RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Saal1Q9D2C2 474 aa5.18□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Gm1979E9QAN3 267 aa5.18□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Atp8b2P98199 1209 aa5.18□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Syap1Q9D5V6 365 aa5.18□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Kif13aQ9EQW7 1749 aa5.18□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Gm28510A0A087WP28 240 aa5.18□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Kcnh8P59111 1102 aa5.18□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ccdc42Q5SV66 316 aa5.18□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Srgap1Q91Z69 1062 aa5.18□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Bloc1s2Q9CWG9 143 aa5.18□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Tmco5aQ9D9D5 303 aa5.18□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Gm6588E9Q3K0 461 aa5.18□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Slc30a9Q5IRJ6 567 aa5.18□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ccdc7Q9D541 371 aa5.18□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Spc25Q3UA16 226 aa5.18□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Fkbp5Q64378 456 aa5.18□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Swap70Q6A028 585 aaKnown RBP5.18□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Vps37dQ810I0 261 aa5.18□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Cadps2Q8BYR5 1297 aa5.18□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Map3k9Q3U1V8 1077 aa5.18□□□□□ -1.58
Prkdc-201ENSMUST00000023352 BrapQ99MP8 591 aa5.18□□□□□ -1.58
Prkdc-201ENSMUST00000023352 PtprmP28828 1452 aa5.18□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Trim6Q8BGE7 488 aa5.18□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Prpf31Q8CCF0 499 aaKnown RBP5.18□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Tubgcp6G5E8P0 1769 aa5.18□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ranbp1P34022 203 aaKnown RBP5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 TbcaP48428 108 aaKnown RBP5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Sox12Q04890 314 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Apol7cQ8C6E1 369 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Cdk5rap2Q8K389 1822 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Usp5P56399 858 aaKnown RBP5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 MlecQ6ZQI3 291 aaKnown RBP5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Vps18Q8R307 973 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ccar2Q8VDP4 922 aaKnown RBP5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Bag3Q9JLV1 577 aaKnown RBP5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Il4rP16382 810 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Senp1P59110 640 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Rassf10Q8BL43 508 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Nek11Q8C0Q4 628 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Luzp1Q8R4U7 1068 aaKnown RBP5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Atp1a4Q9WV27 1032 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Trove2O08848 538 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Krt8P11679 490 aaKnown RBP5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Abcd1P48410 736 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Naa25Q8BWZ3 972 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Zfp42P22227 288 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Irf9Q61179 399 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ddx27Q921N6 760 aaKnown RBP5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Armc9Q9D2I5 817 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Myh6Q02566 1938 aaKnown RBP5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Slit2Q9R1B9 1521 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Fchsd1Q6PFY1 688 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 SltmQ8CH25 1031 aaKnown RBP5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Setdb1O88974 1307 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Catsper2A2ARP9 588 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Mcm6P97311 821 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Gjb2Q00977 226 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Smg7Q5RJH6 1138 aaKnown RBP5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Krt25Q8VCW2 446 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Gm11983V9GXS8 105 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Simc1E9Q6E9 1354 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Oas2E9Q9A9 742 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ddx49Q4FZF3 480 aaKnown RBP5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ccdc25Q78PG9 208 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Iffo1Q8BXL9 562 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Msantd4Q91YU3 345 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ppp6r3Q922D4 844 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Mrpl40Q9Z2Q5 206 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Trim25Q61510 634 aaKnown RBP5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Rbm26Q6NZN0 1012 aaKnown RBP5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Pnpla2Q8BJ56 486 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Traf3ip3Q8C0G2 513 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Akap8Q9DBR0 687 aaKnown RBP5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Cacna2d3Q9Z1L5 1091 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Gm10563F6WIE4 79 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ddx42Q810A7 929 aaKnown RBP5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Samm50Q8BGH2 469 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Gramd4Q8CB44 633 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ccdc150Q8CDI7 1110 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Brf1Q8CFK2 676 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Gbp2Q9Z0E6 589 aa5.17□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ccdc6D3YZP9 469 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Ube3aO08759 870 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Prim1P20664 417 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Cul5Q9D5V5 780 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Calr3Q9D9Q6 380 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Sem1P60897 70 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 4921504E06RikQ8CET2 560 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 SfpqQ8VIJ6 699 aaKnown RBP5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Tacc1Q6Y685 774 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Eif4a2P10630 407 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Cep55Q8BT07 462 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Homer1Q9Z2Y3 366 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Rnf123Q5XPI3 1314 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Tyro3P55144 880 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Golga1Q9CW79 758 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Zfp651E9PZ11 729 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Usp35M0QWN7 1009 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Grm8P47743 908 aa5.16□□□□□ -1.58
Prkdc-201ENSMUST00000023352 Mum1l1Q4VA55 681 aa5.16□□□□□ -1.58
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms