RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 IFNL4K9M1U5 179 aa13.66□□□□□ -0.22
DDX55-212ENST00000544738 SBK2P0C263 348 aa13.66□□□□□ -0.22
DDX55-212ENST00000544738 HIST1H1CP16403 213 aaKnown RBP13.66□□□□□ -0.22
DDX55-212ENST00000544738 GSSP48637 474 aa13.66□□□□□ -0.22
DDX55-212ENST00000544738 COX10Q12887 443 aa13.66□□□□□ -0.22
DDX55-212ENST00000544738 TSPAN31Q12999 210 aa13.66□□□□□ -0.22
DDX55-212ENST00000544738 ECH1Q13011 328 aa13.66□□□□□ -0.22
DDX55-212ENST00000544738 OTPQ5XKR4 325 aa13.66□□□□□ -0.22
DDX55-212ENST00000544738 RPL13AP3Q6NVV1 102 aa13.66□□□□□ -0.22
DDX55-212ENST00000544738 C1QL2Q7Z5L3 287 aa13.66□□□□□ -0.22
DDX55-212ENST00000544738 ZBTB46Q86UZ6 589 aa13.66□□□□□ -0.22
DDX55-212ENST00000544738 DEFB107AQ8IZN7 70 aa13.66□□□□□ -0.22
DDX55-212ENST00000544738 KLHL36Q8N4N3 616 aa13.66□□□□□ -0.22
DDX55-212ENST00000544738 SPICQ8N5J4 248 aa13.66□□□□□ -0.22
DDX55-212ENST00000544738 ZNF283Q8N7M2 679 aa13.66□□□□□ -0.22
DDX55-212ENST00000544738 SLC26A10Q8NG04 563 aa13.66□□□□□ -0.22
DDX55-212ENST00000544738 OR4K13Q8NH42 304 aa13.66□□□□□ -0.22
DDX55-212ENST00000544738 NANPQ8TBE9 248 aa13.66□□□□□ -0.22
DDX55-212ENST00000544738 DUX5Q96PT3 197 aa13.66□□□□□ -0.22
DDX55-212ENST00000544738 CDADC1Q9BWV3 514 aa13.66□□□□□ -0.22
DDX55-212ENST00000544738 PPIAL4EA0A075B759 164 aa13.65□□□□□ -0.22
DDX55-212ENST00000544738 PPIAL4CA0A0B4J2A2 164 aa13.65□□□□□ -0.22
DDX55-212ENST00000544738 PPIAL4DF5H284 164 aa13.65□□□□□ -0.22
DDX55-212ENST00000544738 FOXH1O75593 365 aa13.65□□□□□ -0.22
DDX55-212ENST00000544738 IGHV2-70P01814 119 aa13.65□□□□□ -0.22
DDX55-212ENST00000544738 DBHP09172 617 aa13.65□□□□□ -0.22
DDX55-212ENST00000544738 PPIAL4FP0DN26 164 aa13.65□□□□□ -0.22
DDX55-212ENST00000544738 FPR2P25090 351 aa13.65□□□□□ -0.22
DDX55-212ENST00000544738 HMGA2P52926 109 aa13.65□□□□□ -0.22
DDX55-212ENST00000544738 MEP1BQ16820 701 aa13.65□□□□□ -0.22
DDX55-212ENST00000544738 TMEM155Q4W5P6 130 aa13.65□□□□□ -0.22
DDX55-212ENST00000544738 SPRNQ5BIV9 151 aa13.65□□□□□ -0.22
DDX55-212ENST00000544738 RBMS3Q6XE24 437 aaKnown RBP13.65□□□□□ -0.22
DDX55-212ENST00000544738 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.65□□□□□ -0.22
DDX55-212ENST00000544738 OR8G5Q8NG78 346 aa13.65□□□□□ -0.22
DDX55-212ENST00000544738 OR2AJ1Q8NGZ0 328 aa13.65□□□□□ -0.22
DDX55-212ENST00000544738 OR13G1Q8NGZ3 307 aa13.65□□□□□ -0.22
DDX55-212ENST00000544738 ITLN1Q8WWA0 313 aa13.65□□□□□ -0.22
DDX55-212ENST00000544738 ZNF582Q96NG8 517 aaPredicted RBP13.65□□□□□ -0.22
DDX55-212ENST00000544738 TMPRSS13Q9BYE2 586 aa13.65□□□□□ -0.22
DDX55-212ENST00000544738 NTN4Q9HB63 628 aa13.65□□□□□ -0.22
DDX55-212ENST00000544738 RPRD1BQ9NQG5 326 aaKnown RBP13.65□□□□□ -0.22
DDX55-212ENST00000544738 PTTG3PQ9NZH4 202 aa13.65□□□□□ -0.22
DDX55-212ENST00000544738 TANC2Q9HCD6 1990 aa13.65□□□□□ -0.22
DDX55-212ENST00000544738 WNK1Q9H4A3 2382 aa13.65□□□□□ -0.22
DDX55-212ENST00000544738 GPANK1O95872 356 aa13.64□□□□□ -0.23
DDX55-212ENST00000544738 HLA-DQA2P01906 255 aa13.64□□□□□ -0.23
DDX55-212ENST00000544738 LCN2P80188 198 aa13.64□□□□□ -0.23
DDX55-212ENST00000544738 HLXQ14774 488 aaPredicted RBP13.64□□□□□ -0.23
DDX55-212ENST00000544738 PGBD2Q6P3X8 592 aa13.64□□□□□ -0.23
DDX55-212ENST00000544738 CORO6Q6QEF8 472 aa13.64□□□□□ -0.23
DDX55-212ENST00000544738 ZNF620Q6ZNG0 422 aa13.64□□□□□ -0.23
DDX55-212ENST00000544738 COLCA1Q6ZS62 124 aa13.64□□□□□ -0.23
DDX55-212ENST00000544738 LRRC28Q86X40 367 aaPredicted RBP13.64□□□□□ -0.23
DDX55-212ENST00000544738 ARHGAP24Q8N264 748 aa13.64□□□□□ -0.23
DDX55-212ENST00000544738 ATG16L2Q8NAA4 619 aa13.64□□□□□ -0.23
DDX55-212ENST00000544738 OR52L1Q8NGH7 329 aa13.64□□□□□ -0.23
DDX55-212ENST00000544738 OR2V2Q96R30 315 aa13.64□□□□□ -0.23
DDX55-212ENST00000544738 PITX2Q99697 317 aa13.64□□□□□ -0.23
DDX55-212ENST00000544738 PKP2Q99959 881 aa13.64□□□□□ -0.23
DDX55-212ENST00000544738 HCAR1Q9BXC0 346 aa13.64□□□□□ -0.23
DDX55-212ENST00000544738 C7orf69Q9H7B7 122 aa13.64□□□□□ -0.23
DDX55-212ENST00000544738 PATZ1Q9HBE1 687 aaKnown RBP13.64□□□□□ -0.23
DDX55-212ENST00000544738 ACTR3BQ9P1U1 418 aa13.64□□□□□ -0.23
DDX55-212ENST00000544738 KCNG2Q9UJ96 466 aa13.64□□□□□ -0.23
DDX55-212ENST00000544738 OR6C68A6NDL8 312 aa13.63□□□□□ -0.23
DDX55-212ENST00000544738 POM121CA8CG34 1229 aa13.63□□□□□ -0.23
DDX55-212ENST00000544738 SELEP16581 610 aa13.63□□□□□ -0.23
DDX55-212ENST00000544738 SRP9P49458 86 aaKnown RBP13.63□□□□□ -0.23
DDX55-212ENST00000544738 ERFP50548 548 aa13.63□□□□□ -0.23
DDX55-212ENST00000544738 GYS2P54840 703 aa13.63□□□□□ -0.23
DDX55-212ENST00000544738 BTG1P62324 171 aa13.63□□□□□ -0.23
DDX55-212ENST00000544738 OR2T2Q6IF00 324 aa13.63□□□□□ -0.23
DDX55-212ENST00000544738 SLC18B1Q6NT16 456 aa13.63□□□□□ -0.23
DDX55-212ENST00000544738 ZNF771Q7L3S4 317 aaPredicted RBP13.63□□□□□ -0.23
DDX55-212ENST00000544738 OR5AS1Q8N127 324 aa13.63□□□□□ -0.23
DDX55-212ENST00000544738 MUC20Q8N307 709 aaPredicted RBP13.63□□□□□ -0.23
DDX55-212ENST00000544738 SDR9C7Q8NEX9 313 aa13.63□□□□□ -0.23
DDX55-212ENST00000544738 OR52E2Q8NGJ4 325 aa13.63□□□□□ -0.23
DDX55-212ENST00000544738 POP5Q969H6 163 aaKnown RBP13.63□□□□□ -0.23
DDX55-212ENST00000544738 ATF6BQ99941 703 aa13.63□□□□□ -0.23
DDX55-212ENST00000544738 TRIM15Q9C019 465 aa13.63□□□□□ -0.23
DDX55-212ENST00000544738 DCAF16Q9NXF7 216 aa13.63□□□□□ -0.23
DDX55-212ENST00000544738 CYB5R1Q9UHQ9 305 aa13.63□□□□□ -0.23
DDX55-212ENST00000544738 LYVE1Q9Y5Y7 322 aa13.63□□□□□ -0.23
DDX55-212ENST00000544738 CDH10Q9Y6N8 788 aa13.63□□□□□ -0.23
DDX55-212ENST00000544738 IQCF6A8MYZ5 107 aa13.62□□□□□ -0.23
DDX55-212ENST00000544738 TNFRSF11BO00300 401 aa13.62□□□□□ -0.23
DDX55-212ENST00000544738 ALX3O95076 343 aa13.62□□□□□ -0.23
DDX55-212ENST00000544738 ZNF823P16415 610 aa13.62□□□□□ -0.23
DDX55-212ENST00000544738 CPT2P23786 658 aa13.62□□□□□ -0.23
DDX55-212ENST00000544738 PRTN3P24158 256 aa13.62□□□□□ -0.23
DDX55-212ENST00000544738 MDH2P40926 338 aaKnown RBP13.62□□□□□ -0.23
DDX55-212ENST00000544738 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.62□□□□□ -0.23
DDX55-212ENST00000544738 MALLQ13021 153 aa13.62□□□□□ -0.23
DDX55-212ENST00000544738 RSPO1Q2MKA7 263 aaPredicted RBP13.62□□□□□ -0.23
DDX55-212ENST00000544738 SLC35F1Q5T1Q4 408 aa13.62□□□□□ -0.23
DDX55-212ENST00000544738 CYP2R1Q6VVX0 501 aa13.62□□□□□ -0.23
DDX55-212ENST00000544738 LINC00346Q8IVM7 164 aa13.62□□□□□ -0.23
DDX55-212ENST00000544738 SIGLECL1Q8N7X8 197 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms