RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 EEF1E1O43324 174 aaKnown RBP11.96□□□□□ -0.49
VAPB-202ENST00000395802 SYNGR3O43761 229 aa11.96□□□□□ -0.49
VAPB-202ENST00000395802 LYZL6O75951 148 aa11.96□□□□□ -0.49
VAPB-202ENST00000395802 PSMB10P40306 273 aa11.96□□□□□ -0.49
VAPB-202ENST00000395802 HTR5AP47898 357 aa11.96□□□□□ -0.49
VAPB-202ENST00000395802 TUBA1BP68363 451 aa11.96□□□□□ -0.49
VAPB-202ENST00000395802 DRAM2Q6UX65 266 aa11.96□□□□□ -0.49
VAPB-202ENST00000395802 TUBA1AQ71U36 451 aa11.96□□□□□ -0.49
VAPB-202ENST00000395802 BHLHA15Q7RTS1 189 aaPredicted RBP11.96□□□□□ -0.49
VAPB-202ENST00000395802 CXorf67Q86X51 503 aaPredicted RBP11.96□□□□□ -0.49
VAPB-202ENST00000395802 ZNF283Q8N7M2 679 aa11.96□□□□□ -0.49
VAPB-202ENST00000395802 ZNF676Q8N7Q3 588 aa11.96□□□□□ -0.49
VAPB-202ENST00000395802 KBTBD8Q8NFY9 601 aa11.96□□□□□ -0.49
VAPB-202ENST00000395802 OR10S1Q8NGN2 331 aa11.96□□□□□ -0.49
VAPB-202ENST00000395802 RPS4Y2Q8TD47 263 aa11.96□□□□□ -0.49
VAPB-202ENST00000395802 PHYHIPQ92561 330 aa11.96□□□□□ -0.49
VAPB-202ENST00000395802 DCLRE1CQ96SD1 692 aaKnown RBP11.96□□□□□ -0.49
VAPB-202ENST00000395802 TMED9Q9BVK6 235 aa11.96□□□□□ -0.49
VAPB-202ENST00000395802 GTF2A1LQ9UNN4 478 aa11.96□□□□□ -0.49
VAPB-202ENST00000395802 AMDHD2Q9Y303 409 aa11.96□□□□□ -0.49
VAPB-202ENST00000395802 GRIP1Q9Y3R0 1128 aa11.96□□□□□ -0.49
VAPB-202ENST00000395802 SIRT4Q9Y6E7 314 aaPredicted RBP11.96□□□□□ -0.49
VAPB-202ENST00000395802 TRDV1A0A1B0GX56 115 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 HLA-HP01893 362 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 UBCP0CG48 685 aaKnown RBP11.95□□□□□ -0.5
VAPB-202ENST00000395802 PSMB1P20618 241 aaKnown RBP11.95□□□□□ -0.5
VAPB-202ENST00000395802 MAPK3P27361 379 aaPredicted RBP11.95□□□□□ -0.5
VAPB-202ENST00000395802 SLC6A9P48067 706 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 CX3CR1P49238 355 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 FOXG1P55316 489 aaPredicted RBP11.95□□□□□ -0.5
VAPB-202ENST00000395802 GALK2Q01415 458 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 MRPL49Q13405 166 aaKnown RBP11.95□□□□□ -0.5
VAPB-202ENST00000395802 HIKESHIQ53FT3 197 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 PABPC1L2AQ5JQF8 200 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 BCL2L15Q5TBC7 163 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 ZNF774Q6NX45 483 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 LUZP2Q86TE4 346 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 STEAP2Q8NFT2 490 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 OR52H1Q8NGJ2 320 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 TBC1D15Q8TC07 691 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 ZFAND2BQ8WV99 257 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 ASB5Q8WWX0 329 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 TMEM203Q969S6 136 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 PGLYRP3Q96LB9 341 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 C4orf45Q96LM5 186 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 SLIRPQ9GZT3 109 aaKnown RBP11.95□□□□□ -0.5
VAPB-202ENST00000395802 EXOSC4Q9NPD3 245 aaKnown RBP11.95□□□□□ -0.5
VAPB-202ENST00000395802 FRRS1LQ9P0K9 344 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 OR52A1Q9UKL2 312 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 PMF1-BGLAPU3KQ54 211 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 F5H5K5 113 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 M0R135 149 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 GATBO75879 557 aaKnown RBP11.95□□□□□ -0.5
VAPB-202ENST00000395802 RGS9O75916 674 aaPredicted RBP11.95□□□□□ -0.5
VAPB-202ENST00000395802 CLPXO76031 633 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 ZFPL1O95159 310 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 CHRNB4P30926 498 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 FGF9P31371 208 aaPredicted RBP11.95□□□□□ -0.5
VAPB-202ENST00000395802 OTX1P32242 354 aaPredicted RBP11.95□□□□□ -0.5
VAPB-202ENST00000395802 DGUOKQ16854 277 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 SLC25A35Q3KQZ1 300 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 TMEM244Q5VVB8 128 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 CATSPERDQ86XM0 798 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 ZNF799Q96GE5 643 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 DACH2Q96NX9 599 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 WNT5BQ9H1J7 359 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 OR10A4Q9H209 315 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 TXNL4BQ9NX01 149 aaKnown RBP11.95□□□□□ -0.5
VAPB-202ENST00000395802 ZNF224Q9NZL3 707 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 NUFIP1Q9UHK0 495 aaKnown RBP11.95□□□□□ -0.5
VAPB-202ENST00000395802 ZNF391Q9UJN7 358 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 SHANK1Q9Y566 2161 aa11.95□□□□□ -0.5
VAPB-202ENST00000395802 ISG15P05161 165 aa11.94□□□□□ -0.5
VAPB-202ENST00000395802 ANXA2P07355 339 aaKnown RBP11.94□□□□□ -0.5
VAPB-202ENST00000395802 ZNF12P17014 697 aa11.94□□□□□ -0.5
VAPB-202ENST00000395802 STOMP27105 288 aa11.94□□□□□ -0.5
VAPB-202ENST00000395802 APLNRP35414 380 aa11.94□□□□□ -0.5
VAPB-202ENST00000395802 PRKXP51817 358 aa11.94□□□□□ -0.5
VAPB-202ENST00000395802 NANOS3P60323 173 aaKnown RBP11.94□□□□□ -0.5
VAPB-202ENST00000395802 FABP5Q01469 135 aa11.94□□□□□ -0.5
VAPB-202ENST00000395802 WDR38Q5JTN6 314 aa11.94□□□□□ -0.5
VAPB-202ENST00000395802 TIMM23BQ5SRD1 257 aa11.94□□□□□ -0.5
VAPB-202ENST00000395802 ZNF474Q6S9Z5 364 aaPredicted RBP11.94□□□□□ -0.5
VAPB-202ENST00000395802 UNQ6126/PRO20091Q6UXV3 157 aa11.94□□□□□ -0.5
VAPB-202ENST00000395802 OR1J2Q8NGS2 313 aa11.94□□□□□ -0.5
VAPB-202ENST00000395802 ABHD4Q8TB40 342 aa11.94□□□□□ -0.5
VAPB-202ENST00000395802 GPR148Q8TDV2 347 aa11.94□□□□□ -0.5
VAPB-202ENST00000395802 MUCL1Q96DR8 90 aa11.94□□□□□ -0.5
VAPB-202ENST00000395802 KCTD7Q96MP8 289 aa11.94□□□□□ -0.5
VAPB-202ENST00000395802 SLC17A5Q9NRA2 495 aa11.94□□□□□ -0.5
VAPB-202ENST00000395802 FAM206AQ9NX38 181 aa11.94□□□□□ -0.5
VAPB-202ENST00000395802 B3GNT2Q9NY97 397 aa11.94□□□□□ -0.5
VAPB-202ENST00000395802 JKAMPQ9P055 326 aa11.94□□□□□ -0.5
VAPB-202ENST00000395802 NCOA6Q14686 2063 aaPredicted RBP11.93□□□□□ -0.5
VAPB-202ENST00000395802 OR5H1A6NKK0 313 aa11.93□□□□□ -0.5
VAPB-202ENST00000395802 OR4C45A6NMZ5 311 aa11.93□□□□□ -0.5
VAPB-202ENST00000395802 SRSF10O75494 262 aaKnown RBP11.93□□□□□ -0.5
VAPB-202ENST00000395802 ARL6IP5O75915 188 aa11.93□□□□□ -0.5
VAPB-202ENST00000395802 SERPINA5P05154 406 aa11.93□□□□□ -0.5
VAPB-202ENST00000395802 PATE4P0C8F1 98 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms