RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 TRAV38-1A0A0B4J264 116 aa7.67□□□□□ -1.18
HDAC6-232ENST00000489053 PPIAL4CA0A0B4J2A2 164 aa7.67□□□□□ -1.18
HDAC6-232ENST00000489053 C3orf80F5H4A9 247 aa7.67□□□□□ -1.18
HDAC6-232ENST00000489053 TRIM77I1YAP6 450 aa7.67□□□□□ -1.18
HDAC6-232ENST00000489053 FAM20BO75063 409 aa7.67□□□□□ -1.18
HDAC6-232ENST00000489053 ATP6V1E1P36543 226 aa7.67□□□□□ -1.18
HDAC6-232ENST00000489053 OPRL1P41146 370 aa7.67□□□□□ -1.18
HDAC6-232ENST00000489053 PSMA6P60900 246 aaKnown RBP7.67□□□□□ -1.18
HDAC6-232ENST00000489053 CDK5Q00535 292 aa7.67□□□□□ -1.18
HDAC6-232ENST00000489053 IL5RAQ01344 420 aa7.67□□□□□ -1.18
HDAC6-232ENST00000489053 LINC01590Q5TEZ4 76 aa7.67□□□□□ -1.18
HDAC6-232ENST00000489053 CD276Q5ZPR3 534 aa7.67□□□□□ -1.18
HDAC6-232ENST00000489053 LRRN1Q6UXK5 716 aa7.67□□□□□ -1.18
HDAC6-232ENST00000489053 DCDC5Q6ZRR9 648 aa7.67□□□□□ -1.18
HDAC6-232ENST00000489053 RHOUQ7L0Q8 258 aa7.67□□□□□ -1.18
HDAC6-232ENST00000489053 THAP5Q7Z6K1 395 aa7.67□□□□□ -1.18
HDAC6-232ENST00000489053 PHC2Q8IXK0 858 aa7.67□□□□□ -1.18
HDAC6-232ENST00000489053 TIGD4Q8IY51 512 aa7.67□□□□□ -1.18
HDAC6-232ENST00000489053 PARP8Q8N3A8 854 aa7.67□□□□□ -1.18
HDAC6-232ENST00000489053 ASB17Q8WXJ9 295 aa7.67□□□□□ -1.18
HDAC6-232ENST00000489053 DVL3Q92997 716 aaPredicted RBP7.67□□□□□ -1.18
HDAC6-232ENST00000489053 RTL8AQ9BWD3 113 aa7.67□□□□□ -1.18
HDAC6-232ENST00000489053 YIPF3Q9GZM5 350 aa7.67□□□□□ -1.18
HDAC6-232ENST00000489053 ABCB9Q9NP78 766 aa7.67□□□□□ -1.18
HDAC6-232ENST00000489053 G6PC2Q9NQR9 355 aa7.67□□□□□ -1.18
HDAC6-232ENST00000489053 ERVK-18Q9QC07 812 aa7.67□□□□□ -1.18
HDAC6-232ENST00000489053 ZNF391Q9UJN7 358 aa7.67□□□□□ -1.18
HDAC6-232ENST00000489053 SLC22A31A6NKX4 558 aa7.66□□□□□ -1.18
HDAC6-232ENST00000489053 ZNF670-ZNF695F2Z2N8 137 aa7.66□□□□□ -1.18
HDAC6-232ENST00000489053 LGALS8O00214 317 aa7.66□□□□□ -1.18
HDAC6-232ENST00000489053 PHYHO14832 338 aa7.66□□□□□ -1.18
HDAC6-232ENST00000489053 NDUFA2O43678 99 aa7.66□□□□□ -1.18
HDAC6-232ENST00000489053 GSK3AP49840 483 aa7.66□□□□□ -1.18
HDAC6-232ENST00000489053 RIDAP52758 137 aaKnown RBP7.66□□□□□ -1.18
HDAC6-232ENST00000489053 SRSF2Q01130 221 aaKnown RBP7.66□□□□□ -1.18
HDAC6-232ENST00000489053 ZNF154Q13106 437 aa7.66□□□□□ -1.18
HDAC6-232ENST00000489053 MAB21L1Q13394 359 aa7.66□□□□□ -1.18
HDAC6-232ENST00000489053 PTGES3Q15185 160 aaKnown RBP7.66□□□□□ -1.18
HDAC6-232ENST00000489053 ZNF404Q494X3 552 aa7.66□□□□□ -1.18
HDAC6-232ENST00000489053 SFRP4Q6FHJ7 346 aaPredicted RBP7.66□□□□□ -1.18
HDAC6-232ENST00000489053 FAHD1Q6P587 224 aa7.66□□□□□ -1.18
HDAC6-232ENST00000489053 GID4Q8IVV7 300 aa7.66□□□□□ -1.18
HDAC6-232ENST00000489053 TCEANCQ8N8B7 351 aa7.66□□□□□ -1.18
HDAC6-232ENST00000489053 BBS1Q8NFJ9 593 aa7.66□□□□□ -1.18
HDAC6-232ENST00000489053 Q8TCH9 128 aa7.66□□□□□ -1.18
HDAC6-232ENST00000489053 UTP4Q969X6 686 aaKnown RBP7.66□□□□□ -1.18
HDAC6-232ENST00000489053 SGK3Q96BR1 496 aa7.66□□□□□ -1.18
HDAC6-232ENST00000489053 SIGLEC11Q96RL6 698 aa7.66□□□□□ -1.18
HDAC6-232ENST00000489053 TMEM246Q9BRR3 403 aa7.66□□□□□ -1.18
HDAC6-232ENST00000489053 TMPRSS13Q9BYE2 586 aa7.66□□□□□ -1.18
HDAC6-232ENST00000489053 MS4A7Q9GZW8 240 aaPredicted RBP7.66□□□□□ -1.18
HDAC6-232ENST00000489053 RIBC2Q9H4K1 309 aa7.66□□□□□ -1.18
HDAC6-232ENST00000489053 TMEM165Q9HC07 324 aa7.66□□□□□ -1.18
HDAC6-232ENST00000489053 IMPAD1Q9NX62 359 aa7.66□□□□□ -1.18
HDAC6-232ENST00000489053 DNAJB11Q9UBS4 358 aa7.66□□□□□ -1.18
HDAC6-232ENST00000489053 FBN3Q75N90 2809 aa7.66□□□□□ -1.18
HDAC6-232ENST00000489053 TMEM269A0A1B0GVZ9 245 aa7.65□□□□□ -1.18
HDAC6-232ENST00000489053 OOEPA6NGQ2 149 aa7.65□□□□□ -1.18
HDAC6-232ENST00000489053 ADAM20O43506 726 aa7.65□□□□□ -1.18
HDAC6-232ENST00000489053 ENSAO43768 121 aaKnown RBP7.65□□□□□ -1.18
HDAC6-232ENST00000489053 ZNF254O75437 659 aa7.65□□□□□ -1.18
HDAC6-232ENST00000489053 PSKH1P11801 424 aa7.65□□□□□ -1.18
HDAC6-232ENST00000489053 ZFP36P26651 326 aaKnown RBP7.65□□□□□ -1.18
HDAC6-232ENST00000489053 CD80P33681 288 aa7.65□□□□□ -1.18
HDAC6-232ENST00000489053 MAP2K3P46734 347 aa7.65□□□□□ -1.18
HDAC6-232ENST00000489053 NPY4RP50391 375 aa7.65□□□□□ -1.18
HDAC6-232ENST00000489053 DAPP51397 102 aa7.65□□□□□ -1.18
HDAC6-232ENST00000489053 CDC42P60953 191 aa7.65□□□□□ -1.18
HDAC6-232ENST00000489053 SEC61A1P61619 476 aaKnown RBP7.65□□□□□ -1.18
HDAC6-232ENST00000489053 FAM3AP98173 230 aa7.65□□□□□ -1.18
HDAC6-232ENST00000489053 HNRNPA0Q13151 305 aaKnown RBP7.65□□□□□ -1.18
HDAC6-232ENST00000489053 MPPED2Q15777 294 aa7.65□□□□□ -1.18
HDAC6-232ENST00000489053 MICBQ29980 383 aa7.65□□□□□ -1.18
HDAC6-232ENST00000489053 KRTAP24-1Q3LI83 254 aa7.65□□□□□ -1.18
HDAC6-232ENST00000489053 BCL2L15Q5TBC7 163 aa7.65□□□□□ -1.18
HDAC6-232ENST00000489053 MEPCEQ7L2J0 689 aaKnown RBP7.65□□□□□ -1.18
HDAC6-232ENST00000489053 AMIGO2Q86SJ2 522 aa7.65□□□□□ -1.18
HDAC6-232ENST00000489053 ZDHHC23Q8IYP9 409 aa7.65□□□□□ -1.18
HDAC6-232ENST00000489053 C19orf18Q8NEA5 215 aa7.65□□□□□ -1.18
HDAC6-232ENST00000489053 C22orf15Q8WYQ4 148 aa7.65□□□□□ -1.18
HDAC6-232ENST00000489053 LRTOMTQ8WZ04 291 aa7.65□□□□□ -1.18
HDAC6-232ENST00000489053 PIGCQ92535 297 aa7.65□□□□□ -1.18
HDAC6-232ENST00000489053 SPSB4Q96A44 273 aa7.65□□□□□ -1.18
HDAC6-232ENST00000489053 CENPNQ96H22 339 aaPredicted RBP7.65□□□□□ -1.18
HDAC6-232ENST00000489053 IL4I1Q96RQ9 567 aa7.65□□□□□ -1.18
HDAC6-232ENST00000489053 AMELYQ99218 206 aa7.65□□□□□ -1.18
HDAC6-232ENST00000489053 TEAD3Q99594 435 aa7.65□□□□□ -1.18
HDAC6-232ENST00000489053 SLC6A7Q99884 636 aa7.65□□□□□ -1.18
HDAC6-232ENST00000489053 SEMA6AQ9H2E6 1030 aa7.65□□□□□ -1.18
HDAC6-232ENST00000489053 NTN4Q9HB63 628 aa7.65□□□□□ -1.18
HDAC6-232ENST00000489053 LRP12Q9Y561 859 aa7.65□□□□□ -1.18
HDAC6-232ENST00000489053 INSIG2Q9Y5U4 225 aa7.65□□□□□ -1.18
HDAC6-232ENST00000489053 MPC1Q9Y5U8 109 aa7.65□□□□□ -1.18
HDAC6-232ENST00000489053 IGHV2-70DA0A0C4DH43 119 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 hCG_38984A0A1B0GV85 526 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 A0A1B0GWJ7 208 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 NKX6-3A6NJ46 265 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 ACOD1A6NK06 481 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 SAC3D1A6NKF1 404 aa7.64□□□□□ -1.19
HDAC6-232ENST00000489053 ZNF850A8MQ14 1090 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms