RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 TBC1D23Q9NUY8 699 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 ASH2LQ9UBL3 628 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 POLR1DQ9Y2S0 133 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 V9GYQ6 96 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 CR1P17927 2039 aa5.47□□□□□ -1.53
USP54-202ENST00000413442 PPIAL4EA0A075B759 164 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 IGHV4-30-2A0A087WSY4 118 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 A0A096LNT2 108 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 PPIAL4CA0A0B4J2A2 164 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 IGHV1-69-2A0A0G2JMI3 117 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 A0A1B0GWJ7 208 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 B4DSR2 109 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 PRR23D1E9PI22 279 aaPredicted RBP5.46□□□□□ -1.54
USP54-202ENST00000413442 PPIAL4DF5H284 164 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 H3BN98 237 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 EBAG9O00559 213 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 SMAD7O15105 426 aaKnown RBP5.46□□□□□ -1.54
USP54-202ENST00000413442 GPRIN2O60269 458 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 GMDSO60547 372 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 FKBP6O75344 327 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 ZNF254O75437 659 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 GLCEO94923 617 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 PRR23D2P0DMB1 279 aaPredicted RBP5.46□□□□□ -1.54
USP54-202ENST00000413442 PPIAL4FP0DN26 164 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 GAAP10253 952 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 FUT4P22083 530 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 OTX1P32242 354 aaPredicted RBP5.46□□□□□ -1.54
USP54-202ENST00000413442 DCTDP32321 178 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 GGT2P36268 569 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 GPR6P46095 362 aaPredicted RBP5.46□□□□□ -1.54
USP54-202ENST00000413442 ENTPD1P49961 510 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 DVL1P1P54792 670 aaPredicted RBP5.46□□□□□ -1.54
USP54-202ENST00000413442 GRB2P62993 217 aaKnown RBP5.46□□□□□ -1.54
USP54-202ENST00000413442 TMED1Q13445 227 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 ZNF181Q2M3W8 571 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 KRTAP27-1Q3LI81 207 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 CHRFAM7AQ494W8 412 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 CCDC92Q53HC0 331 aaPredicted RBP5.46□□□□□ -1.54
USP54-202ENST00000413442 FAM166AQ6J272 317 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 SLC18B1Q6NT16 456 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 ZFP1Q6P2D0 407 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 ZDHHC13Q8IUH4 622 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 FTMTQ8N4E7 242 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 LINC01356Q8N9X3 169 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 SLC37A3Q8NCC5 494 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 PROKR2Q8NFJ6 384 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 OR8G5Q8NG78 346 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 OR52H1Q8NGJ2 320 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 ABHD4Q8TB40 342 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 SLC25A40Q8TBP6 338 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 RAB39BQ96DA2 213 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 POM121Q96HA1 1249 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 PLEKHA8Q96JA3 519 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 ZNF582Q96NG8 517 aaPredicted RBP5.46□□□□□ -1.54
USP54-202ENST00000413442 PITX2Q99697 317 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 SYT3Q9BQG1 590 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 CADM1Q9BY67 442 aaKnown RBP5.46□□□□□ -1.54
USP54-202ENST00000413442 OR2J1Q9GZK6 312 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 GSX1Q9H4S2 264 aaPredicted RBP5.46□□□□□ -1.54
USP54-202ENST00000413442 RGCCQ9H4X1 137 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 RERGLQ9H628 205 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 SAP30LQ9HAJ7 183 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 SLC25A19Q9HC21 320 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 ABCB9Q9NP78 766 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 TRIM36Q9NQ86 728 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 RPRD1BQ9NQG5 326 aaKnown RBP5.46□□□□□ -1.54
USP54-202ENST00000413442 DDX28Q9NUL7 540 aaKnown RBP5.46□□□□□ -1.54
USP54-202ENST00000413442 PDP1Q9P0J1 537 aaPredicted RBP5.46□□□□□ -1.54
USP54-202ENST00000413442 PURGQ9UJV8 347 aaKnown RBP5.46□□□□□ -1.54
USP54-202ENST00000413442 KCNS2Q9ULS6 477 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 GRIP1Q9Y3R0 1128 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 AP4S1Q9Y587 144 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 LHFPL6Q9Y693 200 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 TMEM14AQ9Y6G1 99 aa5.46□□□□□ -1.54
USP54-202ENST00000413442 A0A0A6YYJ9 748 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 TRAV20A0A0B4J274 112 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 IQCF6A8MYZ5 107 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 CLDN25C9JDP6 229 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 ZNF878C9JN71 531 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 G3V2T6 193 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 ZNF593O00488 134 aaPredicted RBP5.45□□□□□ -1.54
USP54-202ENST00000413442 RER1O15258 196 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 TPD52L2O43399 206 aaKnown RBP5.45□□□□□ -1.54
USP54-202ENST00000413442 XRCC2O43543 280 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 NDUFA2O43678 99 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 TIMM8AO60220 97 aaPredicted RBP5.45□□□□□ -1.54
USP54-202ENST00000413442 LMX1BO60663 402 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 LILRA1O75019 489 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 CIB2O75838 187 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 CLPTM1O96005 669 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 NGFP01138 241 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 SCG5P05408 212 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 IGFBP1P08833 259 aaPredicted RBP5.45□□□□□ -1.54
USP54-202ENST00000413442 RPSAP08865 295 aaKnown RBP5.45□□□□□ -1.54
USP54-202ENST00000413442 CCL2P13500 99 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 ATP6V1B1P15313 513 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 HOXB4P17483 251 aaPredicted RBP5.45□□□□□ -1.54
USP54-202ENST00000413442 WNT5AP41221 380 aa5.45□□□□□ -1.54
USP54-202ENST00000413442 SRP9P49458 86 aaKnown RBP5.45□□□□□ -1.54
USP54-202ENST00000413442 CRISP1P54107 249 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms