RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 UNC119Q13432 240 aa14.67□□□□□ -0.06
SAMM50-201ENST00000350028 RSPO1Q2MKA7 263 aaPredicted RBP14.67□□□□□ -0.06
SAMM50-201ENST00000350028 MOGAT2Q3SYC2 334 aa14.67□□□□□ -0.06
SAMM50-201ENST00000350028 ZNF260Q3ZCT1 412 aa14.67□□□□□ -0.06
SAMM50-201ENST00000350028 AWAT2Q6E213 333 aa14.67□□□□□ -0.06
SAMM50-201ENST00000350028 ACBD4Q8NC06 268 aa14.67□□□□□ -0.06
SAMM50-201ENST00000350028 AQP3Q92482 292 aa14.67□□□□□ -0.06
SAMM50-201ENST00000350028 SLC39A7Q92504 469 aa14.67□□□□□ -0.06
SAMM50-201ENST00000350028 FBXO17Q96EF6 278 aa14.67□□□□□ -0.06
SAMM50-201ENST00000350028 FER1L6-AS2Q96M78 137 aa14.67□□□□□ -0.06
SAMM50-201ENST00000350028 SIGLEC12Q96PQ1 595 aa14.67□□□□□ -0.06
SAMM50-201ENST00000350028 GINS4Q9BRT9 223 aa14.67□□□□□ -0.06
SAMM50-201ENST00000350028 NPDC1Q9NQX5 325 aaPredicted RBP14.67□□□□□ -0.06
SAMM50-201ENST00000350028 PLEK2Q9NYT0 353 aa14.67□□□□□ -0.06
SAMM50-201ENST00000350028 NPTNQ9Y639 398 aa14.67□□□□□ -0.06
SAMM50-201ENST00000350028 V9GYS6 101 aa14.67□□□□□ -0.06
SAMM50-201ENST00000350028 NCOA6Q14686 2063 aaPredicted RBP14.67□□□□□ -0.06
SAMM50-201ENST00000350028 CDK2AP1O14519 115 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 CPN1P15169 458 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 SLC6A9P48067 706 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 ECH1Q13011 328 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 RAB35Q15286 201 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 OR1C1Q15619 314 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 FAM189A2Q15884 450 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 GFOD2Q3B7J2 385 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 Q5BKY6 102 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 RIPPLY2Q5TAB7 128 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 Q6ZTK2 550 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 NAA40Q86UY6 237 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 NKD1Q969G9 470 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 C10orf35Q96D05 121 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 ZNF837Q96EG3 531 aaPredicted RBP14.66□□□□□ -0.06
SAMM50-201ENST00000350028 MS4A3Q96HJ5 214 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 LYZL4Q96KX0 146 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 PRRX2Q99811 253 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 TMEM38BQ9NVV0 291 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 MRPS28Q9Y2Q9 187 aaKnown RBP14.66□□□□□ -0.06
SAMM50-201ENST00000350028 PYCARD-AS1I3L0S3 204 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 M0R135 149 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 CREBL2O60519 120 aaPredicted RBP14.66□□□□□ -0.06
SAMM50-201ENST00000350028 ALX3O95076 343 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 RAB3DO95716 219 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 CHRM2P08172 466 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 MELTFP08582 738 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 HCKP08631 526 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 UBBP0CG47 229 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 PRF1P14222 555 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 SDHBP21912 280 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 NTF4P34130 210 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 SCRN3Q0VDG4 424 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 TRIP6Q15654 476 aaKnown RBP14.66□□□□□ -0.06
SAMM50-201ENST00000350028 ZNF626Q68DY1 528 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 SEZ6L2Q6UXD5 910 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 SLC36A1Q7Z2H8 476 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 SULF2Q8IWU5 870 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 ZNF101Q8IZC7 436 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 SPICQ8N5J4 248 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 TMEM45BQ96B21 275 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 ZNF799Q96GE5 643 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 SEC22CQ9BRL7 303 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 ZNF436Q9C0F3 470 aaPredicted RBP14.66□□□□□ -0.06
SAMM50-201ENST00000350028 ZNF703Q9H7S9 590 aaPredicted RBP14.66□□□□□ -0.06
SAMM50-201ENST00000350028 CRLF2Q9HC73 371 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 UPB1Q9UBR1 384 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 IL17BQ9UHF5 180 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 SCP2D1Q9UJQ7 156 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 WDFY3Q8IZQ1 3526 aa14.66□□□□□ -0.06
SAMM50-201ENST00000350028 E9PLN8 166 aa14.65□□□□□ -0.06
SAMM50-201ENST00000350028 DLL1O00548 723 aa14.65□□□□□ -0.06
SAMM50-201ENST00000350028 SGCEO43556 437 aa14.65□□□□□ -0.06
SAMM50-201ENST00000350028 MTRF1O75570 445 aaKnown RBP14.65□□□□□ -0.06
SAMM50-201ENST00000350028 DHRS3O75911 302 aa14.65□□□□□ -0.06
SAMM50-201ENST00000350028 CYB5AP00167 134 aa14.65□□□□□ -0.06
SAMM50-201ENST00000350028 CD74P04233 296 aa14.65□□□□□ -0.06
SAMM50-201ENST00000350028 ANXA7P20073 488 aaKnown RBP14.65□□□□□ -0.06
SAMM50-201ENST00000350028 ANOS1P23352 680 aa14.65□□□□□ -0.06
SAMM50-201ENST00000350028 CDNFQ49AH0 187 aa14.65□□□□□ -0.06
SAMM50-201ENST00000350028 LAMTOR1Q6IAA8 161 aa14.65□□□□□ -0.06
SAMM50-201ENST00000350028 GLIPR1L1Q6UWM5 242 aa14.65□□□□□ -0.06
SAMM50-201ENST00000350028 DRAM2Q6UX65 266 aa14.65□□□□□ -0.06
SAMM50-201ENST00000350028 GLRX5Q86SX6 157 aa14.65□□□□□ -0.06
SAMM50-201ENST00000350028 MEIOBQ8N635 442 aa14.65□□□□□ -0.06
SAMM50-201ENST00000350028 CHST4Q8NCG5 386 aa14.65□□□□□ -0.06
SAMM50-201ENST00000350028 OR4D10Q8NGI6 311 aa14.65□□□□□ -0.06
SAMM50-201ENST00000350028 OR52H1Q8NGJ2 320 aa14.65□□□□□ -0.06
SAMM50-201ENST00000350028 OR51S1Q8NGJ8 323 aa14.65□□□□□ -0.06
SAMM50-201ENST00000350028 OR8S1Q8NH09 359 aa14.65□□□□□ -0.06
SAMM50-201ENST00000350028 KCNG3Q8TAE7 436 aa14.65□□□□□ -0.06
SAMM50-201ENST00000350028 ZNF431Q8TF32 576 aaPredicted RBP14.65□□□□□ -0.06
SAMM50-201ENST00000350028 SSC4DQ8WTU2 575 aa14.65□□□□□ -0.06
SAMM50-201ENST00000350028 PP6455Q8WZ26 134 aa14.65□□□□□ -0.06
SAMM50-201ENST00000350028 OR10A2Q9H208 303 aa14.65□□□□□ -0.06
SAMM50-201ENST00000350028 DLL4Q9NR61 685 aa14.65□□□□□ -0.06
SAMM50-201ENST00000350028 CRYGSP22914 178 aa14.64□□□□□ -0.07
SAMM50-201ENST00000350028 HOXD11P31277 338 aaPredicted RBP14.64□□□□□ -0.07
SAMM50-201ENST00000350028 ZP1P60852 638 aa14.64□□□□□ -0.07
SAMM50-201ENST00000350028 TMEM53Q6P2H8 277 aa14.64□□□□□ -0.07
SAMM50-201ENST00000350028 ZNF584Q8IVC4 421 aa14.64□□□□□ -0.07
SAMM50-201ENST00000350028 OR10R2Q8NGX6 335 aa14.64□□□□□ -0.07
SAMM50-201ENST00000350028 DVL3Q92997 716 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms