RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 Gm7903A2AWL1 463 aa20.82■□□□□ 0.92
Ptpra-201ENSMUST00000028769 AV320801A2AWL3 467 aa20.82■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Gm15023L7MUB4 467 aa20.82■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Cfap99A0A140LIX9 648 aa20.82■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Acnat2Q8BGG9 420 aa20.82■□□□□ 0.92
Ptpra-201ENSMUST00000028769 DymQ8CHY3 669 aa20.82■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Ccnl1Q52KE7 532 aaKnown RBP20.81■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Tsen34Q8BMZ5 316 aa20.81■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Ccz1Q8C1Y8 480 aa20.81■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Rgs9O54828 675 aa20.81■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Frat1P70339 274 aa20.81■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Gsdma2Q32M21 443 aa20.81■□□□□ 0.92
Ptpra-201ENSMUST00000028769 RubcnlQ3TD16 648 aa20.81■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Osbpl5Q9ER64 874 aa20.81■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Cdkn1cP49919 348 aa20.8■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Ubxn4Q8VCH8 506 aa20.8■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Zfp251Q6PCX8 632 aa20.8■□□□□ 0.92
Ptpra-201ENSMUST00000028769 BccipQ9CWI3 316 aa20.8■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Arap3Q8R5G7 1538 aa20.8■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Kcna6Q61923 529 aa20.8■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Mtmr3Q8K296 1196 aa20.8■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Dhx30Q99PU8 1217 aaKnown RBP20.8■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Nbr1P97432 988 aa20.79■□□□□ 0.92
Ptpra-201ENSMUST00000028769 TfrcQ62351 763 aaKnown RBP20.79■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Fsd2Q8BZ52 692 aa20.79■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Kcnk13Q8R1P5 405 aa20.79■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Slu7Q8BHJ9 585 aa20.79■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Zkscan8Q8BSL0 588 aa20.79■□□□□ 0.92
Ptpra-201ENSMUST00000028769 LyarQ08288 388 aaKnown RBP20.78■□□□□ 0.92
Ptpra-201ENSMUST00000028769 L1td1Q587J6 782 aaKnown RBP20.78■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Cep55Q8BT07 462 aa20.78■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Emilin1Q99K41 1017 aa20.78■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Usp42B2RQC2 1324 aaKnown RBP20.78■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Aox4Q3TYQ9 1336 aa20.78■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Tlcd1Q99JT6 247 aa20.78■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Fam213aQ9CYH2 218 aa20.78■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Zscan29E9Q5B4 869 aa20.78■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Tmx1Q8VBT0 278 aa20.78■□□□□ 0.92
Ptpra-201ENSMUST00000028769 XpcP51612 930 aa20.77■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Nlrp1aQ2LKU9 1182 aa20.77■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Ppp4r3aQ6P2K6 820 aa20.77■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Ttc27Q8CD92 847 aa20.77■□□□□ 0.92
Ptpra-201ENSMUST00000028769 ApobrQ8VBT6 942 aa20.77■□□□□ 0.92
Ptpra-201ENSMUST00000028769 BrapQ99MP8 591 aa20.77■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Col4a3bpQ9EQG9 624 aa20.77■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Cplx1P63040 134 aa20.77■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Cnot6lQ8VEG6 555 aa20.77■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Nid2O88322 1403 aa20.76■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Snw1Q9CSN1 536 aaKnown RBP20.76■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Nip7Q9CXK8 180 aaKnown RBP20.76■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Ifi35Q9D8C4 286 aa20.76■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Stx1aO35526 288 aa20.76■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Luzp1Q8R4U7 1068 aaKnown RBP20.76■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Bmp2kQ91Z96 1138 aa20.76■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Shisa4Q8CA71 197 aa20.76■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Me1P06801 572 aa20.75■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Gpr182P43142 395 aa20.75■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Tnnt2P50752 301 aa20.75■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Exosc10P56960 887 aaKnown RBP20.75■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Ano10Q8BH79 659 aa20.75■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Irx4Q9QY61 515 aa20.75■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Dnm1P39053 867 aa20.75■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Smarcc2Q6PDG5 1213 aa20.75■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Asap2Q7SIG6 958 aa20.75■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Ccdc94Q9D6J3 314 aa20.75■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Tubb6Q922F4 447 aa20.74■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Col4a1P02463 1669 aa20.74■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Pram1Q6BCL1 675 aa20.74■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Slfnl1Q8BHW9 410 aa20.74■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Abl1P00520 1123 aa20.74■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Ddx27Q921N6 760 aaKnown RBP20.74■□□□□ 0.91
Ptpra-201ENSMUST00000028769 AK157302I3ITR1 129 aa20.73■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Lrrc8aQ80WG5 810 aa20.73■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Isca1Q9D924 129 aa20.73■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Clec11aO88200 328 aa20.73■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Ftl2P49945 183 aa20.73■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Ube2oQ6ZPJ3 1288 aa20.73■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Tmem59lQ7TNI2 337 aa20.73■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Q8BZJ8 459 aa20.73■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Pla2g4fQ50L41 855 aa20.72■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Golgb1E9PVZ8 3238 aa20.72■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Col14a1Q80X19 1797 aa20.72■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Prl3d2F6R3P9 224 aa20.72■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Zkscan4Q5SZT6 480 aa20.72■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Cep135Q6P5D4 1140 aa20.72■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Rec8Q8C5S7 591 aa20.72■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Atad2Q8CDM1 1040 aa20.72■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Lipo1J3QME6 396 aa20.72■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Llgl2Q3TJ91 1027 aa20.72■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Dhx40Q6PE54 779 aaKnown RBP20.72■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Dnaaf2Q8BPI1 814 aa20.72■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Ddx54Q8K4L0 874 aaKnown RBP20.72■□□□□ 0.91
Ptpra-201ENSMUST00000028769 TrdnE9Q9K5 693 aa20.71■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Sptlc2P97363 560 aaKnown RBP20.71■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Prpf4bQ61136 1007 aaKnown RBP20.71■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Znf653Q6YND2 615 aa20.71■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Ift57Q8BXG3 429 aa20.71■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Large1Q9Z1M7 756 aa20.71■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Robo1O89026 1612 aa20.71■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Tpm3P21107 285 aaKnown RBP20.71■□□□□ 0.91
Retrieved 100 of 22,080 RNA–protein pairs in 41.8 ms