RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 LRP12Q9Y561 859 aa13.4□□□□□ -0.26
SF3A3-203ENST00000461869 CADP27708 2225 aa13.39□□□□□ -0.27
SF3A3-203ENST00000461869 TRBV2A0A0J9YWF9 115 aa13.39□□□□□ -0.27
SF3A3-203ENST00000461869 PNMA8CA0A1B0GUJ8 204 aa13.39□□□□□ -0.27
SF3A3-203ENST00000461869 PSMD9O00233 223 aa13.39□□□□□ -0.27
SF3A3-203ENST00000461869 SERPINA3P01011 423 aa13.39□□□□□ -0.27
SF3A3-203ENST00000461869 APOC1P02654 83 aa13.39□□□□□ -0.27
SF3A3-203ENST00000461869 B4GALT1P15291 398 aa13.39□□□□□ -0.27
SF3A3-203ENST00000461869 HSD11B1P28845 292 aa13.39□□□□□ -0.27
SF3A3-203ENST00000461869 GDI2P50395 445 aaKnown RBP13.39□□□□□ -0.27
SF3A3-203ENST00000461869 EFNA4P52798 201 aa13.39□□□□□ -0.27
SF3A3-203ENST00000461869 TAF13Q15543 124 aa13.39□□□□□ -0.27
SF3A3-203ENST00000461869 SLC36A2Q495M3 483 aa13.39□□□□□ -0.27
SF3A3-203ENST00000461869 OTPQ5XKR4 325 aa13.39□□□□□ -0.27
SF3A3-203ENST00000461869 OR7E24Q6IFN5 339 aa13.39□□□□□ -0.27
SF3A3-203ENST00000461869 FDX2Q6P4F2 183 aa13.39□□□□□ -0.27
SF3A3-203ENST00000461869 CORO6Q6QEF8 472 aa13.39□□□□□ -0.27
SF3A3-203ENST00000461869 CFAP77Q6ZQR2 320 aa13.39□□□□□ -0.27
SF3A3-203ENST00000461869 SLC16A14Q7RTX9 510 aa13.39□□□□□ -0.27
SF3A3-203ENST00000461869 ALDH16A1Q8IZ83 802 aa13.39□□□□□ -0.27
SF3A3-203ENST00000461869 LRRC18Q8N456 261 aa13.39□□□□□ -0.27
SF3A3-203ENST00000461869 ZFP41Q8N8Y5 198 aa13.39□□□□□ -0.27
SF3A3-203ENST00000461869 THRSPQ92748 146 aa13.39□□□□□ -0.27
SF3A3-203ENST00000461869 ZNF837Q96EG3 531 aaPredicted RBP13.39□□□□□ -0.27
SF3A3-203ENST00000461869 MAP6Q96JE9 813 aa13.39□□□□□ -0.27
SF3A3-203ENST00000461869 C1QTNF6Q9BXI9 259 aa13.39□□□□□ -0.27
SF3A3-203ENST00000461869 NAA50Q9GZZ1 169 aaKnown RBP13.39□□□□□ -0.27
SF3A3-203ENST00000461869 COMMD4Q9H0A8 199 aa13.39□□□□□ -0.27
SF3A3-203ENST00000461869 HDHD2Q9H0R4 259 aa13.39□□□□□ -0.27
SF3A3-203ENST00000461869 CENPMQ9NSP4 180 aa13.39□□□□□ -0.27
SF3A3-203ENST00000461869 DDX28Q9NUL7 540 aaKnown RBP13.39□□□□□ -0.27
SF3A3-203ENST00000461869 ATP23Q9Y6H3 246 aa13.39□□□□□ -0.27
SF3A3-203ENST00000461869 ARPC4-TTLL3A0A0A6YYG9 625 aa13.38□□□□□ -0.27
SF3A3-203ENST00000461869 TMEM212A6NML5 194 aa13.38□□□□□ -0.27
SF3A3-203ENST00000461869 E9PI62 339 aa13.38□□□□□ -0.27
SF3A3-203ENST00000461869 MAGEB4O15481 346 aaPredicted RBP13.38□□□□□ -0.27
SF3A3-203ENST00000461869 RGS9O75916 674 aaPredicted RBP13.38□□□□□ -0.27
SF3A3-203ENST00000461869 LY6HO94772 140 aa13.38□□□□□ -0.27
SF3A3-203ENST00000461869 RPP14O95059 124 aaKnown RBP13.38□□□□□ -0.27
SF3A3-203ENST00000461869 GZMKP49863 264 aa13.38□□□□□ -0.27
SF3A3-203ENST00000461869 CCR9P51686 369 aa13.38□□□□□ -0.27
SF3A3-203ENST00000461869 HIST1H3AP68431 136 aa13.38□□□□□ -0.27
SF3A3-203ENST00000461869 ARF1P84077 181 aaKnown RBP13.38□□□□□ -0.27
SF3A3-203ENST00000461869 SLC3A1Q07837 685 aa13.38□□□□□ -0.27
SF3A3-203ENST00000461869 ECH1Q13011 328 aa13.38□□□□□ -0.27
SF3A3-203ENST00000461869 ALKBH1Q13686 389 aaKnown RBP13.38□□□□□ -0.27
SF3A3-203ENST00000461869 CTF1Q16619 201 aa13.38□□□□□ -0.27
SF3A3-203ENST00000461869 CNPY1Q3B7I2 92 aa13.38□□□□□ -0.27
SF3A3-203ENST00000461869 HIST2H3PS2Q5TEC6 136 aa13.38□□□□□ -0.27
SF3A3-203ENST00000461869 FAM166AQ6J272 317 aa13.38□□□□□ -0.27
SF3A3-203ENST00000461869 ANKRD16Q6P6B7 361 aa13.38□□□□□ -0.27
SF3A3-203ENST00000461869 CD200R1LQ6Q8B3 271 aa13.38□□□□□ -0.27
SF3A3-203ENST00000461869 IL17RELQ6ZVW7 336 aa13.38□□□□□ -0.27
SF3A3-203ENST00000461869 HIST2H3AQ71DI3 136 aa13.38□□□□□ -0.27
SF3A3-203ENST00000461869 CHCHD6Q9BRQ6 235 aa13.38□□□□□ -0.27
SF3A3-203ENST00000461869 OR51E2Q9H255 320 aa13.38□□□□□ -0.27
SF3A3-203ENST00000461869 CHODLQ9H9P2 273 aa13.38□□□□□ -0.27
SF3A3-203ENST00000461869 EXOSC4Q9NPD3 245 aaKnown RBP13.38□□□□□ -0.27
SF3A3-203ENST00000461869 ATPIF1Q9UII2 106 aa13.38□□□□□ -0.27
SF3A3-203ENST00000461869 KCNS2Q9ULS6 477 aa13.38□□□□□ -0.27
SF3A3-203ENST00000461869 GSTK1Q9Y2Q3 226 aa13.38□□□□□ -0.27
SF3A3-203ENST00000461869 SF3B6Q9Y3B4 125 aaKnown RBP13.38□□□□□ -0.27
SF3A3-203ENST00000461869 GRIP1Q9Y3R0 1128 aa13.38□□□□□ -0.27
SF3A3-203ENST00000461869 TIMM10BQ9Y5J6 103 aa13.38□□□□□ -0.27
SF3A3-203ENST00000461869 R4GMQ9 66 aa13.38□□□□□ -0.27
SF3A3-203ENST00000461869 PMF1-BGLAPU3KQ54 211 aa13.38□□□□□ -0.27
SF3A3-203ENST00000461869 LOC100506127A0A0U1RQW1 187 aa13.37□□□□□ -0.27
SF3A3-203ENST00000461869 TRDV1A0A1B0GX56 115 aa13.37□□□□□ -0.27
SF3A3-203ENST00000461869 RER1O15258 196 aa13.37□□□□□ -0.27
SF3A3-203ENST00000461869 PSMB10P40306 273 aa13.37□□□□□ -0.27
SF3A3-203ENST00000461869 PSMA6P60900 246 aaKnown RBP13.37□□□□□ -0.27
SF3A3-203ENST00000461869 RPS25P62851 125 aaKnown RBP13.37□□□□□ -0.27
SF3A3-203ENST00000461869 GABRA6Q16445 453 aa13.37□□□□□ -0.27
SF3A3-203ENST00000461869 ELFN2Q5R3F8 820 aa13.37□□□□□ -0.27
SF3A3-203ENST00000461869 FAM120AOSQ5T036 256 aa13.37□□□□□ -0.27
SF3A3-203ENST00000461869 USP43Q70EL4 1123 aa13.37□□□□□ -0.27
SF3A3-203ENST00000461869 SPATC1Q76KD6 591 aa13.37□□□□□ -0.27
SF3A3-203ENST00000461869 CCDC36Q8IYA8 594 aa13.37□□□□□ -0.27
SF3A3-203ENST00000461869 C1orf162Q8NEQ5 155 aaPredicted RBP13.37□□□□□ -0.27
SF3A3-203ENST00000461869 OR2G2Q8NGZ5 317 aa13.37□□□□□ -0.27
SF3A3-203ENST00000461869 PGLYRP3Q96LB9 341 aa13.37□□□□□ -0.27
SF3A3-203ENST00000461869 C4orf45Q96LM5 186 aa13.37□□□□□ -0.27
SF3A3-203ENST00000461869 ATF6BQ99941 703 aa13.37□□□□□ -0.27
SF3A3-203ENST00000461869 TMED9Q9BVK6 235 aa13.37□□□□□ -0.27
SF3A3-203ENST00000461869 PLEK2Q9NYT0 353 aa13.37□□□□□ -0.27
SF3A3-203ENST00000461869 PTTG2Q9NZH5 202 aa13.37□□□□□ -0.27
SF3A3-203ENST00000461869 YLPM1P49750 1951 aaKnown RBP13.36□□□□□ -0.27
SF3A3-203ENST00000461869 LOC100289279A0A1B0GTE1 492 aa13.36□□□□□ -0.27
SF3A3-203ENST00000461869 LOC110117498-PIK3R3F6TDL0 507 aa13.36□□□□□ -0.27
SF3A3-203ENST00000461869 SGCEO43556 437 aa13.36□□□□□ -0.27
SF3A3-203ENST00000461869 UBL3O95164 117 aa13.36□□□□□ -0.27
SF3A3-203ENST00000461869 FGF9P31371 208 aaPredicted RBP13.36□□□□□ -0.27
SF3A3-203ENST00000461869 APOBEC3AP31941 199 aaPredicted RBP13.36□□□□□ -0.27
SF3A3-203ENST00000461869 CRYBB2P43320 205 aa13.36□□□□□ -0.27
SF3A3-203ENST00000461869 MMP16P51512 607 aa13.36□□□□□ -0.27
SF3A3-203ENST00000461869 YIF1BQ5BJH7 314 aa13.36□□□□□ -0.27
SF3A3-203ENST00000461869 TMEM53Q6P2H8 277 aa13.36□□□□□ -0.27
SF3A3-203ENST00000461869 OR10S1Q8NGN2 331 aa13.36□□□□□ -0.27
SF3A3-203ENST00000461869 OR1K1Q8NGR3 316 aa13.36□□□□□ -0.27
SF3A3-203ENST00000461869 OR5AK2Q8NH90 309 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms