RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Jakmip2D3YXK0 820 aa19.68■□□□□ 0.74
Ctcf-201ENSMUST00000005841 Acsbg1Q99PU5 721 aa19.68■□□□□ 0.74
Ctcf-201ENSMUST00000005841 Klra4Q60651 263 aa19.67■□□□□ 0.74
Ctcf-201ENSMUST00000005841 Nxf7Q80SZ6 620 aaKnown RBP19.67■□□□□ 0.74
Ctcf-201ENSMUST00000005841 Alg3Q8K2A8 438 aa19.67■□□□□ 0.74
Ctcf-201ENSMUST00000005841 Mrvi1Q9WUX5 899 aaKnown RBP19.67■□□□□ 0.74
Ctcf-201ENSMUST00000005841 Eif3aP23116 1344 aaKnown RBP19.67■□□□□ 0.74
Ctcf-201ENSMUST00000005841 Ktn1Q61595 1327 aaKnown RBP19.67■□□□□ 0.74
Ctcf-201ENSMUST00000005841 Myo3bQ1EG27 1305 aa19.67■□□□□ 0.74
Ctcf-201ENSMUST00000005841 DbnlQ62418 436 aa19.67■□□□□ 0.74
Ctcf-201ENSMUST00000005841 Mrpl44Q9CY73 333 aaKnown RBP19.67■□□□□ 0.74
Ctcf-201ENSMUST00000005841 Col3a1P08121 1464 aa19.67■□□□□ 0.74
Ctcf-201ENSMUST00000005841 Sipa1l3G3X9J0 1776 aa19.66■□□□□ 0.74
Ctcf-201ENSMUST00000005841 Map3k13Q1HKZ5 959 aa19.66■□□□□ 0.74
Ctcf-201ENSMUST00000005841 Hook1Q8BIL5 728 aa19.66■□□□□ 0.74
Ctcf-201ENSMUST00000005841 Rhot2Q8JZN7 620 aa19.66■□□□□ 0.74
Ctcf-201ENSMUST00000005841 Hps3Q91VB4 1002 aa19.66■□□□□ 0.74
Ctcf-201ENSMUST00000005841 Rai14Q9EP71 979 aaKnown RBP19.66■□□□□ 0.74
Ctcf-201ENSMUST00000005841 Ythdc1E9Q5K9 736 aaKnown RBP19.66■□□□□ 0.74
Ctcf-201ENSMUST00000005841 Atp8b5A3FIN4 1183 aa19.65■□□□□ 0.74
Ctcf-201ENSMUST00000005841 Fhod1Q6P9Q4 1197 aa19.65■□□□□ 0.74
Ctcf-201ENSMUST00000005841 Nop2Q922K7 793 aaKnown RBP19.65■□□□□ 0.74
Ctcf-201ENSMUST00000005841 Map7d2A2AG50 781 aa19.65■□□□□ 0.74
Ctcf-201ENSMUST00000005841 Grm8P47743 908 aa19.65■□□□□ 0.74
Ctcf-201ENSMUST00000005841 Kri1Q8VDQ9 704 aaKnown RBP19.65■□□□□ 0.74
Ctcf-201ENSMUST00000005841 Cfdp1O88271 295 aaKnown RBP19.64■□□□□ 0.74
Ctcf-201ENSMUST00000005841 Cd37Q61470 281 aa19.64■□□□□ 0.74
Ctcf-201ENSMUST00000005841 Ctnna3Q65CL1 895 aa19.64■□□□□ 0.74
Ctcf-201ENSMUST00000005841 Magi2Q9WVQ1 1275 aa19.64■□□□□ 0.74
Ctcf-201ENSMUST00000005841 Slc26a8Q8R0C3 999 aa19.64■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Mphosph10Q810V0 681 aaKnown RBP19.64■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Actn3O88990 900 aaKnown RBP19.63■□□□□ 0.73
Ctcf-201ENSMUST00000005841 R3hcc1Q8BSI6 488 aa19.63■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Ddx27Q921N6 760 aaKnown RBP19.63■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Abcb6Q9DC29 842 aa19.63■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Nbr1P97432 988 aa19.63■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Adck5Q80V03 582 aa19.63■□□□□ 0.73
Ctcf-201ENSMUST00000005841 BrapQ99MP8 591 aa19.63■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Myo1aO88329 1043 aa19.63■□□□□ 0.73
Ctcf-201ENSMUST00000005841 RargP18911 458 aaKnown RBP19.63■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Col4a1P02463 1669 aa19.63■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Lrp6O88572 1613 aa19.62■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Gm43638A0A0J9YU36 694 aa19.62■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Plcb3P51432 1234 aaKnown RBP19.62■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Ppp1r37Q8BKR5 712 aa19.62■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Gsdma3Q5Y4Y6 464 aa19.62■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Lrrfip2Q91WK0 415 aa19.62■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Clic4Q9QYB1 253 aa19.62■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Golga5Q9QYE6 729 aa19.62■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Prl7a2O54831 253 aa19.61■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Dctpp1Q9QY93 170 aa19.61■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Asnsd1Q8BFS9 627 aa19.61■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Pola2P33611 600 aa19.61■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Vnn1Q9Z0K8 512 aa19.61■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Dhx8A2A4P0 1244 aaKnown RBP19.6■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Slc1a4O35874 532 aa19.6■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Fam76aQ922G2 307 aa19.6■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Rrs1Q9CYH6 365 aaKnown RBP19.6■□□□□ 0.73
Ctcf-201ENSMUST00000005841 InsrrQ9WTL4 1300 aa19.6■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Tmem59lQ7TNI2 337 aa19.6■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Wdr3Q8BHB4 942 aaKnown RBP19.6■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Efcab8Q8C9R9 203 aa19.6■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Atad2Q8CDM1 1040 aa19.6■□□□□ 0.73
Ctcf-201ENSMUST00000005841 EmbP21995 330 aa19.59■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Usp5P56399 858 aaKnown RBP19.59■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Large1Q9Z1M7 756 aa19.59■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Ncoa7Q6DFV7 943 aa19.59■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Tmem132eQ6IEE6 982 aa19.59■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Cct8l1Q80YT3 562 aa19.59■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Arl8aQ8VEH3 186 aa19.59■□□□□ 0.73
Ctcf-201ENSMUST00000005841 GckrQ91X44 587 aa19.59■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Yeats4Q9CR11 227 aaKnown RBP19.59■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Arap2Q8BZ05 1703 aa19.58■□□□□ 0.73
Ctcf-201ENSMUST00000005841 LtkP08923 888 aa19.58■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Mctp2Q5RJH2 878 aa19.58■□□□□ 0.73
Ctcf-201ENSMUST00000005841 Myh13B1AR69 1938 aa19.58■□□□□ 0.73
Ctcf-201ENSMUST00000005841 PsdQ5DTT2 1024 aa19.58■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Ccdc82Q6PG04 518 aa19.58■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Myh7bA2AQP0 1941 aa19.58■□□□□ 0.72
Ctcf-201ENSMUST00000005841 NpeppsQ11011 920 aa19.58■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Irf9Q61179 399 aa19.58■□□□□ 0.72
Ctcf-201ENSMUST00000005841 SympkQ80X82 1284 aa19.58■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Dpf2Q61103 391 aaKnown RBP19.57■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Ehd2Q8BH64 543 aa19.57■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Abcf1Q6P542 837 aaKnown RBP19.57■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Thsd7aQ69ZU6 1645 aa19.57■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Rbbp8nlA2ABX0 614 aa19.57■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Tpm4Q6IRU2 248 aa19.57■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Plppr3Q7TPB0 716 aa19.57■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Ccdc158Q8CDI6 1109 aa19.57■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Luzp1Q8R4U7 1068 aaKnown RBP19.57■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Usp42B2RQC2 1324 aaKnown RBP19.57■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Akap11E9Q777 1895 aa19.56■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Btn2a2A4QPC6 514 aa19.56■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Marf1Q8BJ34 1730 aaKnown RBP19.56■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Tnnt1O88346 262 aa19.56■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Ankrd1Q9CR42 319 aa19.56■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Tns2Q8CGB6 1400 aa19.56■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Shank3Q4ACU6 1730 aa19.56■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Irgm2A0A140LIF8 407 aa19.56■□□□□ 0.72
Retrieved 100 of 22,080 RNA–protein pairs in 34 ms