RNA–Protein interactions for RNA: ENSMUST00000032168.6

Sec61a1-201, Transcript of Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sec61a1, Length 3,172 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1-201ENSMUST00000032168 Igbp1bQ9QZ29 343 aa19.92■□□□□ 0.78
Sec61a1-201ENSMUST00000032168 Sept1P42209 366 aa19.91■□□□□ 0.78
Sec61a1-201ENSMUST00000032168 Pram1Q6BCL1 675 aa19.91■□□□□ 0.78
Sec61a1-201ENSMUST00000032168 Ppil4Q9CXG3 492 aaKnown RBP19.91■□□□□ 0.78
Sec61a1-201ENSMUST00000032168 Tom1O88746 492 aa19.91■□□□□ 0.78
Sec61a1-201ENSMUST00000032168 Zfp317Q8C0Q5 607 aa19.91■□□□□ 0.78
Sec61a1-201ENSMUST00000032168 Atad2Q8CDM1 1040 aa19.91■□□□□ 0.78
Sec61a1-201ENSMUST00000032168 Appbp2Q9DAX9 585 aa19.91■□□□□ 0.78
Sec61a1-201ENSMUST00000032168 Greb1lB9EJV3 1913 aa19.91■□□□□ 0.78
Sec61a1-201ENSMUST00000032168 Pla2g4fQ50L41 855 aa19.91■□□□□ 0.78
Sec61a1-201ENSMUST00000032168 Slc38a10Q5I012 1090 aa19.91■□□□□ 0.78
Sec61a1-201ENSMUST00000032168 Pm20d1Q8C165 503 aa19.91■□□□□ 0.78
Sec61a1-201ENSMUST00000032168 Med4Q9CQA5 270 aa19.91■□□□□ 0.78
Sec61a1-201ENSMUST00000032168 Kdm3aQ6PCM1 1323 aa19.9■□□□□ 0.78
Sec61a1-201ENSMUST00000032168 Fbxl16A2RT62 479 aa19.9■□□□□ 0.78
Sec61a1-201ENSMUST00000032168 Nwd2Q6P5U7 1742 aa19.9■□□□□ 0.78
Sec61a1-201ENSMUST00000032168 Limch1Q3UH68 1057 aa19.9■□□□□ 0.78
Sec61a1-201ENSMUST00000032168 Alg3Q8K2A8 438 aa19.9■□□□□ 0.78
Sec61a1-201ENSMUST00000032168 Kcnq5Q9JK45 933 aa19.9■□□□□ 0.78
Sec61a1-201ENSMUST00000032168 Vmn2r23E9PXI5 849 aa19.89■□□□□ 0.78
Sec61a1-201ENSMUST00000032168 Polr3gQ6NXY9 223 aa19.89■□□□□ 0.78
Sec61a1-201ENSMUST00000032168 Spata31d1bE9QA57 1361 aa19.89■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Fkbp1aP26883 108 aaKnown RBP19.89■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Pank2Q3U4S0 443 aa19.89■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Plekhf1Q3TB82 279 aa19.89■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Prdm1Q60636 856 aa19.89■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Ift57Q8BXG3 429 aa19.89■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 NgdnQ9DB96 315 aaKnown RBP19.89■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Sil1Q9EPK6 465 aa19.89■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Zfp51Q3U4L8 781 aa19.88■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Plcd1Q8R3B1 756 aa19.88■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Col22a1E9Q7P1 1613 aa19.88■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Fer1l6E0CZ42 1862 aa19.88■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Ppp4r3bQ922R5 820 aa19.88■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Sik3Q6P4S6 1311 aa19.88■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 BrapQ99MP8 591 aa19.87■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Rgs9O54828 675 aa19.87■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Smarcc2Q6PDG5 1213 aa19.87■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Tubb6Q922F4 447 aa19.87■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Prl3d1P18121 224 aa19.87■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Sgsm1Q8BPQ7 1093 aa19.87■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Cnot6lQ8VEG6 555 aa19.87■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Utp3Q9JI13 469 aaKnown RBP19.87■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Plekho1Q9JIY0 408 aa19.87■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Mapk8ip1Q9WVI9 707 aa19.87■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Pcdhb9E9Q5G2 828 aa19.86■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Snx13Q6PHS6 957 aa19.86■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Rufy2Q8R4C2 606 aa19.86■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 IcoslgQ9JHJ8 322 aa19.86■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Tmem59lQ7TNI2 337 aa19.86■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 CrebrfQ8CDG5 640 aaKnown RBP19.86■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 CpvlQ9D3S9 478 aa19.86■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Ube3bQ9ES34 1070 aa19.86■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Dhx16G3X8X0 1044 aaKnown RBP19.85■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Plbd2Q3TCN2 594 aa19.85■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Ufl1Q8CCJ3 793 aaKnown RBP19.85■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Srgap1Q91Z69 1062 aa19.85■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Snrpa1P57784 255 aaKnown RBP19.85■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Pald1P70261 859 aa19.85■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Mrpl44Q9CY73 333 aaKnown RBP19.85■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Krt85Q9Z2T6 507 aa19.85■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 4931408C20RikE9PWP9 1381 aa19.85■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Znf496Q5SXI5 585 aa19.85■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Ncaph2Q8BSP2 607 aa19.85■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Slc39a11Q8BWY7 342 aa19.85■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Ipo4Q8VI75 1082 aa19.85■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Kansl3A2RSY1 903 aaKnown RBP19.84■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Cfap73J3QPZ5 306 aa19.84■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Usp28Q5I043 1051 aa19.84■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Kndc1Q0KK55 1742 aa19.84■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Tmem143Q8VD26 458 aa19.84■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Myh7Q91Z83 1935 aa19.84■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Lins1Q3U1D0 764 aa19.83■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Myl10Q62082 202 aa19.83■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Bicd2Q921C5 820 aa19.83■□□□□ 0.77
Sec61a1-201ENSMUST00000032168 Zbtb7aO88939 569 aaKnown RBP19.83■□□□□ 0.76
Sec61a1-201ENSMUST00000032168 Washc4Q3UMB9 1173 aa19.83■□□□□ 0.76
Sec61a1-201ENSMUST00000032168 Ccdc82Q6PG04 518 aa19.83■□□□□ 0.76
Sec61a1-201ENSMUST00000032168 Ces1dQ8VCT4 565 aa19.83■□□□□ 0.76
Sec61a1-201ENSMUST00000032168 Mroh6V9GX81 722 aa19.83■□□□□ 0.76
Sec61a1-201ENSMUST00000032168 Kat6bQ8BRB7 1872 aa19.83■□□□□ 0.76
Sec61a1-201ENSMUST00000032168 Setdb1O88974 1307 aa19.83■□□□□ 0.76
Sec61a1-201ENSMUST00000032168 Lipo1J3QME6 396 aa19.83■□□□□ 0.76
Sec61a1-201ENSMUST00000032168 Cep55Q8BT07 462 aa19.83■□□□□ 0.76
Sec61a1-201ENSMUST00000032168 Riok1Q922Q2 567 aa19.83■□□□□ 0.76
Sec61a1-201ENSMUST00000032168 Carmil3Q3UFQ8 1375 aa19.82■□□□□ 0.76
Sec61a1-201ENSMUST00000032168 Krt24A1L317 512 aa19.82■□□□□ 0.76
Sec61a1-201ENSMUST00000032168 Casp1P29452 402 aa19.82■□□□□ 0.76
Sec61a1-201ENSMUST00000032168 Smarcc1P97496 1104 aa19.82■□□□□ 0.76
Sec61a1-201ENSMUST00000032168 Zc3h12cQ5DTV4 884 aa19.82■□□□□ 0.76
Sec61a1-201ENSMUST00000032168 Fsd2Q8BZ52 692 aa19.82■□□□□ 0.76
Sec61a1-201ENSMUST00000032168 CerkQ8K4Q7 531 aa19.82■□□□□ 0.76
Sec61a1-201ENSMUST00000032168 Atp8b3Q6UQ17 1335 aa19.82■□□□□ 0.76
Sec61a1-201ENSMUST00000032168 Golgb1E9PVZ8 3238 aa19.82■□□□□ 0.76
Sec61a1-201ENSMUST00000032168 CltaO08585 235 aa19.82■□□□□ 0.76
Sec61a1-201ENSMUST00000032168 Gm4340L7N2C4 268 aa19.81■□□□□ 0.76
Sec61a1-201ENSMUST00000032168 Col3a1P08121 1464 aa19.81■□□□□ 0.76
Sec61a1-201ENSMUST00000032168 Stox1B2RQL2 990 aa19.81■□□□□ 0.76
Sec61a1-201ENSMUST00000032168 Snai1Q02085 264 aa19.81■□□□□ 0.76
Sec61a1-201ENSMUST00000032168 Speer4dL7N216 212 aa19.81■□□□□ 0.76
Retrieved 100 of 22,080 RNA–protein pairs in 33 ms