RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 RAB38P57729 211 aa12.03□□□□□ -0.48
RPUSD4-201ENST00000298317 RAB1AP62820 205 aa12.03□□□□□ -0.48
RPUSD4-201ENST00000298317 BTG2P78543 158 aa12.03□□□□□ -0.48
RPUSD4-201ENST00000298317 SPEM2Q0P670 501 aa12.03□□□□□ -0.48
RPUSD4-201ENST00000298317 OR2A2Q6IF42 318 aa12.03□□□□□ -0.48
RPUSD4-201ENST00000298317 HIST2H3AQ71DI3 136 aa12.03□□□□□ -0.48
RPUSD4-201ENST00000298317 GATSQ8NAP1 163 aa12.03□□□□□ -0.48
RPUSD4-201ENST00000298317 OR52N5Q8NH56 324 aa12.03□□□□□ -0.48
RPUSD4-201ENST00000298317 RERGQ96A58 199 aaPredicted RBP12.03□□□□□ -0.48
RPUSD4-201ENST00000298317 ZNF524Q96C55 264 aa12.03□□□□□ -0.48
RPUSD4-201ENST00000298317 VWCEQ96DN2 955 aa12.03□□□□□ -0.48
RPUSD4-201ENST00000298317 RTBDNQ9BSG5 229 aaPredicted RBP12.03□□□□□ -0.48
RPUSD4-201ENST00000298317 METTL8Q9H825 291 aaKnown RBP12.03□□□□□ -0.48
RPUSD4-201ENST00000298317 G6PC2Q9NQR9 355 aa12.03□□□□□ -0.48
RPUSD4-201ENST00000298317 FBXL17Q9UF56 701 aa12.03□□□□□ -0.48
RPUSD4-201ENST00000298317 SERGEFQ9UGK8 458 aa12.03□□□□□ -0.48
RPUSD4-201ENST00000298317 OTOL1A6NHN0 477 aaPredicted RBP12.02□□□□□ -0.48
RPUSD4-201ENST00000298317 UMAD1C9J7I0 102 aa12.02□□□□□ -0.48
RPUSD4-201ENST00000298317 XKRYO14609 159 aa12.02□□□□□ -0.48
RPUSD4-201ENST00000298317 HCKP08631 526 aa12.02□□□□□ -0.48
RPUSD4-201ENST00000298317 ZNF708P17019 499 aa12.02□□□□□ -0.48
RPUSD4-201ENST00000298317 DDTP30046 118 aa12.02□□□□□ -0.48
RPUSD4-201ENST00000298317 DEFB103AP81534 67 aa12.02□□□□□ -0.48
RPUSD4-201ENST00000298317 CD226Q15762 336 aa12.02□□□□□ -0.48
RPUSD4-201ENST00000298317 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.02□□□□□ -0.48
RPUSD4-201ENST00000298317 CNKSR3Q6P9H4 555 aa12.02□□□□□ -0.48
RPUSD4-201ENST00000298317 OR2I1PQ8NGU4 316 aa12.02□□□□□ -0.48
RPUSD4-201ENST00000298317 TAAR8Q969N4 342 aa12.02□□□□□ -0.48
RPUSD4-201ENST00000298317 AMDHD2Q9Y303 409 aa12.02□□□□□ -0.48
RPUSD4-201ENST00000298317 EMC9Q9Y3B6 208 aa12.02□□□□□ -0.48
RPUSD4-201ENST00000298317 HDGFL3Q9Y3E1 203 aa12.02□□□□□ -0.48
RPUSD4-201ENST00000298317 KIF26BQ2KJY2 2108 aa12.02□□□□□ -0.49
RPUSD4-201ENST00000298317 PRSS37A4D1T9 235 aa12.02□□□□□ -0.49
RPUSD4-201ENST00000298317 FAM221BA6H8Z2 402 aa12.02□□□□□ -0.49
RPUSD4-201ENST00000298317 OR6A2O95222 327 aa12.02□□□□□ -0.49
RPUSD4-201ENST00000298317 MBP02144 154 aa12.02□□□□□ -0.49
RPUSD4-201ENST00000298317 RPS2P15880 293 aaKnown RBP12.02□□□□□ -0.49
RPUSD4-201ENST00000298317 INSM1Q01101 510 aaPredicted RBP12.02□□□□□ -0.49
RPUSD4-201ENST00000298317 SQSTM1Q13501 440 aa12.02□□□□□ -0.49
RPUSD4-201ENST00000298317 KIAA0141Q14154 515 aaPredicted RBP12.02□□□□□ -0.49
RPUSD4-201ENST00000298317 ACTBL2Q562R1 376 aa12.02□□□□□ -0.49
RPUSD4-201ENST00000298317 PTCRAQ6ISU1 281 aaPredicted RBP12.02□□□□□ -0.49
RPUSD4-201ENST00000298317 OPN5Q6U736 354 aa12.02□□□□□ -0.49
RPUSD4-201ENST00000298317 UNQ6494/PRO21346Q6UXR6 183 aa12.02□□□□□ -0.49
RPUSD4-201ENST00000298317 ZNF574Q6ZN55 896 aaPredicted RBP12.02□□□□□ -0.49
RPUSD4-201ENST00000298317 FAM3CQ92520 227 aa12.02□□□□□ -0.49
RPUSD4-201ENST00000298317 TGIF2Q9GZN2 237 aa12.02□□□□□ -0.49
RPUSD4-201ENST00000298317 PARPBPQ9NWS1 579 aa12.02□□□□□ -0.49
RPUSD4-201ENST00000298317 TBC1D3HP0C7X1 549 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 NR2C1P13056 603 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 RAB4AP20338 218 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 HSD11B1P28845 292 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 RPL12P30050 165 aaKnown RBP12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 CCR4P51679 360 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 RPS23P62266 143 aaKnown RBP12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 PLPP4Q5VZY2 271 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 CBLN3Q6UW01 205 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 MARCH3Q86UD3 253 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 ZNF519Q8TB69 540 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 SCARF2Q96GP6 870 aaPredicted RBP12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 S1PR5Q9H228 398 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 FGF22Q9HCT0 170 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 FAM212BQ9NTI7 297 aaPredicted RBP12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 FBLN5Q9UBX5 448 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 MEMO1Q9Y316 297 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 TGFBR3LH3BV60 316 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 SLC16A7O60669 478 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 PI3P19957 117 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 S100A2P29034 98 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 GDI1P31150 447 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 IGFALSP35858 605 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 TOMM34Q15785 309 aaPredicted RBP12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 MED25Q71SY5 747 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 Q7L0L9 218 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 LHFPL1Q86WI0 220 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 UBAC2Q8NBM4 344 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 OR52N4Q8NGI2 321 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 OR6X1Q8NH79 312 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 GPBAR1Q8TDU6 330 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 S100PBPQ96BU1 408 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 SCGB3A2Q96PL1 93 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 CNTNAP3Q9BZ76 1288 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 METTL9Q9H1A3 318 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 ARV1Q9H2C2 271 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 GAR1Q9NY12 217 aaKnown RBP12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 VSX1Q9NZR4 365 aaPredicted RBP12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 GSKIPQ9P0R6 139 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 OR52A1Q9UKL2 312 aa12.01□□□□□ -0.49
RPUSD4-201ENST00000298317 A0A087X0M5 115 aa12□□□□□ -0.49
RPUSD4-201ENST00000298317 A0A1B0GX30 115 aa12□□□□□ -0.49
RPUSD4-201ENST00000298317 MARCH11A6NNE9 402 aa12□□□□□ -0.49
RPUSD4-201ENST00000298317 TMEM14DPA8MWL7 114 aa12□□□□□ -0.49
RPUSD4-201ENST00000298317 K7EPK0 472 aa12□□□□□ -0.49
RPUSD4-201ENST00000298317 BCAT2O15382 392 aaPredicted RBP12□□□□□ -0.49
RPUSD4-201ENST00000298317 NME2P1O60361 137 aa12□□□□□ -0.49
RPUSD4-201ENST00000298317 HIST1H1BP16401 226 aaKnown RBP12□□□□□ -0.49
RPUSD4-201ENST00000298317 CTLA4P16410 223 aa12□□□□□ -0.49
RPUSD4-201ENST00000298317 LMO1P25800 156 aa12□□□□□ -0.49
RPUSD4-201ENST00000298317 FCGR2CP31995 323 aa12□□□□□ -0.49
RPUSD4-201ENST00000298317 CLDN6P56747 220 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms