RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 ZNF136P52737 540 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 CDKN2DP55273 166 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 TPM4P67936 248 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 FBXL19-AS1Q494R0 122 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 C1orf185Q5T7R7 199 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 LIPNQ5VXI9 398 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 OR5M10Q6IEU7 315 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 ADNP2Q6IQ32 1131 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 DGAT2L6Q6ZPD8 337 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 PEX26Q7Z412 305 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 CLEC4FQ8N1N0 589 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 GPR137CQ8N3F9 429 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 CADM2Q8N3J6 435 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 TMEM156Q8N614 296 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 NT5CQ8TCD5 201 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 MCOLN3Q8TDD5 553 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 EEF1AKMT1Q8WVE0 214 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 NEIL2Q969S2 332 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 ANKRD9Q96BM1 317 aaPredicted RBP4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 LRRC45Q96CN5 670 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 SNF8Q96H20 258 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 COQ2Q96H96 371 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 MYCBPQ99417 103 aaPredicted RBP4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 MCHR1Q99705 422 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 PYGO2Q9BRQ0 406 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 TMEM43Q9BTV4 400 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 PAXXQ9BUH6 204 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 IL22Q9GZX6 179 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 RHBGQ9H310 441 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 RPS10P5Q9NQ39 176 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 YARS2Q9Y2Z4 477 aaKnown RBP4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 AK6Q9Y3D8 172 aaKnown RBP4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 FLVCR1Q9Y5Y0 555 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 HIVEP2P31629 2446 aa4.15□□□□□ -1.75
RNU4-39P-201ENST00000362455 SONP18583 2426 aaKnown RBP4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 TRAV26-1A0A087WT03 109 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 IGKV3D-20A0A0C4DH25 116 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 DHRS7CA6NNS2 312 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 ZNF705EA8MWA4 302 aaPredicted RBP4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 UGT2B17O75795 530 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 ZNF189O75820 626 aaPredicted RBP4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 ETHE1O95571 254 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 OPN1MWP04001 364 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 SERPIND1P05546 499 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 GIG44P09565 113 aaPredicted RBP4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 SLC35G6P0C7Q6 338 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 OPN1MW2P0DN77 364 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 OPN1MW3P0DN78 364 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 RNH1P13489 461 aaKnown RBP4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 SLC1A2P43004 574 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 MAGEA3P43357 314 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 MAGEA6P43360 314 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 CCR8P51685 355 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 REEP5Q00765 189 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 PLGLB1Q02325 96 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 CAPRIN1Q14444 709 aaKnown RBP4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 SPA17Q15506 151 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 C18orf21Q32NC0 220 aaPredicted RBP4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 ZNF791Q3KP31 576 aaPredicted RBP4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 SLC25A30Q5SVS4 291 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 OLFML2AQ68BL7 652 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 ZNF470Q6ECI4 717 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 BAIAP2L2Q6UXY1 529 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 SLC13A5Q86YT5 568 aaPredicted RBP4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 MTURNQ8N3F0 131 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 OTUD6BQ8N6M0 293 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 DOK4Q8TEW6 326 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 RNASE6Q93091 150 aaKnown RBP4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 MS4A14Q96JA4 679 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 ZBTB18Q99592 522 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 GON7Q9BXV9 100 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 PCBD2Q9H0N5 130 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 PARVBQ9HBI1 364 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 NANSQ9NR45 359 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 B3GNT2Q9NY97 397 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 BFARQ9NZS9 450 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 OR1A1Q9P1Q5 309 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 Q9UF83 564 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 TIMM10BQ9Y5J6 103 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 WIF1Q9Y5W5 379 aa4.14□□□□□ -1.75
RNU4-39P-201ENST00000362455 NUP210LQ5VU65 1888 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 CPAMD8Q8IZJ3 1885 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 HCFC1P51610 2035 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 IGLV8-61A0A075B6I0 122 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 TRGV5A0A0B4J1U4 118 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 TUBAL3A6NHL2 446 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 MIF4GDA9UHW6 222 aaKnown RBP4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 E5RI56 91 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 SULT2B1O00204 365 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 PRKYO43930 277 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 HCN1O60741 890 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 SCGNO76038 276 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 EPPINO95925 133 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 IGKV3-11P04433 115 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 TPM3P06753 285 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 SERPINA6P08185 405 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 IMPDH1P20839 514 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 VDAC1P21796 283 aa4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 LOXP28300 417 aaPredicted RBP4.13□□□□□ -1.75
RNU4-39P-201ENST00000362455 GCKP35557 465 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms