RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 SEMA6DQ8NFY4 1073 aa10.45□□□□□ -0.74
SMAD3-208ENST00000558827 OR8B3Q8NGG8 313 aa10.45□□□□□ -0.74
SMAD3-208ENST00000558827 OR8S1Q8NH09 359 aa10.45□□□□□ -0.74
SMAD3-208ENST00000558827 OR5K1Q8NHB7 308 aa10.45□□□□□ -0.74
SMAD3-208ENST00000558827 OTOSQ8NHW6 89 aa10.45□□□□□ -0.74
SMAD3-208ENST00000558827 LRTOMTQ8WZ04 291 aa10.45□□□□□ -0.74
SMAD3-208ENST00000558827 PPP1R14AQ96A00 147 aa10.45□□□□□ -0.74
SMAD3-208ENST00000558827 SEH1LQ96EE3 360 aa10.45□□□□□ -0.74
SMAD3-208ENST00000558827 TECTBQ96PL2 329 aa10.45□□□□□ -0.74
SMAD3-208ENST00000558827 OR8B2Q96RD0 313 aa10.45□□□□□ -0.74
SMAD3-208ENST00000558827 MRI1Q9BV20 369 aa10.45□□□□□ -0.74
SMAD3-208ENST00000558827 OR10A2Q9H208 303 aa10.45□□□□□ -0.74
SMAD3-208ENST00000558827 SEMA6AQ9H2E6 1030 aa10.45□□□□□ -0.74
SMAD3-208ENST00000558827 TOR3AQ9H497 397 aa10.45□□□□□ -0.74
SMAD3-208ENST00000558827 SLC25A19Q9HC21 320 aa10.45□□□□□ -0.74
SMAD3-208ENST00000558827 ESM1Q9NQ30 184 aa10.45□□□□□ -0.74
SMAD3-208ENST00000558827 MRPL15Q9P015 296 aaKnown RBP10.45□□□□□ -0.74
SMAD3-208ENST00000558827 MIOXQ9UGB7 285 aa10.45□□□□□ -0.74
SMAD3-208ENST00000558827 RHBDD3Q9Y3P4 386 aa10.45□□□□□ -0.74
SMAD3-208ENST00000558827 FBN3Q75N90 2809 aa10.44□□□□□ -0.74
SMAD3-208ENST00000558827 hCG_38984A0A1B0GV85 526 aa10.44□□□□□ -0.74
SMAD3-208ENST00000558827 CCDC182A6NF36 153 aa10.44□□□□□ -0.74
SMAD3-208ENST00000558827 PRR32B1ATL7 298 aa10.44□□□□□ -0.74
SMAD3-208ENST00000558827 HAX1O00165 279 aa10.44□□□□□ -0.74
SMAD3-208ENST00000558827 LGALS8O00214 317 aa10.44□□□□□ -0.74
SMAD3-208ENST00000558827 ADAM20O43506 726 aa10.44□□□□□ -0.74
SMAD3-208ENST00000558827 GMDSO60547 372 aa10.44□□□□□ -0.74
SMAD3-208ENST00000558827 TFF1P04155 84 aa10.44□□□□□ -0.74
SMAD3-208ENST00000558827 IGHV4-38-2P0DP08 117 aa10.44□□□□□ -0.74
SMAD3-208ENST00000558827 SLC2A5P22732 501 aa10.44□□□□□ -0.74
SMAD3-208ENST00000558827 GATA3P23771 443 aa10.44□□□□□ -0.74
SMAD3-208ENST00000558827 GATA4P43694 442 aa10.44□□□□□ -0.74
SMAD3-208ENST00000558827 ACTG1P63261 375 aa10.44□□□□□ -0.74
SMAD3-208ENST00000558827 PTGES3Q15185 160 aaKnown RBP10.44□□□□□ -0.74
SMAD3-208ENST00000558827 ZNF181Q2M3W8 571 aa10.44□□□□□ -0.74
SMAD3-208ENST00000558827 WDR25Q64LD2 544 aaPredicted RBP10.44□□□□□ -0.74
SMAD3-208ENST00000558827 FAHD1Q6P587 224 aa10.44□□□□□ -0.74
SMAD3-208ENST00000558827 KRT77Q7Z794 578 aa10.44□□□□□ -0.74
SMAD3-208ENST00000558827 SIGLECL1Q8N7X8 197 aa10.44□□□□□ -0.74
SMAD3-208ENST00000558827 TCEANCQ8N8B7 351 aa10.44□□□□□ -0.74
SMAD3-208ENST00000558827 Q8TCH9 128 aa10.44□□□□□ -0.74
SMAD3-208ENST00000558827 PIGCQ92535 297 aa10.44□□□□□ -0.74
SMAD3-208ENST00000558827 TAF15Q92804 592 aaKnown RBP eCLIP10.44□□□□□ -0.74
SMAD3-208ENST00000558827 LYZL4Q96KX0 146 aa10.44□□□□□ -0.74
SMAD3-208ENST00000558827 IL4I1Q96RQ9 567 aa10.44□□□□□ -0.74
SMAD3-208ENST00000558827 TEAD3Q99594 435 aa10.44□□□□□ -0.74
SMAD3-208ENST00000558827 PAPOLGQ9BWT3 736 aaKnown RBP10.44□□□□□ -0.74
SMAD3-208ENST00000558827 SLC22A4Q9H015 551 aa10.44□□□□□ -0.74
SMAD3-208ENST00000558827 KRT84Q9NSB2 600 aa10.44□□□□□ -0.74
SMAD3-208ENST00000558827 CTSZQ9UBR2 303 aa10.44□□□□□ -0.74
SMAD3-208ENST00000558827 CLN8Q9UBY8 286 aa10.44□□□□□ -0.74
SMAD3-208ENST00000558827 LAMP5Q9UJQ1 280 aa10.44□□□□□ -0.74
SMAD3-208ENST00000558827 COPS3Q9UNS2 423 aa10.44□□□□□ -0.74
SMAD3-208ENST00000558827 LRCH1Q9Y2L9 728 aa10.44□□□□□ -0.74
SMAD3-208ENST00000558827 TENM1Q9UKZ4 2725 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.43□□□□□ -0.74
SMAD3-208ENST00000558827 A0A1B0GW55 424 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 ZNF850A8MQ14 1090 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 A8MXK9 166 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 C22orf46C9J442 243 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 G3V2T6 193 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 FSHBP01225 129 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 DUX4L2P0CJ85 424 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 DUX4L3P0CJ86 424 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 DUX4L4P0CJ87 422 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 DUX4L5P0CJ88 424 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 DUX4L6P0CJ89 424 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 DUX4L7P0CJ90 424 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 ALOX5APP20292 161 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 FPR2P25090 351 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 ACKR3P25106 362 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 POLR2IP36954 125 aaKnown RBP10.43□□□□□ -0.74
SMAD3-208ENST00000558827 PAX8Q06710 450 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 ATP6AP1Q15904 470 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 DUX4L9Q6RFH8 374 aaPredicted RBP10.43□□□□□ -0.74
SMAD3-208ENST00000558827 PLEKHG7Q6ZR37 379 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 KCTD8Q6ZWB6 473 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 C11orf53Q8IXP5 236 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 GCSAMQ8N6F7 178 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 CELF2-AS1Q8N7Q2 184 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 ZDHHC22Q8N966 263 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 OR8B12Q8NGG6 310 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 LRRC29Q8WV35 223 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 RAB40AQ8WXH6 277 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 SPSB4Q96A44 273 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 NUDT16L1Q9BRJ7 211 aaKnown RBP10.43□□□□□ -0.74
SMAD3-208ENST00000558827 TEX12Q9BXU0 123 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 DUX4Q9UBX2 424 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 NUP50Q9UKX7 468 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 LRP12Q9Y561 859 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 AP4S1Q9Y587 144 aa10.43□□□□□ -0.74
SMAD3-208ENST00000558827 PPIAL4CA0A0B4J2A2 164 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 IGHV2-70DA0A0C4DH43 119 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 MDFIC2A0A1B0GVS7 189 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 SAC3D1A6NKF1 404 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 PRODHO43272 600 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 APOL3O95236 402 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 APOC1P02654 83 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 FASP25445 335 aa10.42□□□□□ -0.74
SMAD3-208ENST00000558827 GNALP38405 381 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms