RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 BSPH1Q075Z2 132 aa11.26□□□□□ -0.61
PABPC1-205ENST00000518196 RAB40BQ12829 278 aa11.26□□□□□ -0.61
PABPC1-205ENST00000518196 SMN1Q16637 294 aaKnown RBP11.26□□□□□ -0.61
PABPC1-205ENST00000518196 C6orf141Q5SZD1 244 aa11.26□□□□□ -0.61
PABPC1-205ENST00000518196 KCTD18Q6PI47 426 aaPredicted RBP11.26□□□□□ -0.61
PABPC1-205ENST00000518196 TREML4Q6UXN2 200 aa11.26□□□□□ -0.61
PABPC1-205ENST00000518196 ZNF584Q8IVC4 421 aa11.26□□□□□ -0.61
PABPC1-205ENST00000518196 CPEB3Q8NE35 698 aaKnown RBP11.26□□□□□ -0.61
PABPC1-205ENST00000518196 OR4F15Q8NGB8 312 aa11.26□□□□□ -0.61
PABPC1-205ENST00000518196 OR2T27Q8NH04 317 aa11.26□□□□□ -0.61
PABPC1-205ENST00000518196 LGALS12Q96DT0 336 aa11.26□□□□□ -0.61
PABPC1-205ENST00000518196 MAP6Q96JE9 813 aa11.26□□□□□ -0.61
PABPC1-205ENST00000518196 RADILQ96JH8 1075 aa11.26□□□□□ -0.61
PABPC1-205ENST00000518196 MYCBPQ99417 103 aaPredicted RBP11.26□□□□□ -0.61
PABPC1-205ENST00000518196 ATF6BQ99941 703 aa11.26□□□□□ -0.61
PABPC1-205ENST00000518196 ABHD6Q9BV23 337 aa11.26□□□□□ -0.61
PABPC1-205ENST00000518196 CENPMQ9NSP4 180 aa11.26□□□□□ -0.61
PABPC1-205ENST00000518196 PLCXD1Q9NUJ7 323 aa11.26□□□□□ -0.61
PABPC1-205ENST00000518196 MRPS18AQ9NVS2 196 aaKnown RBP11.26□□□□□ -0.61
PABPC1-205ENST00000518196 SCN3BQ9NY72 215 aa11.26□□□□□ -0.61
PABPC1-205ENST00000518196 SPEF1Q9Y4P9 236 aa11.26□□□□□ -0.61
PABPC1-205ENST00000518196 IGHV2OR16-5A0A0B4J2B6 119 aa11.25□□□□□ -0.61
PABPC1-205ENST00000518196 C5orf49A4QMS7 147 aa11.25□□□□□ -0.61
PABPC1-205ENST00000518196 EFCAB10A6NFE3 127 aa11.25□□□□□ -0.61
PABPC1-205ENST00000518196 ZNF878C9JN71 531 aa11.25□□□□□ -0.61
PABPC1-205ENST00000518196 ABCD4O14678 606 aa11.25□□□□□ -0.61
PABPC1-205ENST00000518196 FAM20BO75063 409 aa11.25□□□□□ -0.61
PABPC1-205ENST00000518196 APOL3O95236 402 aa11.25□□□□□ -0.61
PABPC1-205ENST00000518196 H2BFMP0C1H6 154 aa11.25□□□□□ -0.61
PABPC1-205ENST00000518196 PSKH1P11801 424 aa11.25□□□□□ -0.61
PABPC1-205ENST00000518196 ALOX5APP20292 161 aa11.25□□□□□ -0.61
PABPC1-205ENST00000518196 CCNOP22674 350 aa11.25□□□□□ -0.61
PABPC1-205ENST00000518196 CXCR4P61073 352 aa11.25□□□□□ -0.61
PABPC1-205ENST00000518196 GRB2P62993 217 aaKnown RBP11.25□□□□□ -0.61
PABPC1-205ENST00000518196 ACTC1P68032 377 aa11.25□□□□□ -0.61
PABPC1-205ENST00000518196 ACTA1P68133 377 aa11.25□□□□□ -0.61
PABPC1-205ENST00000518196 GALK2Q01415 458 aa11.25□□□□□ -0.61
PABPC1-205ENST00000518196 ARL9Q6T311 187 aa11.25□□□□□ -0.61
PABPC1-205ENST00000518196 SLC22A25Q6T423 547 aa11.25□□□□□ -0.61
PABPC1-205ENST00000518196 UNQ6126/PRO20091Q6UXV3 157 aa11.25□□□□□ -0.61
PABPC1-205ENST00000518196 RHOUQ7L0Q8 258 aa11.25□□□□□ -0.61
PABPC1-205ENST00000518196 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.25□□□□□ -0.61
PABPC1-205ENST00000518196 BPIFB6Q8NFQ5 453 aa11.25□□□□□ -0.61
PABPC1-205ENST00000518196 OR10H4Q8NGA5 316 aa11.25□□□□□ -0.61
PABPC1-205ENST00000518196 ST7LQ8TDW4 575 aa11.25□□□□□ -0.61
PABPC1-205ENST00000518196 SMAP2Q8WU79 429 aaPredicted RBP11.25□□□□□ -0.61
PABPC1-205ENST00000518196 IPCEF1Q8WWN9 437 aaPredicted RBP11.25□□□□□ -0.61
PABPC1-205ENST00000518196 SPTSSAQ969W0 71 aa11.25□□□□□ -0.61
PABPC1-205ENST00000518196 MRPL48Q96GC5 212 aaKnown RBP11.25□□□□□ -0.61
PABPC1-205ENST00000518196 POM121L2Q96KW2 1035 aa11.25□□□□□ -0.61
PABPC1-205ENST00000518196 DCLRE1CQ96SD1 692 aaKnown RBP11.25□□□□□ -0.61
PABPC1-205ENST00000518196 TBX5Q99593 518 aa11.25□□□□□ -0.61
PABPC1-205ENST00000518196 COPS4Q9BT78 406 aa11.25□□□□□ -0.61
PABPC1-205ENST00000518196 EIF3KQ9UBQ5 218 aaKnown RBP11.25□□□□□ -0.61
PABPC1-205ENST00000518196 RNF115Q9Y4L5 304 aa11.25□□□□□ -0.61
PABPC1-205ENST00000518196 PKDREJQ9NTG1 2253 aa11.25□□□□□ -0.61
PABPC1-205ENST00000518196 LRRK2Q5S007 2527 aa11.25□□□□□ -0.61
PABPC1-205ENST00000518196 RTTNQ86VV8 2226 aa11.24□□□□□ -0.61
PABPC1-205ENST00000518196 ANKHD1Q8IWZ3 2542 aaKnown RBP11.24□□□□□ -0.61
PABPC1-205ENST00000518196 LOC100509620A0A075B734 347 aa11.24□□□□□ -0.61
PABPC1-205ENST00000518196 DAPL1A0PJW8 107 aa11.24□□□□□ -0.61
PABPC1-205ENST00000518196 APOC1P02654 83 aa11.24□□□□□ -0.61
PABPC1-205ENST00000518196 CCL2P13500 99 aa11.24□□□□□ -0.61
PABPC1-205ENST00000518196 ZNF35P13682 527 aa11.24□□□□□ -0.61
PABPC1-205ENST00000518196 HSD11B1P28845 292 aa11.24□□□□□ -0.61
PABPC1-205ENST00000518196 TPTEP56180 551 aa11.24□□□□□ -0.61
PABPC1-205ENST00000518196 MED21Q13503 144 aa11.24□□□□□ -0.61
PABPC1-205ENST00000518196 DEGS2Q6QHC5 323 aa11.24□□□□□ -0.61
PABPC1-205ENST00000518196 ZNF322Q6U7Q0 402 aaPredicted RBP11.24□□□□□ -0.61
PABPC1-205ENST00000518196 SPATC1Q76KD6 591 aa11.24□□□□□ -0.61
PABPC1-205ENST00000518196 KRT77Q7Z794 578 aa11.24□□□□□ -0.61
PABPC1-205ENST00000518196 MYPOPQ86VE0 399 aaPredicted RBP11.24□□□□□ -0.61
PABPC1-205ENST00000518196 ACBD7Q8N6N7 88 aa11.24□□□□□ -0.61
PABPC1-205ENST00000518196 ZNF540Q8NDQ6 660 aa11.24□□□□□ -0.61
PABPC1-205ENST00000518196 OR52I1Q8NGK6 324 aa11.24□□□□□ -0.61
PABPC1-205ENST00000518196 OR10S1Q8NGN2 331 aa11.24□□□□□ -0.61
PABPC1-205ENST00000518196 RNF133Q8WVZ7 376 aa11.24□□□□□ -0.61
PABPC1-205ENST00000518196 GGHQ92820 318 aa11.24□□□□□ -0.61
PABPC1-205ENST00000518196 KCNJ15Q99712 375 aa11.24□□□□□ -0.61
PABPC1-205ENST00000518196 MROQ9BYG7 248 aa11.24□□□□□ -0.61
PABPC1-205ENST00000518196 LIN7BQ9HAP6 207 aa11.24□□□□□ -0.61
PABPC1-205ENST00000518196 ELOVL3Q9HB03 270 aa11.24□□□□□ -0.61
PABPC1-205ENST00000518196 FGF20Q9NP95 211 aaPredicted RBP11.24□□□□□ -0.61
PABPC1-205ENST00000518196 PNRC2Q9NPJ4 139 aaKnown RBP11.24□□□□□ -0.61
PABPC1-205ENST00000518196 DDX28Q9NUL7 540 aaKnown RBP11.24□□□□□ -0.61
PABPC1-205ENST00000518196 CNOT2Q9NZN8 540 aaKnown RBP11.24□□□□□ -0.61
PABPC1-205ENST00000518196 POU2F3Q9UKI9 436 aa11.24□□□□□ -0.61
PABPC1-205ENST00000518196 IKZF2Q9UKS7 526 aa11.24□□□□□ -0.61
PABPC1-205ENST00000518196 COPS3Q9UNS2 423 aa11.24□□□□□ -0.61
PABPC1-205ENST00000518196 TPRKBQ9Y3C4 175 aa11.24□□□□□ -0.61
PABPC1-205ENST00000518196 GRIP1Q9Y3R0 1128 aa11.24□□□□□ -0.61
PABPC1-205ENST00000518196 ATP23Q9Y6H3 246 aa11.24□□□□□ -0.61
PABPC1-205ENST00000518196 GCN1Q92616 2671 aaKnown RBP11.24□□□□□ -0.61
PABPC1-205ENST00000518196 SPTAN1Q13813 2472 aaKnown RBP11.24□□□□□ -0.61
PABPC1-205ENST00000518196 COL12A1Q99715 3063 aa11.23□□□□□ -0.61
PABPC1-205ENST00000518196 A0A1W2PQL4 384 aaPredicted RBP11.23□□□□□ -0.61
PABPC1-205ENST00000518196 VSTM5A8MXK1 200 aa11.23□□□□□ -0.61
PABPC1-205ENST00000518196 F5H5K5 113 aa11.23□□□□□ -0.61
PABPC1-205ENST00000518196 SLC1A7O00341 560 aa11.23□□□□□ -0.61
PABPC1-205ENST00000518196 XPNPEP2O43895 674 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms