RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 DGCR6LQ9BY27 220 aa14.24□□□□□ -0.13
USB1-211ENST00000565662 OPA3Q9H6K4 179 aa14.24□□□□□ -0.13
USB1-211ENST00000565662 RPRD1BQ9NQG5 326 aaKnown RBP14.24□□□□□ -0.13
USB1-211ENST00000565662 IL20RAQ9UHF4 553 aa14.24□□□□□ -0.13
USB1-211ENST00000565662 A0A0A6YYJ9 748 aa14.23□□□□□ -0.13
USB1-211ENST00000565662 AQP12BA6NM10 295 aa14.23□□□□□ -0.13
USB1-211ENST00000565662 LYNX1G3V0Z9 82 aa14.23□□□□□ -0.13
USB1-211ENST00000565662 J3QLI3 93 aa14.23□□□□□ -0.13
USB1-211ENST00000565662 SPRY3O43610 288 aa14.23□□□□□ -0.13
USB1-211ENST00000565662 HLA-DQA2P01906 255 aa14.23□□□□□ -0.13
USB1-211ENST00000565662 LYNX1P0DP58 116 aa14.23□□□□□ -0.13
USB1-211ENST00000565662 TNFAIP6P98066 277 aaPredicted RBP14.23□□□□□ -0.13
USB1-211ENST00000565662 MALLQ13021 153 aa14.23□□□□□ -0.13
USB1-211ENST00000565662 PSG7Q13046 419 aa14.23□□□□□ -0.13
USB1-211ENST00000565662 CCNIQ14094 377 aa14.23□□□□□ -0.13
USB1-211ENST00000565662 TSTQ16762 297 aaKnown RBP14.23□□□□□ -0.13
USB1-211ENST00000565662 AQP12AQ8IXF9 295 aa14.23□□□□□ -0.13
USB1-211ENST00000565662 SPICQ8N5J4 248 aa14.23□□□□□ -0.13
USB1-211ENST00000565662 OR2T33Q8NG76 320 aa14.23□□□□□ -0.13
USB1-211ENST00000565662 OR4K13Q8NH42 304 aa14.23□□□□□ -0.13
USB1-211ENST00000565662 SPTSSAQ969W0 71 aa14.23□□□□□ -0.13
USB1-211ENST00000565662 NMNAT3Q96T66 252 aa14.23□□□□□ -0.13
USB1-211ENST00000565662 GPA33Q99795 319 aa14.23□□□□□ -0.13
USB1-211ENST00000565662 ATF6BQ99941 703 aa14.23□□□□□ -0.13
USB1-211ENST00000565662 SLC22A4Q9H015 551 aa14.23□□□□□ -0.13
USB1-211ENST00000565662 ZNF665Q9H7R5 613 aa14.23□□□□□ -0.13
USB1-211ENST00000565662 TBC1D23Q9NUY8 699 aa14.23□□□□□ -0.13
USB1-211ENST00000565662 SAMHD1Q9Y3Z3 626 aaKnown RBP14.23□□□□□ -0.13
USB1-211ENST00000565662 A0A0G2JMP0 313 aa14.22□□□□□ -0.13
USB1-211ENST00000565662 A0A0X1KG70 313 aa14.22□□□□□ -0.13
USB1-211ENST00000565662 NGFP01138 241 aa14.22□□□□□ -0.13
USB1-211ENST00000565662 ZNF3P17036 446 aa14.22□□□□□ -0.13
USB1-211ENST00000565662 ATP6V1B2P21281 511 aa14.22□□□□□ -0.13
USB1-211ENST00000565662 MSX2P35548 267 aaPredicted RBP14.22□□□□□ -0.13
USB1-211ENST00000565662 TPTEP56180 551 aa14.22□□□□□ -0.13
USB1-211ENST00000565662 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.22□□□□□ -0.13
USB1-211ENST00000565662 MICAQ29983 383 aa14.22□□□□□ -0.13
USB1-211ENST00000565662 CCDC92Q53HC0 331 aaPredicted RBP14.22□□□□□ -0.13
USB1-211ENST00000565662 SHQ1Q6PI26 577 aaKnown RBP14.22□□□□□ -0.13
USB1-211ENST00000565662 CD300LDQ6UXZ3 194 aa14.22□□□□□ -0.13
USB1-211ENST00000565662 OR6V1Q8N148 313 aa14.22□□□□□ -0.13
USB1-211ENST00000565662 MUC20Q8N307 709 aaPredicted RBP14.22□□□□□ -0.13
USB1-211ENST00000565662 SDR9C7Q8NEX9 313 aa14.22□□□□□ -0.13
USB1-211ENST00000565662 OR4M2Q8NGB6 313 aa14.22□□□□□ -0.13
USB1-211ENST00000565662 OR13G1Q8NGZ3 307 aa14.22□□□□□ -0.13
USB1-211ENST00000565662 ST7LQ8TDW4 575 aa14.22□□□□□ -0.13
USB1-211ENST00000565662 CCL17Q92583 94 aa14.22□□□□□ -0.13
USB1-211ENST00000565662 ZNF582Q96NG8 517 aaPredicted RBP14.22□□□□□ -0.13
USB1-211ENST00000565662 GAL3ST1Q99999 423 aa14.22□□□□□ -0.13
USB1-211ENST00000565662 TEX12Q9BXU0 123 aa14.22□□□□□ -0.13
USB1-211ENST00000565662 SP140LQ9H930 580 aa14.22□□□□□ -0.13
USB1-211ENST00000565662 SRA1Q9HD15 236 aaKnown RBP14.22□□□□□ -0.13
USB1-211ENST00000565662 CYB5R1Q9UHQ9 305 aa14.22□□□□□ -0.13
USB1-211ENST00000565662 WIPI2Q9Y4P8 454 aa14.22□□□□□ -0.13
USB1-211ENST00000565662 LHFPL6Q9Y693 200 aa14.22□□□□□ -0.13
USB1-211ENST00000565662 PPIAL4EA0A075B759 164 aa14.21□□□□□ -0.13
USB1-211ENST00000565662 PPIAL4CA0A0B4J2A2 164 aa14.21□□□□□ -0.13
USB1-211ENST00000565662 TCRBV5S2A0A599 114 aa14.21□□□□□ -0.13
USB1-211ENST00000565662 ZSCAN5BA6NJL1 495 aa14.21□□□□□ -0.13
USB1-211ENST00000565662 RNF212BA8MTL3 300 aa14.21□□□□□ -0.13
USB1-211ENST00000565662 PPIAL4DF5H284 164 aa14.21□□□□□ -0.13
USB1-211ENST00000565662 BHLHE40O14503 412 aa14.21□□□□□ -0.13
USB1-211ENST00000565662 RER1O15258 196 aa14.21□□□□□ -0.13
USB1-211ENST00000565662 CDC14BO60729 498 aa14.21□□□□□ -0.13
USB1-211ENST00000565662 UBOX5O94941 541 aa14.21□□□□□ -0.13
USB1-211ENST00000565662 PNPP00491 289 aa14.21□□□□□ -0.13
USB1-211ENST00000565662 APOC1P02654 83 aa14.21□□□□□ -0.13
USB1-211ENST00000565662 SCG5P05408 212 aa14.21□□□□□ -0.13
USB1-211ENST00000565662 PPIAL4FP0DN26 164 aa14.21□□□□□ -0.13
USB1-211ENST00000565662 SRP9P49458 86 aaKnown RBP14.21□□□□□ -0.13
USB1-211ENST00000565662 C1orf87Q8N0U7 546 aa14.21□□□□□ -0.13
USB1-211ENST00000565662 LNX2Q8N448 690 aa14.21□□□□□ -0.13
USB1-211ENST00000565662 AQP11Q8NBQ7 271 aa14.21□□□□□ -0.13
USB1-211ENST00000565662 PROKR2Q8NFJ6 384 aa14.21□□□□□ -0.13
USB1-211ENST00000565662 OR52E2Q8NGJ4 325 aa14.21□□□□□ -0.13
USB1-211ENST00000565662 TEX47Q8TBZ9 253 aa14.21□□□□□ -0.13
USB1-211ENST00000565662 ERGIC1Q969X5 290 aa14.21□□□□□ -0.13
USB1-211ENST00000565662 PITX2Q99697 317 aa14.21□□□□□ -0.13
USB1-211ENST00000565662 BTBD10Q9BSF8 475 aa14.21□□□□□ -0.13
USB1-211ENST00000565662 C1QTNF5Q9BXJ0 243 aa14.21□□□□□ -0.13
USB1-211ENST00000565662 HIF1ANQ9NWT6 349 aa14.21□□□□□ -0.13
USB1-211ENST00000565662 ATRQ13535 2644 aa14.2□□□□□ -0.14
USB1-211ENST00000565662 LRRC30A6NM36 301 aa14.2□□□□□ -0.14
USB1-211ENST00000565662 RIIAD1A6NNX1 92 aa14.2□□□□□ -0.14
USB1-211ENST00000565662 FSTL3O95633 263 aa14.2□□□□□ -0.14
USB1-211ENST00000565662 IGHV2-5P01817 119 aa14.2□□□□□ -0.14
USB1-211ENST00000565662 IL2RGP31785 369 aa14.2□□□□□ -0.14
USB1-211ENST00000565662 LMO4P61968 165 aa14.2□□□□□ -0.14
USB1-211ENST00000565662 TMEM155Q4W5P6 130 aa14.2□□□□□ -0.14
USB1-211ENST00000565662 ZNF770Q6IQ21 691 aaPredicted RBP14.2□□□□□ -0.14
USB1-211ENST00000565662 SLC18B1Q6NT16 456 aa14.2□□□□□ -0.14
USB1-211ENST00000565662 COLCA1Q6ZS62 124 aa14.2□□□□□ -0.14
USB1-211ENST00000565662 TRPM8Q7Z2W7 1104 aa14.2□□□□□ -0.14
USB1-211ENST00000565662 KLHL36Q8N4N3 616 aa14.2□□□□□ -0.14
USB1-211ENST00000565662 CELF2-AS1Q8N7Q2 184 aa14.2□□□□□ -0.14
USB1-211ENST00000565662 OR8G5Q8NG78 346 aa14.2□□□□□ -0.14
USB1-211ENST00000565662 OR2Z1Q8NG97 314 aa14.2□□□□□ -0.14
USB1-211ENST00000565662 OR9Q2Q8NGE9 314 aa14.2□□□□□ -0.14
USB1-211ENST00000565662 DNAJC9Q8WXX5 260 aa14.2□□□□□ -0.14
USB1-211ENST00000565662 CMBLQ96DG6 245 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms