RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 HLA-DPB1P04440 258 aa7.09□□□□□ -1.27
SMAD4-215ENST00000592911 DBHP09172 617 aa7.09□□□□□ -1.27
SMAD4-215ENST00000592911 ACSM4P0C7M7 580 aa7.09□□□□□ -1.27
SMAD4-215ENST00000592911 IFI30P13284 250 aa7.09□□□□□ -1.27
SMAD4-215ENST00000592911 NAA10P41227 235 aaPredicted RBP7.09□□□□□ -1.27
SMAD4-215ENST00000592911 TPTEP56180 551 aa7.09□□□□□ -1.27
SMAD4-215ENST00000592911 CAV3P56539 151 aa7.09□□□□□ -1.27
SMAD4-215ENST00000592911 SPIBQ01892 262 aa7.09□□□□□ -1.27
SMAD4-215ENST00000592911 TAGLNQ01995 201 aaKnown RBP7.09□□□□□ -1.27
SMAD4-215ENST00000592911 CD69Q07108 199 aa7.09□□□□□ -1.27
SMAD4-215ENST00000592911 DBPQ10586 325 aaPredicted RBP7.09□□□□□ -1.27
SMAD4-215ENST00000592911 FHL1Q13642 323 aa7.09□□□□□ -1.27
SMAD4-215ENST00000592911 MPP2Q14168 576 aa7.09□□□□□ -1.27
SMAD4-215ENST00000592911 DOC2BQ14184 412 aa7.09□□□□□ -1.27
SMAD4-215ENST00000592911 SLC36A3Q495N2 470 aa7.09□□□□□ -1.27
SMAD4-215ENST00000592911 WDR93Q6P2C0 686 aa7.09□□□□□ -1.27
SMAD4-215ENST00000592911 MRPL21Q7Z2W9 205 aaKnown RBP7.09□□□□□ -1.27
SMAD4-215ENST00000592911 GCSAMQ8N6F7 178 aa7.09□□□□□ -1.27
SMAD4-215ENST00000592911 CYB561A3Q8NBI2 242 aa7.09□□□□□ -1.27
SMAD4-215ENST00000592911 OR51G2Q8NGK0 314 aa7.09□□□□□ -1.27
SMAD4-215ENST00000592911 ST8SIA4Q92187 359 aa7.09□□□□□ -1.27
SMAD4-215ENST00000592911 SLC7A6Q92536 515 aa7.09□□□□□ -1.27
SMAD4-215ENST00000592911 ZNF570Q96NI8 536 aa7.09□□□□□ -1.27
SMAD4-215ENST00000592911 SSX3Q99909 188 aa7.09□□□□□ -1.27
SMAD4-215ENST00000592911 ATF6BQ99941 703 aa7.09□□□□□ -1.27
SMAD4-215ENST00000592911 PAIP2Q9BPZ3 127 aaKnown RBP7.09□□□□□ -1.27
SMAD4-215ENST00000592911 ABCB9Q9NP78 766 aa7.09□□□□□ -1.27
SMAD4-215ENST00000592911 UFSP2Q9NUQ7 469 aa7.09□□□□□ -1.27
SMAD4-215ENST00000592911 ONECUT1Q9UBC0 465 aa7.09□□□□□ -1.27
SMAD4-215ENST00000592911 PITPNC1Q9UKF7 332 aa7.09□□□□□ -1.27
SMAD4-215ENST00000592911 FOXJ3Q9UPW0 622 aa7.09□□□□□ -1.27
SMAD4-215ENST00000592911 SH3GLB1Q9Y371 365 aa7.09□□□□□ -1.27
SMAD4-215ENST00000592911 NDUFAF1Q9Y375 327 aa7.09□□□□□ -1.27
SMAD4-215ENST00000592911 LRP12Q9Y561 859 aa7.09□□□□□ -1.27
SMAD4-215ENST00000592911 TRBV23-1A0A0A0MS06 115 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 EFCAB9A8MZ26 197 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 K7EIL1 84 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 ANGPT2O15123 496 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 SLC16A7O60669 478 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 GLCEO94923 617 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 ZFPL1O95159 310 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 PPP1R3DO95685 299 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 CLIC3O95833 236 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 TXNDC12O95881 172 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 GYPAP02724 150 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 RPL4P36578 427 aaKnown RBP7.08□□□□□ -1.28
SMAD4-215ENST00000592911 TGM4P49221 684 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 CRYBA2P53672 197 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 PIN1Q13526 163 aaPredicted RBP7.08□□□□□ -1.28
SMAD4-215ENST00000592911 KRR1Q13601 381 aaKnown RBP7.08□□□□□ -1.28
SMAD4-215ENST00000592911 TRAM2Q15035 370 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 ZBED5Q49AG3 693 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 MESTQ5EB52 335 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 RABL3Q5HYI8 236 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 PRAMEF6Q5VXH4 476 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 SFRP4Q6FHJ7 346 aaPredicted RBP7.08□□□□□ -1.28
SMAD4-215ENST00000592911 Q8N7P7 452 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 OR8J3Q8NGG0 315 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 OR4C15Q8NGM1 316 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 OR10Z1Q8NGY1 313 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 PPP1R35Q8TAP8 253 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 DPF1Q92782 380 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 ITFG2Q969R8 447 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 SPTSSAQ969W0 71 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 MED30Q96HR3 178 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 WNT10AQ9GZT5 417 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 MMP28Q9H239 520 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 NRIP3Q9NQ35 241 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 SERTAD4Q9NUC0 356 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 C1orf123Q9NWV4 160 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 NKIRAS1Q9NYS0 192 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 LHFPL6Q9Y693 200 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 CAPN7Q9Y6W3 813 aa7.08□□□□□ -1.28
SMAD4-215ENST00000592911 TRAV27A0A087WT01 109 aa7.07□□□□□ -1.28
SMAD4-215ENST00000592911 A0A1W2PPH5 198 aa7.07□□□□□ -1.28
SMAD4-215ENST00000592911 TMEM120BA0PK00 339 aa7.07□□□□□ -1.28
SMAD4-215ENST00000592911 NKX6-3A6NJ46 265 aa7.07□□□□□ -1.28
SMAD4-215ENST00000592911 H3BUI4 141 aa7.07□□□□□ -1.28
SMAD4-215ENST00000592911 BHLHE40O14503 412 aa7.07□□□□□ -1.28
SMAD4-215ENST00000592911 IMPA2O14732 288 aa7.07□□□□□ -1.28
SMAD4-215ENST00000592911 FCN3O75636 299 aa7.07□□□□□ -1.28
SMAD4-215ENST00000592911 NDUFB2O95178 105 aa7.07□□□□□ -1.28
SMAD4-215ENST00000592911 VSIG10L2P0DP72 767 aa7.07□□□□□ -1.28
SMAD4-215ENST00000592911 ZNF26P17031 533 aaPredicted RBP7.07□□□□□ -1.28
SMAD4-215ENST00000592911 CA6P23280 308 aa7.07□□□□□ -1.28
SMAD4-215ENST00000592911 OTX1P32242 354 aaPredicted RBP7.07□□□□□ -1.28
SMAD4-215ENST00000592911 RBMXP38159 391 aaKnown RBP7.07□□□□□ -1.28
SMAD4-215ENST00000592911 GSK3BP49841 420 aa7.07□□□□□ -1.28
SMAD4-215ENST00000592911 GZMMP51124 257 aa7.07□□□□□ -1.28
SMAD4-215ENST00000592911 RPS6KA3P51812 740 aa7.07□□□□□ -1.28
SMAD4-215ENST00000592911 MTPNP58546 118 aa7.07□□□□□ -1.28
SMAD4-215ENST00000592911 VSNL1P62760 191 aa7.07□□□□□ -1.28
SMAD4-215ENST00000592911 TRAP1Q12931 704 aaKnown RBP7.07□□□□□ -1.28
SMAD4-215ENST00000592911 RSPO1Q2MKA7 263 aaPredicted RBP7.07□□□□□ -1.28
SMAD4-215ENST00000592911 AGKQ53H12 422 aa7.07□□□□□ -1.28
SMAD4-215ENST00000592911 COQ5Q5HYK3 327 aa7.07□□□□□ -1.28
SMAD4-215ENST00000592911 C11orf87Q6NUJ2 197 aa7.07□□□□□ -1.28
SMAD4-215ENST00000592911 DRAM2Q6UX65 266 aa7.07□□□□□ -1.28
SMAD4-215ENST00000592911 DPY19L2P2Q6ZN68 376 aa7.07□□□□□ -1.28
SMAD4-215ENST00000592911 TSEN54Q7Z6J9 526 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms