RNA–Protein interactions for RNA: ENSMUST00000042724.7

Usp38-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 38, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usp38, Length 4,707 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp38-201ENSMUST00000042724 Pik3ap1Q9EQ32 811 aa17.51■□□□□ 0.39
Usp38-201ENSMUST00000042724 Atp8b3Q6UQ17 1335 aa17.51■□□□□ 0.39
Usp38-201ENSMUST00000042724 Tmem2Q5FWI3 1383 aa17.51■□□□□ 0.39
Usp38-201ENSMUST00000042724 Mmel1Q9JLI3 765 aa17.51■□□□□ 0.39
Usp38-201ENSMUST00000042724 Ets1P27577 440 aa17.5■□□□□ 0.39
Usp38-201ENSMUST00000042724 Tsg101Q61187 391 aa17.5■□□□□ 0.39
Usp38-201ENSMUST00000042724 Tacc1Q6Y685 774 aa17.5■□□□□ 0.39
Usp38-201ENSMUST00000042724 Rtn1Q8K0T0 780 aa17.5■□□□□ 0.39
Usp38-201ENSMUST00000042724 Stox1B2RQL2 990 aa17.5■□□□□ 0.39
Usp38-201ENSMUST00000042724 Tekt3Q6X6Z7 490 aa17.5■□□□□ 0.39
Usp38-201ENSMUST00000042724 Larp6Q8BN59 492 aa17.5■□□□□ 0.39
Usp38-201ENSMUST00000042724 Taok3Q8BYC6 898 aa17.5■□□□□ 0.39
Usp38-201ENSMUST00000042724 Cfap73J3QPZ5 306 aa17.5■□□□□ 0.39
Usp38-201ENSMUST00000042724 Myo1bP46735 1107 aa17.5■□□□□ 0.39
Usp38-201ENSMUST00000042724 Ccdc102aQ3TMW1 549 aa17.5■□□□□ 0.39
Usp38-201ENSMUST00000042724 Otud6bQ8K2H2 294 aa17.5■□□□□ 0.39
Usp38-201ENSMUST00000042724 Gm45015A0A140LII9 184 aa17.5■□□□□ 0.39
Usp38-201ENSMUST00000042724 Gm18336A0A140LIU8 765 aa17.5■□□□□ 0.39
Usp38-201ENSMUST00000042724 Gemin5Q8BX17 1502 aaKnown RBP17.5■□□□□ 0.39
Usp38-201ENSMUST00000042724 Adam1aQ60813 791 aa17.49■□□□□ 0.39
Usp38-201ENSMUST00000042724 Paf1Q8K2T8 535 aa17.49■□□□□ 0.39
Usp38-201ENSMUST00000042724 Vps16Q920Q4 839 aa17.49■□□□□ 0.39
Usp38-201ENSMUST00000042724 Knop1Q9Z2Q2 478 aaKnown RBP17.49■□□□□ 0.39
Usp38-201ENSMUST00000042724 Gadd45bP22339 160 aa17.49■□□□□ 0.39
Usp38-201ENSMUST00000042724 Ranbp6Q8BIV3 1105 aa17.49■□□□□ 0.39
Usp38-201ENSMUST00000042724 Pcdhb22Q91XZ8 794 aa17.49■□□□□ 0.39
Usp38-201ENSMUST00000042724 Tmod2Q9JKK7 351 aa17.49■□□□□ 0.39
Usp38-201ENSMUST00000042724 Hdgfl1Q2VPR5 283 aa17.49■□□□□ 0.39
Usp38-201ENSMUST00000042724 Ncaph2Q8BSP2 607 aa17.49■□□□□ 0.39
Usp38-201ENSMUST00000042724 Chd1P40201 1711 aa17.49■□□□□ 0.39
Usp38-201ENSMUST00000042724 Ftl2P49945 183 aa17.49■□□□□ 0.39
Usp38-201ENSMUST00000042724 Iqsec3Q3TES0 1195 aa17.49■□□□□ 0.39
Usp38-201ENSMUST00000042724 Frmd3Q8BHD4 595 aa17.49■□□□□ 0.39
Usp38-201ENSMUST00000042724 Hdac9Q99N13 588 aa17.49■□□□□ 0.39
Usp38-201ENSMUST00000042724 Anxa1P10107 346 aaKnown RBP17.48■□□□□ 0.39
Usp38-201ENSMUST00000042724 ParnQ8VDG3 624 aa17.48■□□□□ 0.39
Usp38-201ENSMUST00000042724 Cdhr2E9Q7P9 1308 aa17.48■□□□□ 0.39
Usp38-201ENSMUST00000042724 CemipQ8BI06 1361 aa17.48■□□□□ 0.39
Usp38-201ENSMUST00000042724 Abcf1Q6P542 837 aaKnown RBP17.48■□□□□ 0.39
Usp38-201ENSMUST00000042724 Snx13Q6PHS6 957 aa17.48■□□□□ 0.39
Usp38-201ENSMUST00000042724 AglF8VPN4 1532 aa17.48■□□□□ 0.39
Usp38-201ENSMUST00000042724 Adamts13Q769J6 1426 aa17.48■□□□□ 0.39
Usp38-201ENSMUST00000042724 PrkcshO08795 521 aa17.47■□□□□ 0.39
Usp38-201ENSMUST00000042724 Smtnl1Q99LM3 459 aa17.47■□□□□ 0.39
Usp38-201ENSMUST00000042724 Ftsj3Q9DBE9 838 aaKnown RBP17.47■□□□□ 0.39
Usp38-201ENSMUST00000042724 ShprhQ7TPQ3 1674 aa17.47■□□□□ 0.39
Usp38-201ENSMUST00000042724 Iqgap3F8VQ29 1632 aa17.47■□□□□ 0.39
Usp38-201ENSMUST00000042724 EspnlQ3UYR4 1005 aa17.47■□□□□ 0.39
Usp38-201ENSMUST00000042724 Ipo4Q8VI75 1082 aa17.47■□□□□ 0.39
Usp38-201ENSMUST00000042724 Olr1Q9EQ09 363 aa17.47■□□□□ 0.39
Usp38-201ENSMUST00000042724 PigbQ9JJQ0 542 aa17.47■□□□□ 0.39
Usp38-201ENSMUST00000042724 Tlr7P58681 1050 aa17.47■□□□□ 0.39
Usp38-201ENSMUST00000042724 Pafah1b1P63005 410 aaKnown RBP17.47■□□□□ 0.39
Usp38-201ENSMUST00000042724 Sptlc2P97363 560 aaKnown RBP17.47■□□□□ 0.39
Usp38-201ENSMUST00000042724 Ankrd23Q812A3 306 aa17.47■□□□□ 0.39
Usp38-201ENSMUST00000042724 Setd1aE9PYH6 1716 aa17.47■□□□□ 0.39
Usp38-201ENSMUST00000042724 Itsn2Q9Z0R6 1659 aa17.47■□□□□ 0.39
Usp38-201ENSMUST00000042724 1700029H14RikE9PY36 240 aa17.46■□□□□ 0.39
Usp38-201ENSMUST00000042724 Cnga2Q62398 664 aa17.46■□□□□ 0.39
Usp38-201ENSMUST00000042724 TrdnE9Q9K5 693 aa17.46■□□□□ 0.39
Usp38-201ENSMUST00000042724 Gm29094F6Q785 221 aa17.46■□□□□ 0.39
Usp38-201ENSMUST00000042724 Prune1Q8BIW1 454 aa17.46■□□□□ 0.39
Usp38-201ENSMUST00000042724 Pcdhb5Q91XZ5 792 aa17.46■□□□□ 0.39
Usp38-201ENSMUST00000042724 Pard3Q99NH2 1333 aa17.46■□□□□ 0.39
Usp38-201ENSMUST00000042724 Myl3P09542 204 aa17.46■□□□□ 0.39
Usp38-201ENSMUST00000042724 Plbd2Q3TCN2 594 aa17.46■□□□□ 0.39
Usp38-201ENSMUST00000042724 Fchsd1Q6PFY1 688 aa17.46■□□□□ 0.39
Usp38-201ENSMUST00000042724 Clip2Q9Z0H8 1047 aa17.46■□□□□ 0.39
Usp38-201ENSMUST00000042724 Ccdc82Q6PG04 518 aa17.45■□□□□ 0.38
Usp38-201ENSMUST00000042724 HmcesQ8R1M0 353 aaKnown RBP17.45■□□□□ 0.38
Usp38-201ENSMUST00000042724 9230110C19RikQ8CC70 267 aa17.45■□□□□ 0.38
Usp38-201ENSMUST00000042724 TxlnbQ8VBT1 685 aa17.45■□□□□ 0.38
Usp38-201ENSMUST00000042724 Prdm11A2AGX3 565 aa17.45■□□□□ 0.38
Usp38-201ENSMUST00000042724 Fam13bQ8K2H3 851 aa17.45■□□□□ 0.38
Usp38-201ENSMUST00000042724 Mrvi1Q9WUX5 899 aaKnown RBP17.45■□□□□ 0.38
Usp38-201ENSMUST00000042724 ItpripQ3TNL8 555 aa17.45■□□□□ 0.38
Usp38-201ENSMUST00000042724 Terf2ipQ91VL8 393 aa17.45■□□□□ 0.38
Usp38-201ENSMUST00000042724 Ercc6l2Q9JIM3 1537 aa17.44■□□□□ 0.38
Usp38-201ENSMUST00000042724 Prl3d1P18121 224 aa17.44■□□□□ 0.38
Usp38-201ENSMUST00000042724 1700006A11RikB9EHI3 544 aa17.44■□□□□ 0.38
Usp38-201ENSMUST00000042724 Cacna2d4Q5RJF7 1116 aa17.44■□□□□ 0.38
Usp38-201ENSMUST00000042724 Tmx3Q8BXZ1 456 aa17.44■□□□□ 0.38
Usp38-201ENSMUST00000042724 Tsr2Q8C8T8 191 aa17.44■□□□□ 0.38
Usp38-201ENSMUST00000042724 SltmQ8CH25 1031 aaKnown RBP17.44■□□□□ 0.38
Usp38-201ENSMUST00000042724 Erich4Q3UNU4 136 aa17.43■□□□□ 0.38
Usp38-201ENSMUST00000042724 Tgfb1i1Q62219 461 aa17.43■□□□□ 0.38
Usp38-201ENSMUST00000042724 Zcrb1Q9CZ96 217 aaKnown RBP17.43■□□□□ 0.38
Usp38-201ENSMUST00000042724 Nid2O88322 1403 aa17.43■□□□□ 0.38
Usp38-201ENSMUST00000042724 Hecw2Q6I6G8 1578 aa17.43■□□□□ 0.38
Usp38-201ENSMUST00000042724 Cfap157Q0VFX2 523 aa17.43■□□□□ 0.38
Usp38-201ENSMUST00000042724 Ift122Q6NWV3 1182 aa17.43■□□□□ 0.38
Usp38-201ENSMUST00000042724 Msl1Q6PDM1 616 aa17.43■□□□□ 0.38
Usp38-201ENSMUST00000042724 Atp2b4Q6Q477 1205 aa17.43■□□□□ 0.38
Usp38-201ENSMUST00000042724 Ndufa8Q9DCJ5 172 aa17.43■□□□□ 0.38
Usp38-201ENSMUST00000042724 Pkd2l2Q9JLG4 621 aa17.43■□□□□ 0.38
Usp38-201ENSMUST00000042724 Iqgap1Q9JKF1 1657 aaKnown RBP17.43■□□□□ 0.38
Usp38-201ENSMUST00000042724 Ift57Q8BXG3 429 aa17.43■□□□□ 0.38
Usp38-201ENSMUST00000042724 InsrrQ9WTL4 1300 aa17.43■□□□□ 0.38
Usp38-201ENSMUST00000042724 Mapkapk5O54992 473 aa17.43■□□□□ 0.38
Usp38-201ENSMUST00000042724 Ccdc122Q8BVN0 290 aa17.43■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms