RNA–Protein interactions for RNA: ENSMUST00000093132.12

Clk4-201, Transcript of Dual specificity protein kinase CLK4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk4, Length 1,949 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4-201ENSMUST00000093132 Camkk2Q8C078 588 aa21.27■■□□□ 1
Clk4-201ENSMUST00000093132 Ppp4r3bQ922R5 820 aa21.27■■□□□ 1
Clk4-201ENSMUST00000093132 Magea2Q9R2A2 320 aa21.27■■□□□ 1
Clk4-201ENSMUST00000093132 Myh4Q5SX39 1939 aa21.27■■□□□ 1
Clk4-201ENSMUST00000093132 Hsp90b1P08113 802 aaKnown RBP21.27■■□□□ 1
Clk4-201ENSMUST00000093132 Rad23bP54728 416 aa21.27■■□□□ 1
Clk4-201ENSMUST00000093132 Il17raQ60943 864 aa21.27■■□□□ 1
Clk4-201ENSMUST00000093132 Pram1Q6BCL1 675 aa21.27■■□□□ 1
Clk4-201ENSMUST00000093132 Ipo8Q7TMY7 1010 aa21.27■■□□□ 1
Clk4-201ENSMUST00000093132 Myoz2Q9JJW5 264 aa21.27■■□□□ 1
Clk4-201ENSMUST00000093132 Mroh6V9GX81 722 aa21.27■■□□□ 1
Clk4-201ENSMUST00000093132 NpeppsQ11011 920 aa21.26■□□□□ 0.99
Clk4-201ENSMUST00000093132 Fchsd1Q6PFY1 688 aa21.26■□□□□ 0.99
Clk4-201ENSMUST00000093132 Hirip3Q8BLH7 601 aa21.26■□□□□ 0.99
Clk4-201ENSMUST00000093132 Bmp2kQ91Z96 1138 aa21.26■□□□□ 0.99
Clk4-201ENSMUST00000093132 Ptf1aQ9QX98 324 aa21.26■□□□□ 0.99
Clk4-201ENSMUST00000093132 Btaf1E9QAE3 1848 aa21.26■□□□□ 0.99
Clk4-201ENSMUST00000093132 Mfap1aC0HKD8 439 aaKnown RBP21.25■□□□□ 0.99
Clk4-201ENSMUST00000093132 Mfap1bC0HKD9 439 aaKnown RBP21.25■□□□□ 0.99
Clk4-201ENSMUST00000093132 Csf1rP09581 977 aa21.25■□□□□ 0.99
Clk4-201ENSMUST00000093132 Slc7a3P70423 618 aa21.25■□□□□ 0.99
Clk4-201ENSMUST00000093132 Mrps5Q99N87 432 aaKnown RBP21.25■□□□□ 0.99
Clk4-201ENSMUST00000093132 Prl7d1P04769 244 aa21.25■□□□□ 0.99
Clk4-201ENSMUST00000093132 Ube3cQ80U95 1083 aa21.25■□□□□ 0.99
Clk4-201ENSMUST00000093132 Carmil3Q3UFQ8 1375 aa21.24■□□□□ 0.99
Clk4-201ENSMUST00000093132 Ubxn2bQ0KL01 331 aa21.24■□□□□ 0.99
Clk4-201ENSMUST00000093132 Map10Q8BJS7 891 aa21.24■□□□□ 0.99
Clk4-201ENSMUST00000093132 Nrxn2E9Q7X7 1710 aa21.24■□□□□ 0.99
Clk4-201ENSMUST00000093132 Arfgef1G3X9K3 1846 aaKnown RBP21.23■□□□□ 0.99
Clk4-201ENSMUST00000093132 Ppfia1B2RXQ2 1266 aa21.23■□□□□ 0.99
Clk4-201ENSMUST00000093132 Vsig10D3YX43 558 aa21.23■□□□□ 0.99
Clk4-201ENSMUST00000093132 PnnO35691 725 aaKnown RBP21.23■□□□□ 0.99
Clk4-201ENSMUST00000093132 Csrnp1P59054 583 aa21.23■□□□□ 0.99
Clk4-201ENSMUST00000093132 Spg7Q3ULF4 781 aa21.23■□□□□ 0.99
Clk4-201ENSMUST00000093132 Tbc1d32Q3URV1 1296 aa21.23■□□□□ 0.99
Clk4-201ENSMUST00000093132 Rbm15bQ6PHZ5 887 aaKnown RBP21.23■□□□□ 0.99
Clk4-201ENSMUST00000093132 Rbm33Q9CXK9 1231 aaKnown RBP21.23■□□□□ 0.99
Clk4-201ENSMUST00000093132 Mast3Q3U214 1321 aa21.23■□□□□ 0.99
Clk4-201ENSMUST00000093132 Klrk1O54709 232 aa21.23■□□□□ 0.99
Clk4-201ENSMUST00000093132 Slc51aQ8R000 340 aa21.23■□□□□ 0.99
Clk4-201ENSMUST00000093132 Tbc1d8Q9Z1A9 1134 aa21.23■□□□□ 0.99
Clk4-201ENSMUST00000093132 Letm1Q9Z2I0 738 aa21.23■□□□□ 0.99
Clk4-201ENSMUST00000093132 Ppp1r21Q3TDD9 780 aa21.22■□□□□ 0.99
Clk4-201ENSMUST00000093132 Mdm2P23804 489 aa21.21■□□□□ 0.99
Clk4-201ENSMUST00000093132 Tuft1O08970 390 aa21.21■□□□□ 0.99
Clk4-201ENSMUST00000093132 Mapkapk5O54992 473 aa21.21■□□□□ 0.99
Clk4-201ENSMUST00000093132 Stat5bP42232 786 aa21.21■□□□□ 0.99
Clk4-201ENSMUST00000093132 Myh3P13541 1940 aa21.21■□□□□ 0.99
Clk4-201ENSMUST00000093132 Nedd4P46935 887 aaKnown RBP21.2■□□□□ 0.98
Clk4-201ENSMUST00000093132 Ddx11Q6AXC6 880 aa21.2■□□□□ 0.98
Clk4-201ENSMUST00000093132 Skor1Q8BX46 964 aa21.2■□□□□ 0.98
Clk4-201ENSMUST00000093132 Fam83bQ0VBM2 1012 aa21.19■□□□□ 0.98
Clk4-201ENSMUST00000093132 Pla2g4fQ50L41 855 aa21.19■□□□□ 0.98
Clk4-201ENSMUST00000093132 Ppip5k2Q6ZQB6 1129 aa21.19■□□□□ 0.98
Clk4-201ENSMUST00000093132 Gpr101Q80T62 511 aa21.19■□□□□ 0.98
Clk4-201ENSMUST00000093132 Ptcd1Q8C2E4 695 aaKnown RBP21.19■□□□□ 0.98
Clk4-201ENSMUST00000093132 Pus3Q9JI38 481 aa21.19■□□□□ 0.98
Clk4-201ENSMUST00000093132 FliiQ9JJ28 1271 aa21.19■□□□□ 0.98
Clk4-201ENSMUST00000093132 Cyp2d10P24456 504 aa21.19■□□□□ 0.98
Clk4-201ENSMUST00000093132 Edrf1Q6GQV7 1239 aa21.19■□□□□ 0.98
Clk4-201ENSMUST00000093132 Trmt44Q9D2Q2 713 aa21.19■□□□□ 0.98
Clk4-201ENSMUST00000093132 Rbbp6P97868 1790 aaKnown RBP21.19■□□□□ 0.98
Clk4-201ENSMUST00000093132 Flt1P35969 1333 aa21.19■□□□□ 0.98
Clk4-201ENSMUST00000093132 TrhQ62361 256 aa21.18■□□□□ 0.98
Clk4-201ENSMUST00000093132 Plekhg6Q8R0J1 787 aa21.18■□□□□ 0.98
Clk4-201ENSMUST00000093132 Tmc1Q8R4P5 757 aa21.18■□□□□ 0.98
Clk4-201ENSMUST00000093132 Kif22Q3V300 660 aa21.17■□□□□ 0.98
Clk4-201ENSMUST00000093132 Erc1Q99MI1 1120 aa21.17■□□□□ 0.98
Clk4-201ENSMUST00000093132 1700123L14RikQ3V2K7 440 aa21.17■□□□□ 0.98
Clk4-201ENSMUST00000093132 Nell2Q61220 819 aa21.17■□□□□ 0.98
Clk4-201ENSMUST00000093132 Mb21d2Q8C525 428 aa21.17■□□□□ 0.98
Clk4-201ENSMUST00000093132 CpdO89001 1377 aa21.16■□□□□ 0.98
Clk4-201ENSMUST00000093132 Cyp2c69E9PXC3 491 aa21.16■□□□□ 0.98
Clk4-201ENSMUST00000093132 XpcP51612 930 aa21.16■□□□□ 0.98
Clk4-201ENSMUST00000093132 Cyp2c40P56657 491 aa21.16■□□□□ 0.98
Clk4-201ENSMUST00000093132 GorabQ8BRM2 368 aa21.16■□□□□ 0.98
Clk4-201ENSMUST00000093132 Top1mtQ8R4U6 593 aa21.16■□□□□ 0.98
Clk4-201ENSMUST00000093132 PhaxQ9JJT9 385 aaKnown RBP21.16■□□□□ 0.98
Clk4-201ENSMUST00000093132 Myh7Q91Z83 1935 aa21.16■□□□□ 0.98
Clk4-201ENSMUST00000093132 Usp17lbE9Q9U0 468 aa21.16■□□□□ 0.98
Clk4-201ENSMUST00000093132 Krt40Q6IFX3 439 aa21.16■□□□□ 0.98
Clk4-201ENSMUST00000093132 Spire2Q8K1S6 718 aa21.16■□□□□ 0.98
Clk4-201ENSMUST00000093132 RarsQ9D0I9 660 aaKnown RBP21.16■□□□□ 0.98
Clk4-201ENSMUST00000093132 Sept12Q9D451 317 aa21.16■□□□□ 0.98
Clk4-201ENSMUST00000093132 Col5a2Q3U962 1497 aa21.15■□□□□ 0.98
Clk4-201ENSMUST00000093132 Terf1P70371 421 aa21.15■□□□□ 0.98
Clk4-201ENSMUST00000093132 B4galnt4Q766D5 1034 aa21.15■□□□□ 0.98
Clk4-201ENSMUST00000093132 Appbp2Q9DAX9 585 aa21.15■□□□□ 0.98
Clk4-201ENSMUST00000093132 MecomP14404 1042 aa21.14■□□□□ 0.98
Clk4-201ENSMUST00000093132 Nek11Q8C0Q4 628 aa21.14■□□□□ 0.98
Clk4-201ENSMUST00000093132 Slc44a4Q91VA1 707 aa21.14■□□□□ 0.98
Clk4-201ENSMUST00000093132 NsmfQ99NF2 532 aa21.14■□□□□ 0.98
Clk4-201ENSMUST00000093132 Pmfbp1Q9WVQ0 1022 aa21.14■□□□□ 0.98
Clk4-201ENSMUST00000093132 Rnf123Q5XPI3 1314 aa21.14■□□□□ 0.97
Clk4-201ENSMUST00000093132 Zbtb7aO88939 569 aaKnown RBP21.14■□□□□ 0.97
Clk4-201ENSMUST00000093132 Siah1aP61092 282 aa21.14■□□□□ 0.97
Clk4-201ENSMUST00000093132 Dpf2Q61103 391 aaKnown RBP21.14■□□□□ 0.97
Clk4-201ENSMUST00000093132 MthfsQ9D110 203 aa21.14■□□□□ 0.97
Clk4-201ENSMUST00000093132 Stag1Q9D3E6 1258 aa21.13■□□□□ 0.97
Clk4-201ENSMUST00000093132 Myh13B1AR69 1938 aa21.12■□□□□ 0.97
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms