RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 MS4A7Q9GZW8 240 aaPredicted RBP16.5■□□□□ 0.23
TNFRSF1B-204ENST00000536782 TMEM165Q9HC07 324 aa16.5■□□□□ 0.23
TNFRSF1B-204ENST00000536782 MIOXQ9UGB7 285 aa16.5■□□□□ 0.23
TNFRSF1B-204ENST00000536782 LHFPL6Q9Y693 200 aa16.5■□□□□ 0.23
TNFRSF1B-204ENST00000536782 TGP01266 2768 aa16.49■□□□□ 0.23
TNFRSF1B-204ENST00000536782 H0YL77 283 aa16.49■□□□□ 0.23
TNFRSF1B-204ENST00000536782 ZNF205O95201 554 aa16.49■□□□□ 0.23
TNFRSF1B-204ENST00000536782 CYB5R3P00387 301 aaPredicted RBP16.49■□□□□ 0.23
TNFRSF1B-204ENST00000536782 PRDX6P30041 224 aa16.49■□□□□ 0.23
TNFRSF1B-204ENST00000536782 CD80P33681 288 aa16.49■□□□□ 0.23
TNFRSF1B-204ENST00000536782 KRT72Q14CN4 511 aa16.49■□□□□ 0.23
TNFRSF1B-204ENST00000536782 SEC23BQ15437 767 aa16.49■□□□□ 0.23
TNFRSF1B-204ENST00000536782 MEP1BQ16820 701 aa16.49■□□□□ 0.23
TNFRSF1B-204ENST00000536782 SMARCD3Q6STE5 483 aa16.49■□□□□ 0.23
TNFRSF1B-204ENST00000536782 BTNL3Q6UXE8 466 aa16.49■□□□□ 0.23
TNFRSF1B-204ENST00000536782 LRRN1Q6UXK5 716 aa16.49■□□□□ 0.23
TNFRSF1B-204ENST00000536782 ZNF48Q96MX3 618 aaPredicted RBP16.49■□□□□ 0.23
TNFRSF1B-204ENST00000536782 ERMAPQ96PL5 475 aaPredicted RBP16.49■□□□□ 0.23
TNFRSF1B-204ENST00000536782 SLC30A2Q9BRI3 323 aa16.49■□□□□ 0.23
TNFRSF1B-204ENST00000536782 C1QTNF5Q9BXJ0 243 aa16.49■□□□□ 0.23
TNFRSF1B-204ENST00000536782 ABCD2Q9UBJ2 740 aa16.49■□□□□ 0.23
TNFRSF1B-204ENST00000536782 SAMD4AQ9UPU9 718 aaKnown RBP16.49■□□□□ 0.23
TNFRSF1B-204ENST00000536782 LRRC30A6NM36 301 aa16.48■□□□□ 0.23
TNFRSF1B-204ENST00000536782 IQCF6A8MYZ5 107 aa16.48■□□□□ 0.23
TNFRSF1B-204ENST00000536782 F5H5P2 479 aa16.48■□□□□ 0.23
TNFRSF1B-204ENST00000536782 DCTN6O00399 190 aa16.48■□□□□ 0.23
TNFRSF1B-204ENST00000536782 PPP1R3DO95685 299 aa16.48■□□□□ 0.23
TNFRSF1B-204ENST00000536782 PPIAL4GP0DN37 164 aa16.48■□□□□ 0.23
TNFRSF1B-204ENST00000536782 PSME3P61289 254 aa16.48■□□□□ 0.23
TNFRSF1B-204ENST00000536782 GNB2P62879 340 aa16.48■□□□□ 0.23
TNFRSF1B-204ENST00000536782 PAX2Q02962 417 aa16.48■□□□□ 0.23
TNFRSF1B-204ENST00000536782 COX10Q12887 443 aa16.48■□□□□ 0.23
TNFRSF1B-204ENST00000536782 ZNF181Q2M3W8 571 aa16.48■□□□□ 0.23
TNFRSF1B-204ENST00000536782 GLYATQ6IB77 296 aa16.48■□□□□ 0.23
TNFRSF1B-204ENST00000536782 CORO6Q6QEF8 472 aa16.48■□□□□ 0.23
TNFRSF1B-204ENST00000536782 MOGAT3Q86VF5 341 aa16.48■□□□□ 0.23
TNFRSF1B-204ENST00000536782 KLBQ86Z14 1044 aa16.48■□□□□ 0.23
TNFRSF1B-204ENST00000536782 C1orf87Q8N0U7 546 aa16.48■□□□□ 0.23
TNFRSF1B-204ENST00000536782 PARP8Q8N3A8 854 aa16.48■□□□□ 0.23
TNFRSF1B-204ENST00000536782 BHLHE23Q8NDY6 225 aa16.48■□□□□ 0.23
TNFRSF1B-204ENST00000536782 OR52J3Q8NH60 311 aa16.48■□□□□ 0.23
TNFRSF1B-204ENST00000536782 SLC25A28Q96A46 364 aa16.48■□□□□ 0.23
TNFRSF1B-204ENST00000536782 PLEKHA8Q96JA3 519 aa16.48■□□□□ 0.23
TNFRSF1B-204ENST00000536782 C7orf34Q96L11 122 aa16.48■□□□□ 0.23
TNFRSF1B-204ENST00000536782 C1orf147Q96MC9 270 aaPredicted RBP16.48■□□□□ 0.23
TNFRSF1B-204ENST00000536782 HCAR1Q9BXC0 346 aa16.48■□□□□ 0.23
TNFRSF1B-204ENST00000536782 SRA1Q9HD15 236 aaKnown RBP16.48■□□□□ 0.23
TNFRSF1B-204ENST00000536782 DCAF13Q9NV06 445 aaKnown RBP16.48■□□□□ 0.23
TNFRSF1B-204ENST00000536782 B9D1Q9UPM9 204 aa16.48■□□□□ 0.23
TNFRSF1B-204ENST00000536782 IGLV1-36A0A0B4J1U3 117 aa16.47■□□□□ 0.23
TNFRSF1B-204ENST00000536782 IGHV3-64DA0A0J9YX35 117 aa16.47■□□□□ 0.23
TNFRSF1B-204ENST00000536782 TMPRSS2O15393 492 aa16.47■□□□□ 0.23
TNFRSF1B-204ENST00000536782 MLNRO43193 412 aa16.47■□□□□ 0.23
TNFRSF1B-204ENST00000536782 GMNNO75496 209 aa16.47■□□□□ 0.23
TNFRSF1B-204ENST00000536782 DIRAS1O95057 198 aa16.47■□□□□ 0.23
TNFRSF1B-204ENST00000536782 FSTL3O95633 263 aa16.47■□□□□ 0.23
TNFRSF1B-204ENST00000536782 RNASE1P07998 156 aaKnown RBP16.47■□□□□ 0.23
TNFRSF1B-204ENST00000536782 SELEP16581 610 aa16.47■□□□□ 0.23
TNFRSF1B-204ENST00000536782 MTNR1AP48039 350 aa16.47■□□□□ 0.23
TNFRSF1B-204ENST00000536782 GYS2P54840 703 aa16.47■□□□□ 0.23
TNFRSF1B-204ENST00000536782 PRR31Q5SQ13 230 aa16.47■□□□□ 0.23
TNFRSF1B-204ENST00000536782 LEG1Q6P5S2 330 aa16.47■□□□□ 0.23
TNFRSF1B-204ENST00000536782 JAZF1Q86VZ6 243 aa16.47■□□□□ 0.23
TNFRSF1B-204ENST00000536782 FANK1Q8TC84 345 aa16.47■□□□□ 0.23
TNFRSF1B-204ENST00000536782 RAB40AQ8WXH6 277 aa16.47■□□□□ 0.23
TNFRSF1B-204ENST00000536782 NEIL1Q96FI4 390 aaPredicted RBP16.47■□□□□ 0.23
TNFRSF1B-204ENST00000536782 DHRS1Q96LJ7 313 aa16.47■□□□□ 0.23
TNFRSF1B-204ENST00000536782 TMEM246Q9BRR3 403 aa16.47■□□□□ 0.23
TNFRSF1B-204ENST00000536782 WDR76Q9H967 626 aa16.47■□□□□ 0.23
TNFRSF1B-204ENST00000536782 TMEM100Q9NV29 134 aa16.47■□□□□ 0.23
TNFRSF1B-204ENST00000536782 IGHV3OR16-10A0A075B7F0 116 aa16.46■□□□□ 0.23
TNFRSF1B-204ENST00000536782 IGHV2-70DA0A0C4DH43 119 aa16.46■□□□□ 0.23
TNFRSF1B-204ENST00000536782 CLDN34H7C241 214 aa16.46■□□□□ 0.23
TNFRSF1B-204ENST00000536782 RENP00797 406 aa16.46■□□□□ 0.23
TNFRSF1B-204ENST00000536782 IGHV4-38-2P0DP08 117 aa16.46■□□□□ 0.23
TNFRSF1B-204ENST00000536782 FPR3P25089 353 aa16.46■□□□□ 0.23
TNFRSF1B-204ENST00000536782 SLC6A6P31641 620 aa16.46■□□□□ 0.23
TNFRSF1B-204ENST00000536782 RSPO1Q2MKA7 263 aaPredicted RBP16.46■□□□□ 0.23
TNFRSF1B-204ENST00000536782 RFX4Q33E94 735 aa16.46■□□□□ 0.23
TNFRSF1B-204ENST00000536782 ZNF404Q494X3 552 aa16.46■□□□□ 0.23
TNFRSF1B-204ENST00000536782 COLCA1Q6ZS62 124 aa16.46■□□□□ 0.23
TNFRSF1B-204ENST00000536782 NLRC3Q7RTR2 1065 aa16.46■□□□□ 0.23
TNFRSF1B-204ENST00000536782 PIGWQ7Z7B1 504 aa16.46■□□□□ 0.23
TNFRSF1B-204ENST00000536782 OR6V1Q8N148 313 aa16.46■□□□□ 0.23
TNFRSF1B-204ENST00000536782 FAM86B1Q8N7N1 296 aa16.46■□□□□ 0.23
TNFRSF1B-204ENST00000536782 SLC26A10Q8NG04 563 aa16.46■□□□□ 0.23
TNFRSF1B-204ENST00000536782 OR8B3Q8NGG8 313 aa16.46■□□□□ 0.23
TNFRSF1B-204ENST00000536782 UPRTQ96BW1 309 aa16.46■□□□□ 0.23
TNFRSF1B-204ENST00000536782 OR8B2Q96RD0 313 aa16.46■□□□□ 0.23
TNFRSF1B-204ENST00000536782 NMNAT3Q96T66 252 aa16.46■□□□□ 0.23
TNFRSF1B-204ENST00000536782 FUZQ9BT04 418 aa16.46■□□□□ 0.23
TNFRSF1B-204ENST00000536782 CDADC1Q9BWV3 514 aa16.46■□□□□ 0.23
TNFRSF1B-204ENST00000536782 SPAG4Q9NPE6 437 aa16.46■□□□□ 0.23
TNFRSF1B-204ENST00000536782 A0A1B0GWJ7 208 aa16.45■□□□□ 0.22
TNFRSF1B-204ENST00000536782 ARPC3O15145 178 aa16.45■□□□□ 0.22
TNFRSF1B-204ENST00000536782 HLA-DPB1P04440 258 aa16.45■□□□□ 0.22
TNFRSF1B-204ENST00000536782 IRF2P14316 349 aa16.45■□□□□ 0.22
TNFRSF1B-204ENST00000536782 GATA4P43694 442 aa16.45■□□□□ 0.22
TNFRSF1B-204ENST00000536782 SMIM11AP58511 58 aa16.45■□□□□ 0.22
TNFRSF1B-204ENST00000536782 ECH1Q13011 328 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms