RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 ABCA4P78363 2273 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 C5orf49A4QMS7 147 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 SNTNA6NMZ2 147 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 A6NNC1 897 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 DEFB108AA8MXU0 73 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 ATP6V1G2-DDX39BF2Z307 99 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 MAGEB4O15481 346 aaPredicted RBP11.48□□□□□ -0.57
HDAC1-208ENST00000482310 XPNPEP2O43895 674 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 IGKV3-15P01624 115 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 CD3EP07766 207 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 LYNP07948 512 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 DBHP09172 617 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 SBK2P0C263 348 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 MYF6P23409 242 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 STOMP27105 288 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 CALCRP30988 508 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 GGTLC2Q14390 218 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 RAB35Q15286 201 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 TBC1D28Q2M2D7 210 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 BEX5Q5H9J7 111 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 ELFN2Q5R3F8 820 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 KRT80Q6KB66 452 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 VHLLQ6RSH7 139 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 SLC22A25Q6T423 547 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 DPPA2Q7Z7J5 298 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 TMEM200AQ86VY9 491 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 CDC20BQ86Y33 519 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 ALDH16A1Q8IZ83 802 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 PAQR4Q8N4S7 273 aaPredicted RBP11.48□□□□□ -0.57
HDAC1-208ENST00000482310 BPIFB6Q8NFQ5 453 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 OR10S1Q8NGN2 331 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 NEUROG1Q92886 237 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 LGALS12Q96DT0 336 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 SLAMF6Q96DU3 332 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 ZNF75AQ96N20 296 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 COPS4Q9BT78 406 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 ABHD6Q9BV23 337 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 ANKRD60Q9BZ19 345 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 RASSF4Q9H2L5 321 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 C1orf198Q9H425 327 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 POU2F3Q9UKI9 436 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 N6AMT1Q9Y5N5 214 aa11.48□□□□□ -0.57
HDAC1-208ENST00000482310 PLCE1Q9P212 2302 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 LOC100509620A0A075B734 347 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 IGHV2OR16-5A0A0B4J2B6 119 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 F5H5K5 113 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 SYNGR3O43761 229 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 IGLV1-44P01699 117 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 SERPINA5P05154 406 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 FAM157BP0CG42 384 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 GDI2P50395 445 aaKnown RBP11.47□□□□□ -0.57
HDAC1-208ENST00000482310 CXCR4P61073 352 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 NAAAQ02083 359 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 POU4F2Q12837 409 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 SLC25A30Q5SVS4 291 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 NCMAPQ5T1S8 102 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 LAIR2Q6ISS4 152 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 LRRN1Q6UXK5 716 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 AHSA2Q719I0 299 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 SSX6Q7RTT6 188 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 SYT9Q86SS6 491 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 ACBD4Q8NC06 268 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 OR1F12Q8NHA8 337 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 OTOSQ8NHW6 89 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 ST7LQ8TDW4 575 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 MARVELD3Q96A59 401 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 ATF6BQ99941 703 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 Q9H521 79 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 PNRC2Q9NPJ4 139 aaKnown RBP11.47□□□□□ -0.57
HDAC1-208ENST00000482310 CRNNQ9UBG3 495 aaPredicted RBP11.47□□□□□ -0.57
HDAC1-208ENST00000482310 KCNN3Q9UGI6 736 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 IKZF2Q9UKS7 526 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 GRIP1Q9Y3R0 1128 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 RPL36Q9Y3U8 105 aaKnown RBP11.47□□□□□ -0.57
HDAC1-208ENST00000482310 ATP23Q9Y6H3 246 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 HSPE1-MOB4S4R3N1 261 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 CENPEQ02224 2701 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 ROS1P08922 2347 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 DSCAMO60469 2012 aa11.47□□□□□ -0.57
HDAC1-208ENST00000482310 PRR32B1ATL7 298 aa11.46□□□□□ -0.57
HDAC1-208ENST00000482310 ZNF670-ZNF695F2Z2N8 137 aa11.46□□□□□ -0.57
HDAC1-208ENST00000482310 PTHP01270 115 aa11.46□□□□□ -0.57
HDAC1-208ENST00000482310 CRYAAP02489 173 aa11.46□□□□□ -0.57
HDAC1-208ENST00000482310 PTAFRP25105 342 aa11.46□□□□□ -0.57
HDAC1-208ENST00000482310 HSD11B1P28845 292 aa11.46□□□□□ -0.57
HDAC1-208ENST00000482310 SLC6A9P48067 706 aa11.46□□□□□ -0.57
HDAC1-208ENST00000482310 PRKXP51817 358 aa11.46□□□□□ -0.57
HDAC1-208ENST00000482310 HIST1H3AP68431 136 aa11.46□□□□□ -0.57
HDAC1-208ENST00000482310 TEX30Q5JUR7 227 aa11.46□□□□□ -0.57
HDAC1-208ENST00000482310 HIST2H3PS2Q5TEC6 136 aa11.46□□□□□ -0.57
HDAC1-208ENST00000482310 PLEKHG7Q6ZR37 379 aa11.46□□□□□ -0.57
HDAC1-208ENST00000482310 HIST2H3AQ71DI3 136 aa11.46□□□□□ -0.57
HDAC1-208ENST00000482310 KRT77Q7Z794 578 aa11.46□□□□□ -0.57
HDAC1-208ENST00000482310 ZNF786Q8N393 782 aa11.46□□□□□ -0.57
HDAC1-208ENST00000482310 OR52I1Q8NGK6 324 aa11.46□□□□□ -0.57
HDAC1-208ENST00000482310 YIPF3Q9GZM5 350 aa11.46□□□□□ -0.57
HDAC1-208ENST00000482310 HDHD2Q9H0R4 259 aa11.46□□□□□ -0.57
HDAC1-208ENST00000482310 SLC24A3Q9HC58 644 aa11.46□□□□□ -0.57
HDAC1-208ENST00000482310 BRD7Q9NPI1 651 aa11.46□□□□□ -0.57
HDAC1-208ENST00000482310 HAO2Q9NYQ3 351 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms