RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 UBQLN3Q9H347 655 aa4.24□□□□□ -1.73
KARSP3-201ENST00000571212 GORASP2Q9H8Y8 452 aa4.24□□□□□ -1.73
KARSP3-201ENST00000571212 MTHFD2LQ9H903 347 aaPredicted RBP4.24□□□□□ -1.73
KARSP3-201ENST00000571212 CRLF2Q9HC73 371 aa4.24□□□□□ -1.73
KARSP3-201ENST00000571212 Q9N2J8 555 aa4.24□□□□□ -1.73
KARSP3-201ENST00000571212 ZC4H2Q9NQZ6 224 aa4.24□□□□□ -1.73
KARSP3-201ENST00000571212 NPAP1Q9NZP6 1156 aa4.24□□□□□ -1.73
KARSP3-201ENST00000571212 CNIH4Q9P003 139 aa4.24□□□□□ -1.73
KARSP3-201ENST00000571212 ACTR3BQ9P1U1 418 aa4.24□□□□□ -1.73
KARSP3-201ENST00000571212 SPRR3Q9UBC9 169 aa4.24□□□□□ -1.73
KARSP3-201ENST00000571212 CYB5R1Q9UHQ9 305 aa4.24□□□□□ -1.73
KARSP3-201ENST00000571212 PRPF19Q9UMS4 504 aaKnown RBP4.24□□□□□ -1.73
KARSP3-201ENST00000571212 BOKQ9UMX3 212 aaPredicted RBP4.24□□□□□ -1.73
KARSP3-201ENST00000571212 ABCG2Q9UNQ0 655 aa4.24□□□□□ -1.73
KARSP3-201ENST00000571212 POMPQ9Y244 141 aa4.24□□□□□ -1.73
KARSP3-201ENST00000571212 CAB39Q9Y376 341 aaPredicted RBP4.24□□□□□ -1.73
KARSP3-201ENST00000571212 MRPS18CQ9Y3D5 142 aaKnown RBP4.24□□□□□ -1.73
KARSP3-201ENST00000571212 EXPH5Q8NEV8 1989 aa4.24□□□□□ -1.73
KARSP3-201ENST00000571212 A0A087X0M5 115 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 A0A0G2JPF8 293 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 A0A1B0GX30 115 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 LOC390937A0A1W2PQ73 354 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 NPIPB13A6NJU9 1138 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 NPIPB5A8MRT5 1133 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 FAM220BPB1ANY3 271 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 HNRNPCL3B7ZW38 293 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 NPIPB4C9JG80 1138 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 F8W036 122 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 FAAHO00519 579 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 ARHGEF9O43307 516 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 SPRY3O43610 288 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 STX11O75558 287 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 MFN2O95140 757 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 CPSF4O95639 269 aaKnown RBP4.23□□□□□ -1.73
KARSP3-201ENST00000571212 BCL10O95999 233 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 HSMCR30P0CW71 290 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 HNRNPCL4P0DMR1 293 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 OR12D1P0DN82 309 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 CCNA2P20248 432 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 GABRA3P34903 492 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 PCGF2P35227 344 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 CASP3P42574 277 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 ATP12AP54707 1039 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 PSMD4P55036 377 aaKnown RBP4.23□□□□□ -1.73
KARSP3-201ENST00000571212 PSME3P61289 254 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 KRR1Q13601 381 aaKnown RBP4.23□□□□□ -1.73
KARSP3-201ENST00000571212 EFR3AQ14156 821 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 ZNHIT3Q15649 155 aaPredicted RBP4.23□□□□□ -1.73
KARSP3-201ENST00000571212 MAPK14Q16539 360 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 SYPL1Q16563 259 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 DECR1Q16698 335 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 TMEM44Q2T9K0 475 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 ACSF3Q4G176 576 aaPredicted RBP4.23□□□□□ -1.73
KARSP3-201ENST00000571212 IQCCQ4KMZ1 466 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 DCST2Q5T1A1 773 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.23□□□□□ -1.73
KARSP3-201ENST00000571212 KRT80Q6KB66 452 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 Q6ZSV7 163 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 UTS2BQ765I0 119 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 RNF144BQ7Z419 303 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 SLC30A8Q8IWU4 369 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 PACRGLQ8N7B6 248 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 FADS6Q8N9I5 356 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 WDSUB1Q8N9V3 476 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 ZNF540Q8NDQ6 660 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 OR10G3Q8NGC4 313 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 OR5H6Q8NGV6 325 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 OR52N1Q8NH53 320 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 LRRC20Q8TCA0 184 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 PIK3R3Q92569 461 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 CDS1Q92903 461 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 TMBIM1Q969X1 311 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 SLC35G5Q96KT7 338 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 COL21A1Q96P44 957 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 NODALQ96S42 347 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 BCL7BQ9BQE9 202 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 ANKRD60Q9BZ19 345 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 EXOSC3Q9NQT5 275 aaKnown RBP4.23□□□□□ -1.73
KARSP3-201ENST00000571212 UBQLN4Q9NRR5 601 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 EXD2Q9NVH0 621 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 EIF3KQ9UBQ5 218 aaKnown RBP4.23□□□□□ -1.73
KARSP3-201ENST00000571212 AASSQ9UDR5 926 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 RIMS3Q9UJD0 308 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 SPATA2Q9UM82 520 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 CHTOPQ9Y3Y2 248 aaKnown RBP4.23□□□□□ -1.73
KARSP3-201ENST00000571212 UGT2A1Q9Y4X1 527 aa4.23□□□□□ -1.73
KARSP3-201ENST00000571212 CHD3Q12873 2000 aaKnown RBP4.23□□□□□ -1.73
KARSP3-201ENST00000571212 ATRQ13535 2644 aa4.22□□□□□ -1.73
KARSP3-201ENST00000571212 TRBV5-7A0A0A0MS05 114 aa4.22□□□□□ -1.73
KARSP3-201ENST00000571212 AIM2O14862 343 aa4.22□□□□□ -1.73
KARSP3-201ENST00000571212 LY6G6DO95868 133 aa4.22□□□□□ -1.73
KARSP3-201ENST00000571212 SEMG1P04279 462 aa4.22□□□□□ -1.73
KARSP3-201ENST00000571212 CYP4B1P13584 511 aa4.22□□□□□ -1.73
KARSP3-201ENST00000571212 ZNF26P17031 533 aaPredicted RBP4.22□□□□□ -1.73
KARSP3-201ENST00000571212 TMEM11P17152 192 aa4.22□□□□□ -1.73
KARSP3-201ENST00000571212 HOXD3P31249 432 aaPredicted RBP4.22□□□□□ -1.73
KARSP3-201ENST00000571212 OPRM1P35372 400 aa4.22□□□□□ -1.73
KARSP3-201ENST00000571212 CHI3L1P36222 383 aaPredicted RBP4.22□□□□□ -1.73
KARSP3-201ENST00000571212 UGT2B10P36537 528 aa4.22□□□□□ -1.73
KARSP3-201ENST00000571212 GSK3BP49841 420 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms