RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Sipa1l3G3X9J0 1776 aa21.96■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Trim30aP15533 496 aa21.96■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Ppfia3P60469 1194 aa21.96■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Trim56Q80VI1 734 aaKnown RBP21.96■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Dnaaf2Q8BPI1 814 aa21.96■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Ccz1Q8C1Y8 480 aa21.96■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Ccdc94Q9D6J3 314 aa21.96■■□□□ 1.11
Shkbp1-201ENSMUST00000003857 Mctp2Q5RJH2 878 aa21.95■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 AbraQ8BUZ1 375 aa21.95■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Gys2Q8VCB3 704 aa21.95■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Col4a3bpQ9EQG9 624 aa21.95■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Shank3Q4ACU6 1730 aa21.95■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Nxf2Q4ZGD8 691 aa21.95■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Tmem67Q8BR76 992 aa21.95■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Fam213aQ9CYH2 218 aa21.95■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Dusp10Q9ESS0 483 aa21.95■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Gpatch11Q3UFS4 262 aa21.94■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Zpr1Q62384 459 aa21.94■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Gpatch3Q8BIY1 525 aa21.94■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Ccdc82Q6PG04 518 aa21.94■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Atp1a3Q6PIC6 1013 aa21.94■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Zfp251Q6PCX8 632 aa21.93■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Shisa4Q8CA71 197 aa21.93■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 TnksQ6PFX9 1320 aa21.93■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Carmil3Q3UFQ8 1375 aa21.93■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Tnrc6cQ3UHC0 1690 aaKnown RBP21.93■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Gm29094F6Q785 221 aa21.92■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Ercc3P49135 783 aa21.92■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 CtifQ6PEE2 600 aaKnown RBP21.92■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 CrebrfQ8CDG5 640 aaKnown RBP21.92■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 MthfsQ9D110 203 aa21.92■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Myh7Q91Z83 1935 aa21.92■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Sall1Q9ER74 1322 aa21.92■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Spty2d1Q68FG3 682 aa21.92■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Sass6Q80UK7 654 aa21.92■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Alg3Q8K2A8 438 aa21.92■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Naa16Q9DBB4 864 aa21.92■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Wdr19Q3UGF1 1341 aa21.92■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Gm21680A0A0G2JGR8 267 aa21.91■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Pald1P70261 859 aa21.91■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 LyarQ08288 388 aaKnown RBP21.91■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Ano10Q8BH79 659 aa21.91■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Ppp4r3bQ922R5 820 aa21.91■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Dhx40Q6PE54 779 aaKnown RBP21.91■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Terf2ipQ91VL8 393 aa21.91■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Tcof1O08784 1320 aaKnown RBP21.91■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Kcnk13Q8R1P5 405 aa21.9■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Nlrp3Q8R4B8 1033 aa21.9■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Casz1Q9CWL2 1761 aa21.9■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Cyp3a57D3YYZ0 503 aa21.9■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Vmn2r23E9PXI5 849 aa21.89■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Atp2b1G5E829 1220 aa21.89■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Ankib1Q6ZPS6 1085 aa21.89■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Ttc19Q8CC21 365 aa21.89■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Golph3lQ8R088 285 aaKnown RBP21.89■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Ncoa5Q91W39 579 aaKnown RBP21.89■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Ccer1Q9CQL2 403 aa21.89■■□□□ 1.1
Shkbp1-201ENSMUST00000003857 Sik3Q6P4S6 1311 aa21.89■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Hand2Q61039 217 aa21.89■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Telo2Q9DC40 840 aaKnown RBP21.89■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Cfap99A0A140LIX9 648 aa21.88■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Tmem59lQ7TNI2 337 aa21.88■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Ints4Q8CIM8 964 aa21.88■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Lrrc8aQ80WG5 810 aa21.88■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Arap2Q8BZ05 1703 aa21.88■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 U2af1l4Q8BGJ9 220 aa21.87■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Arid5bQ8BM75 1188 aaKnown RBP21.87■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Hnrnpul1Q8VDM6 859 aaKnown RBP21.87■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Cnpy2Q9QXT0 182 aa21.87■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Slu7Q8BHJ9 585 aa21.87■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Q8BZJ8 459 aa21.87■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Col3a1P08121 1464 aa21.86■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Ube2oQ6ZPJ3 1288 aa21.86■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Map10Q8BJS7 891 aa21.86■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Txnrd1Q9JMH6 613 aa21.86■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Kdm3aQ6PCM1 1323 aa21.86■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Pramel3A2AHA7 463 aa21.85■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Gm7903A2AWL1 463 aa21.85■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 AV320801A2AWL3 467 aa21.85■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Gm15023L7MUB4 467 aa21.85■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 TsksO54887 585 aa21.85■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Zkscan4Q5SZT6 480 aa21.85■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Srek1Q8BZX4 494 aaKnown RBP21.85■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 SdsQ8VBT2 327 aa21.85■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Gm12185Q5NCB2 835 aa21.85■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Appbp2Q9DAX9 585 aa21.85■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Clic4Q9QYB1 253 aa21.85■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Cdc45Q9Z1X9 566 aa21.85■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 XpcP51612 930 aa21.84■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 MlecQ6ZQI3 291 aaKnown RBP21.84■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Dnaaf4Q8R368 420 aa21.84■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Mei1Q9D4I2 1268 aa21.84■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 PappaQ8R4K8 1624 aa21.84■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 ImmtQ8CAQ8 757 aaKnown RBP21.84■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 IncenpQ9WU62 880 aa21.84■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Tulp1Q9Z273 543 aa21.84■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Ms4a1P19437 291 aa21.83■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Ftl2P49945 183 aa21.83■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Clca2Q8BG22 942 aa21.83■■□□□ 1.09
Shkbp1-201ENSMUST00000003857 Mylk2Q8VCR8 613 aa21.83■■□□□ 1.09
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms