RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 GUCA2AQ02747 115 aa14.54□□□□□ -0.08
NUP50-218ENST00000493456 RSPO1Q2MKA7 263 aaPredicted RBP14.54□□□□□ -0.08
NUP50-218ENST00000493456 COQ5Q5HYK3 327 aa14.54□□□□□ -0.08
NUP50-218ENST00000493456 C11orf88Q6PI97 169 aa14.54□□□□□ -0.08
NUP50-218ENST00000493456 MRPL21Q7Z2W9 205 aaKnown RBP14.54□□□□□ -0.08
NUP50-218ENST00000493456 OR5R1Q8NH85 324 aa14.54□□□□□ -0.08
NUP50-218ENST00000493456 SLCO4A1Q96BD0 722 aa14.54□□□□□ -0.08
NUP50-218ENST00000493456 DMRTB1Q96MA1 342 aa14.54□□□□□ -0.08
NUP50-218ENST00000493456 ATF6BQ99941 703 aa14.54□□□□□ -0.08
NUP50-218ENST00000493456 RASSF4Q9H2L5 321 aa14.54□□□□□ -0.08
NUP50-218ENST00000493456 FBLN5Q9UBX5 448 aa14.54□□□□□ -0.08
NUP50-218ENST00000493456 ANKRD61A6NGH8 418 aa14.53□□□□□ -0.08
NUP50-218ENST00000493456 F5H5K5 113 aa14.53□□□□□ -0.08
NUP50-218ENST00000493456 J3KTA2 159 aa14.53□□□□□ -0.08
NUP50-218ENST00000493456 SOCS2O14508 198 aa14.53□□□□□ -0.08
NUP50-218ENST00000493456 FFAR1O14842 300 aa14.53□□□□□ -0.08
NUP50-218ENST00000493456 GPR37O15354 613 aa14.53□□□□□ -0.08
NUP50-218ENST00000493456 GYPAP02724 150 aa14.53□□□□□ -0.08
NUP50-218ENST00000493456 CA6P23280 308 aa14.53□□□□□ -0.08
NUP50-218ENST00000493456 EEF1B2P24534 225 aaKnown RBP14.53□□□□□ -0.08
NUP50-218ENST00000493456 MEP1BQ16820 701 aa14.53□□□□□ -0.08
NUP50-218ENST00000493456 CORO6Q6QEF8 472 aa14.53□□□□□ -0.08
NUP50-218ENST00000493456 RRM2BQ7LG56 351 aa14.53□□□□□ -0.08
NUP50-218ENST00000493456 FAM90A1Q86YD7 464 aa14.53□□□□□ -0.08
NUP50-218ENST00000493456 SPERTQ8NA61 448 aa14.53□□□□□ -0.08
NUP50-218ENST00000493456 DYDC1Q8WWB3 177 aa14.53□□□□□ -0.08
NUP50-218ENST00000493456 ST8SIA4Q92187 359 aa14.53□□□□□ -0.08
NUP50-218ENST00000493456 CD300LBA8K4G0 201 aa14.52□□□□□ -0.09
NUP50-218ENST00000493456 RNASEK-C17orf49H0YIS7 233 aa14.52□□□□□ -0.09
NUP50-218ENST00000493456 IMPA2O14732 288 aa14.52□□□□□ -0.09
NUP50-218ENST00000493456 FCN3O75636 299 aa14.52□□□□□ -0.09
NUP50-218ENST00000493456 PPP1R3DO95685 299 aa14.52□□□□□ -0.09
NUP50-218ENST00000493456 PRB2P02812 416 aaPredicted RBP14.52□□□□□ -0.09
NUP50-218ENST00000493456 LCATP04180 440 aa14.52□□□□□ -0.09
NUP50-218ENST00000493456 GABRA5P31644 462 aa14.52□□□□□ -0.09
NUP50-218ENST00000493456 CENPAP49450 140 aa14.52□□□□□ -0.09
NUP50-218ENST00000493456 MZT1Q08AG7 82 aa14.52□□□□□ -0.09
NUP50-218ENST00000493456 TRAP1Q12931 704 aaKnown RBP14.52□□□□□ -0.09
NUP50-218ENST00000493456 TEX36Q5VZQ5 186 aa14.52□□□□□ -0.09
NUP50-218ENST00000493456 TBPL2Q6SJ96 375 aa14.52□□□□□ -0.09
NUP50-218ENST00000493456 CFAP77Q6ZQR2 320 aa14.52□□□□□ -0.09
NUP50-218ENST00000493456 PTCHD4Q6ZW05 846 aa14.52□□□□□ -0.09
NUP50-218ENST00000493456 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.52□□□□□ -0.09
NUP50-218ENST00000493456 CMTM4Q8IZR5 234 aa14.52□□□□□ -0.09
NUP50-218ENST00000493456 OR2T12Q8NG77 320 aa14.52□□□□□ -0.09
NUP50-218ENST00000493456 MRAPQ8TCY5 172 aa14.52□□□□□ -0.09
NUP50-218ENST00000493456 PITX2Q99697 317 aa14.52□□□□□ -0.09
NUP50-218ENST00000493456 SEMA6AQ9H2E6 1030 aa14.52□□□□□ -0.09
NUP50-218ENST00000493456 ANKRD19PQ9H560 264 aa14.52□□□□□ -0.09
NUP50-218ENST00000493456 C1orf123Q9NWV4 160 aa14.52□□□□□ -0.09
NUP50-218ENST00000493456 MRPL15Q9P015 296 aaKnown RBP14.52□□□□□ -0.09
NUP50-218ENST00000493456 ONECUT1Q9UBC0 465 aa14.52□□□□□ -0.09
NUP50-218ENST00000493456 SIGLEC7Q9Y286 467 aa14.52□□□□□ -0.09
NUP50-218ENST00000493456 SNX13Q9Y5W8 968 aa14.52□□□□□ -0.09
NUP50-218ENST00000493456 PTP4A3O75365 173 aa14.51□□□□□ -0.09
NUP50-218ENST00000493456 TXNDC12O95881 172 aa14.51□□□□□ -0.09
NUP50-218ENST00000493456 PAHP00439 452 aa14.51□□□□□ -0.09
NUP50-218ENST00000493456 MDH1P40925 334 aaKnown RBP14.51□□□□□ -0.09
NUP50-218ENST00000493456 RPS6KA3P51812 740 aa14.51□□□□□ -0.09
NUP50-218ENST00000493456 LOXL3P58215 753 aa14.51□□□□□ -0.09
NUP50-218ENST00000493456 AGBL2Q5U5Z8 902 aa14.51□□□□□ -0.09
NUP50-218ENST00000493456 METTL21CQ5VZV1 264 aa14.51□□□□□ -0.09
NUP50-218ENST00000493456 SLC35E4Q6ICL7 350 aa14.51□□□□□ -0.09
NUP50-218ENST00000493456 SLC18B1Q6NT16 456 aa14.51□□□□□ -0.09
NUP50-218ENST00000493456 VTCN1Q7Z7D3 282 aa14.51□□□□□ -0.09
NUP50-218ENST00000493456 GCSAMQ8N6F7 178 aa14.51□□□□□ -0.09
NUP50-218ENST00000493456 LY6G5BQ8NDX9 201 aa14.51□□□□□ -0.09
NUP50-218ENST00000493456 MRGBPQ9NV56 204 aa14.51□□□□□ -0.09
NUP50-218ENST00000493456 IER3IP1Q9Y5U9 82 aa14.51□□□□□ -0.09
NUP50-218ENST00000493456 PLXNB1O43157 2135 aa14.51□□□□□ -0.09
NUP50-218ENST00000493456 IGLV1-36A0A0B4J1U3 117 aa14.5□□□□□ -0.09
NUP50-218ENST00000493456 A6NLC8 198 aa14.5□□□□□ -0.09
NUP50-218ENST00000493456 BBIP1A8MTZ0 92 aa14.5□□□□□ -0.09
NUP50-218ENST00000493456 NPFFO15130 113 aa14.5□□□□□ -0.09
NUP50-218ENST00000493456 LHBP01229 141 aa14.5□□□□□ -0.09
NUP50-218ENST00000493456 GGT2P36268 569 aa14.5□□□□□ -0.09
NUP50-218ENST00000493456 CDKN2AP42771 156 aaKnown RBP14.5□□□□□ -0.09
NUP50-218ENST00000493456 TPTEP56180 551 aa14.5□□□□□ -0.09
NUP50-218ENST00000493456 SLC36A3Q495N2 470 aa14.5□□□□□ -0.09
NUP50-218ENST00000493456 DPY19L2P2Q6ZN68 376 aa14.5□□□□□ -0.09
NUP50-218ENST00000493456 SLC26A10Q8NG04 563 aa14.5□□□□□ -0.09
NUP50-218ENST00000493456 OR2AJ1Q8NGZ0 328 aa14.5□□□□□ -0.09
NUP50-218ENST00000493456 CFHR4Q92496 578 aa14.5□□□□□ -0.09
NUP50-218ENST00000493456 FAM46AQ96IP4 442 aaKnown RBP14.5□□□□□ -0.09
NUP50-218ENST00000493456 TSSK2Q96PF2 358 aa14.5□□□□□ -0.09
NUP50-218ENST00000493456 SIKE1Q9BRV8 207 aa14.5□□□□□ -0.09
NUP50-218ENST00000493456 PPA2Q9H2U2 334 aa14.5□□□□□ -0.09
NUP50-218ENST00000493456 COL7A1Q02388 2944 aa14.49□□□□□ -0.09
NUP50-218ENST00000493456 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.49□□□□□ -0.09
NUP50-218ENST00000493456 hCG_1807616A0A1W2PRN6 198 aa14.49□□□□□ -0.09
NUP50-218ENST00000493456 DCTN6O00399 190 aa14.49□□□□□ -0.09
NUP50-218ENST00000493456 MRASO14807 208 aa14.49□□□□□ -0.09
NUP50-218ENST00000493456 XPNPEP2O43895 674 aa14.49□□□□□ -0.09
NUP50-218ENST00000493456 MUC1P15941 1255 aaPredicted RBP14.49□□□□□ -0.09
NUP50-218ENST00000493456 EFNB2P52799 333 aa14.49□□□□□ -0.09
NUP50-218ENST00000493456 MICBQ29980 383 aa14.49□□□□□ -0.09
NUP50-218ENST00000493456 TSEN54Q7Z6J9 526 aaKnown RBP14.49□□□□□ -0.09
NUP50-218ENST00000493456 NAA40Q86UY6 237 aa14.49□□□□□ -0.09
NUP50-218ENST00000493456 LINC00346Q8IVM7 164 aa14.49□□□□□ -0.09
NUP50-218ENST00000493456 SPTSSAQ969W0 71 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms