ENST00000216420 TSPOAP1O95153 1857 aa21.28■■□□□ 1
CGRRF1-201ENST00000216420 ILDR1Q86SU0 546 aaPredicted RBP21.28■■□□□ 1
CGRRF1-201ENST00000216420 NECTIN2Q92692 538 aa21.28■■□□□ 1
CGRRF1-201ENST00000216420 ERCC4Q92889 916 aaPredicted RBP21.28■■□□□ 1
CGRRF1-201ENST00000216420 VPS18Q9P253 973 aa21.28■■□□□ 1
CGRRF1-201ENST00000216420 NDUFA8P51970 172 aa21.27■■□□□ 1
CGRRF1-201ENST00000216420 GNG11P61952 73 aa21.27■■□□□ 1
CGRRF1-201ENST00000216420 HDGFL1Q5TGJ6 251 aa21.27■■□□□ 1
CGRRF1-201ENST00000216420 DNAAF4Q8WXU2 420 aa21.27■■□□□ 1
CGRRF1-201ENST00000216420 RFX7Q2KHR2 1363 aa21.27■■□□□ 1
CGRRF1-201ENST00000216420 SLC3A2P08195 630 aaKnown RBP21.27■□□□□ 0.99
CGRRF1-201ENST00000216420 AACSQ86V21 672 aa21.27■□□□□ 0.99
CGRRF1-201ENST00000216420 DEF6Q9H4E7 631 aa21.27■□□□□ 0.99
CGRRF1-201ENST00000216420 PDE11AQ9HCR9 933 aa21.27■□□□□ 0.99
CGRRF1-201ENST00000216420 TECPR2O15040 1411 aa21.27■□□□□ 0.99
CGRRF1-201ENST00000216420 LAMA4Q16363 1823 aa21.26■□□□□ 0.99
CGRRF1-201ENST00000216420 LOC102724159A0A0B4J2E5 919 aa21.26■□□□□ 0.99
CGRRF1-201ENST00000216420 STX10O60499 249 aa21.26■□□□□ 0.99
CGRRF1-201ENST00000216420 CTDNEP1O95476 244 aa21.26■□□□□ 0.99
CGRRF1-201ENST00000216420 UBASH3AP57075 661 aa21.26■□□□□ 0.99
CGRRF1-201ENST00000216420 TBX2Q13207 712 aaPredicted RBP21.26■□□□□ 0.99
CGRRF1-201ENST00000216420 TUBB2AQ13885 445 aa21.26■□□□□ 0.99
CGRRF1-201ENST00000216420 PWP2Q15269 919 aaKnown RBP21.26■□□□□ 0.99
CGRRF1-201ENST00000216420 EFCAB13Q8IY85 973 aa21.26■□□□□ 0.99
CGRRF1-201ENST00000216420 SECISBP2LQ93073 1101 aaKnown RBP21.26■□□□□ 0.99
CGRRF1-201ENST00000216420 TUBB2BQ9BVA1 445 aa21.26■□□□□ 0.99
CGRRF1-201ENST00000216420 L1RE1Q9UN81 338 aa21.26■□□□□ 0.99
CGRRF1-201ENST00000216420 NRXN3Q9Y4C0 1643 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms