RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 NCR1O76036 304 aa11.03□□□□□ -0.64
COL5A1-206ENST00000465877 LY6G6DO95868 133 aa11.03□□□□□ -0.64
COL5A1-206ENST00000465877 PAICSP22234 425 aaKnown RBP11.03□□□□□ -0.64
COL5A1-206ENST00000465877 DAPP51397 102 aa11.03□□□□□ -0.64
COL5A1-206ENST00000465877 KRTAP1-1Q07627 177 aa11.03□□□□□ -0.64
COL5A1-206ENST00000465877 GINS1Q14691 196 aa11.03□□□□□ -0.64
COL5A1-206ENST00000465877 ACSM5Q6NUN0 579 aa11.03□□□□□ -0.64
COL5A1-206ENST00000465877 HIPK1Q86Z02 1210 aa11.03□□□□□ -0.64
COL5A1-206ENST00000465877 PARP8Q8N3A8 854 aa11.03□□□□□ -0.64
COL5A1-206ENST00000465877 LRTOMTQ8WZ04 291 aa11.03□□□□□ -0.64
COL5A1-206ENST00000465877 GTF3AQ92664 365 aaKnown RBP11.03□□□□□ -0.64
COL5A1-206ENST00000465877 MAP6Q96JE9 813 aa11.03□□□□□ -0.64
COL5A1-206ENST00000465877 DCLRE1CQ96SD1 692 aaKnown RBP11.03□□□□□ -0.64
COL5A1-206ENST00000465877 ATF6BQ99941 703 aa11.03□□□□□ -0.64
COL5A1-206ENST00000465877 CDADC1Q9BWV3 514 aa11.03□□□□□ -0.64
COL5A1-206ENST00000465877 HCAR1Q9BXC0 346 aa11.03□□□□□ -0.64
COL5A1-206ENST00000465877 MED20Q9H944 212 aa11.03□□□□□ -0.64
COL5A1-206ENST00000465877 PNRC2Q9NPJ4 139 aaKnown RBP11.03□□□□□ -0.64
COL5A1-206ENST00000465877 GPR160Q9UJ42 338 aa11.03□□□□□ -0.64
COL5A1-206ENST00000465877 GRIP1Q9Y3R0 1128 aa11.03□□□□□ -0.64
COL5A1-206ENST00000465877 SVEP1Q4LDE5 3571 aa11.03□□□□□ -0.64
COL5A1-206ENST00000465877 LOC390937A0A1W2PQ73 354 aa11.02□□□□□ -0.65
COL5A1-206ENST00000465877 C17orf100A8MU93 164 aa11.02□□□□□ -0.65
COL5A1-206ENST00000465877 G3V2T6 193 aa11.02□□□□□ -0.65
COL5A1-206ENST00000465877 MT-ND5P03915 603 aa11.02□□□□□ -0.65
COL5A1-206ENST00000465877 SPARCP09486 303 aa11.02□□□□□ -0.65
COL5A1-206ENST00000465877 FMO3P31513 532 aa11.02□□□□□ -0.65
COL5A1-206ENST00000465877 ENTPD1P49961 510 aa11.02□□□□□ -0.65
COL5A1-206ENST00000465877 ACTR3P61158 418 aa11.02□□□□□ -0.65
COL5A1-206ENST00000465877 CDK5Q00535 292 aa11.02□□□□□ -0.65
COL5A1-206ENST00000465877 KPNB1Q14974 876 aaKnown RBP11.02□□□□□ -0.65
COL5A1-206ENST00000465877 LINC01590Q5TEZ4 76 aa11.02□□□□□ -0.65
COL5A1-206ENST00000465877 TMEM154Q6P9G4 183 aa11.02□□□□□ -0.65
COL5A1-206ENST00000465877 Q71RC1 249 aaPredicted RBP11.02□□□□□ -0.65
COL5A1-206ENST00000465877 AMIGO2Q86SJ2 522 aa11.02□□□□□ -0.65
COL5A1-206ENST00000465877 PYDC1Q8WXC3 89 aa11.02□□□□□ -0.65
COL5A1-206ENST00000465877 OTULINQ96BN8 352 aa11.02□□□□□ -0.65
COL5A1-206ENST00000465877 PITX2Q99697 317 aa11.02□□□□□ -0.65
COL5A1-206ENST00000465877 BPESC1Q9GZL8 116 aa11.02□□□□□ -0.65
COL5A1-206ENST00000465877 WDR76Q9H967 626 aa11.02□□□□□ -0.65
COL5A1-206ENST00000465877 HINT3Q9NQE9 182 aaKnown RBP11.02□□□□□ -0.65
COL5A1-206ENST00000465877 KRT84Q9NSB2 600 aa11.02□□□□□ -0.65
COL5A1-206ENST00000465877 CGGBP1Q9UFW8 167 aaPredicted RBP11.02□□□□□ -0.65
COL5A1-206ENST00000465877 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.02□□□□□ -0.65
COL5A1-206ENST00000465877 FN1P02751 2386 aaKnown RBP11.01□□□□□ -0.65
COL5A1-206ENST00000465877 PLSCR5A0PG75 271 aa11.01□□□□□ -0.65
COL5A1-206ENST00000465877 ZSCAN5BA6NJL1 495 aa11.01□□□□□ -0.65
COL5A1-206ENST00000465877 VWC2LB2RUY7 222 aa11.01□□□□□ -0.65
COL5A1-206ENST00000465877 PRR23D1E9PI22 279 aaPredicted RBP11.01□□□□□ -0.65
COL5A1-206ENST00000465877 TIMM8AO60220 97 aaPredicted RBP11.01□□□□□ -0.65
COL5A1-206ENST00000465877 HPXP02790 462 aa11.01□□□□□ -0.65
COL5A1-206ENST00000465877 HMGN1P05114 100 aa11.01□□□□□ -0.65
COL5A1-206ENST00000465877 PRR23D2P0DMB1 279 aaPredicted RBP11.01□□□□□ -0.65
COL5A1-206ENST00000465877 NR4A2P43354 598 aa11.01□□□□□ -0.65
COL5A1-206ENST00000465877 MAGEB1P43366 347 aa11.01□□□□□ -0.65
COL5A1-206ENST00000465877 RGS6P49758 472 aa11.01□□□□□ -0.65
COL5A1-206ENST00000465877 MMP15P51511 669 aa11.01□□□□□ -0.65
COL5A1-206ENST00000465877 BLVRAP53004 296 aa11.01□□□□□ -0.65
COL5A1-206ENST00000465877 LOXL1Q08397 574 aaPredicted RBP11.01□□□□□ -0.65
COL5A1-206ENST00000465877 ECH1Q13011 328 aa11.01□□□□□ -0.65
COL5A1-206ENST00000465877 MOGQ16653 247 aa11.01□□□□□ -0.65
COL5A1-206ENST00000465877 PCGF3Q3KNV8 242 aa11.01□□□□□ -0.65
COL5A1-206ENST00000465877 KRTAP27-1Q3LI81 207 aa11.01□□□□□ -0.65
COL5A1-206ENST00000465877 TMEM236Q5W0B7 351 aa11.01□□□□□ -0.65
COL5A1-206ENST00000465877 PLBD1Q6P4A8 553 aa11.01□□□□□ -0.65
COL5A1-206ENST00000465877 DCXRQ7Z4W1 244 aa11.01□□□□□ -0.65
COL5A1-206ENST00000465877 ZDHHC13Q8IUH4 622 aa11.01□□□□□ -0.65
COL5A1-206ENST00000465877 ZNF786Q8N393 782 aa11.01□□□□□ -0.65
COL5A1-206ENST00000465877 ZNF511Q8NB15 262 aa11.01□□□□□ -0.65
COL5A1-206ENST00000465877 OR10S1Q8NGN2 331 aa11.01□□□□□ -0.65
COL5A1-206ENST00000465877 UBASH3BQ8TF42 649 aa11.01□□□□□ -0.65
COL5A1-206ENST00000465877 APOBEC3DQ96AK3 386 aaPredicted RBP11.01□□□□□ -0.65
COL5A1-206ENST00000465877 COG8Q96MW5 612 aa11.01□□□□□ -0.65
COL5A1-206ENST00000465877 TEX12Q9BXU0 123 aa11.01□□□□□ -0.65
COL5A1-206ENST00000465877 SEMA6AQ9H2E6 1030 aa11.01□□□□□ -0.65
COL5A1-206ENST00000465877 DDX28Q9NUL7 540 aaKnown RBP11.01□□□□□ -0.65
COL5A1-206ENST00000465877 OAZ3Q9UMX2 235 aa11.01□□□□□ -0.65
COL5A1-206ENST00000465877 ABCA1O95477 2261 aa11.01□□□□□ -0.65
COL5A1-206ENST00000465877 CSPG4Q6UVK1 2322 aa11.01□□□□□ -0.65
COL5A1-206ENST00000465877 ZNF878C9JN71 531 aa11□□□□□ -0.65
COL5A1-206ENST00000465877 LYNX1G3V0Z9 82 aa11□□□□□ -0.65
COL5A1-206ENST00000465877 M0R135 149 aa11□□□□□ -0.65
COL5A1-206ENST00000465877 PRODHO43272 600 aa11□□□□□ -0.65
COL5A1-206ENST00000465877 GLCEO94923 617 aa11□□□□□ -0.65
COL5A1-206ENST00000465877 ACSM4P0C7M7 580 aa11□□□□□ -0.65
COL5A1-206ENST00000465877 LYNX1P0DP58 116 aa11□□□□□ -0.65
COL5A1-206ENST00000465877 ACHEP22303 614 aa11□□□□□ -0.65
COL5A1-206ENST00000465877 TUBG1P23258 451 aa11□□□□□ -0.65
COL5A1-206ENST00000465877 IGFBP5P24593 272 aa11□□□□□ -0.65
COL5A1-206ENST00000465877 GIFP27352 417 aa11□□□□□ -0.65
COL5A1-206ENST00000465877 ZNF81P51508 661 aa11□□□□□ -0.65
COL5A1-206ENST00000465877 CRISP1P54107 249 aa11□□□□□ -0.65
COL5A1-206ENST00000465877 ESRRGP62508 458 aa11□□□□□ -0.65
COL5A1-206ENST00000465877 PSG7Q13046 419 aa11□□□□□ -0.65
COL5A1-206ENST00000465877 GGTLC2Q14390 218 aa11□□□□□ -0.65
COL5A1-206ENST00000465877 PCK2Q16822 640 aa11□□□□□ -0.65
COL5A1-206ENST00000465877 ZMAT1Q5H9K5 638 aa11□□□□□ -0.65
COL5A1-206ENST00000465877 KDM4DQ6B0I6 523 aa11□□□□□ -0.65
COL5A1-206ENST00000465877 ERI1Q8IV48 349 aaKnown RBP11□□□□□ -0.65
COL5A1-206ENST00000465877 OR6N2Q8NGY6 317 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms