RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 PTTG1O95997 202 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 HPRP00739 348 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 RPS17P08708 135 aaKnown RBP3.15□□□□□ -1.9
CNGA1-203ENST00000420489 RBP1P09455 135 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 SBK3P0C264 359 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 SLC35G4P0C7Q5 338 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 CDH1P12830 882 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 CCL2P13500 99 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 IL7RP16871 459 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 SLC6A2P23975 617 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 CNTFRP26992 372 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 IL12AP29459 219 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 DEFA1P59665 94 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 DEFA3P59666 94 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 AQP6Q13520 282 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 CSHL1Q14406 222 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 EFNB3Q15768 340 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 HIST2H2ACQ16777 129 aaPredicted RBP3.15□□□□□ -1.9
CNGA1-203ENST00000420489 IMPG1Q17R60 797 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 ZNF750Q32MQ0 723 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 ALKBH6Q3KRA9 238 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 COQ5Q5HYK3 327 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 SPANXN2Q5MJ10 180 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 PRAMEF8Q5VWM4 474 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 CARD17Q5XLA6 110 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 UNQ9370/PRO34162Q6UXP9 181 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 ZNF551Q7Z340 670 aaPredicted RBP3.15□□□□□ -1.9
CNGA1-203ENST00000420489 CATSPERDQ86XM0 798 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 SNX29P2Q8IUI4 249 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 SPATA6LQ8N4H0 392 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 TRAM1L1Q8N609 369 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 TMEM116Q8NCL8 245 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 OR13J1Q8NGT2 312 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 HMGCLL1Q8TB92 370 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 FAM110BQ8TC76 370 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 LRRC20Q8TCA0 184 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 RAB1CQ92928 201 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 MRGPRFQ96AM1 343 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 AURKBQ96GD4 344 aaPredicted RBP3.15□□□□□ -1.9
CNGA1-203ENST00000420489 WDYHV1Q96HA8 205 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 ZNF48Q96MX3 618 aaPredicted RBP3.15□□□□□ -1.9
CNGA1-203ENST00000420489 VPS35Q96QK1 796 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 LYSMD1Q96S90 227 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 VRK1Q99986 396 aaPredicted RBP3.15□□□□□ -1.9
CNGA1-203ENST00000420489 TM2D3Q9BRN9 247 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 ALKBH7Q9BT30 221 aaPredicted RBP3.15□□□□□ -1.9
CNGA1-203ENST00000420489 HOXD1Q9GZZ0 328 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 MED20Q9H944 212 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 CHRAC1Q9NRG0 131 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 ABCB10Q9NRK6 738 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 ZCCHC3Q9NUD5 404 aaKnown RBP3.15□□□□□ -1.9
CNGA1-203ENST00000420489 ORC6Q9Y5N6 252 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 V9GYQ6 96 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 SVEP1Q4LDE5 3571 aa3.15□□□□□ -1.9
CNGA1-203ENST00000420489 A8MT66 165 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 H0YIG0 161 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 EEF2KO00418 725 aaKnown RBP3.15□□□□□ -1.91
CNGA1-203ENST00000420489 GNGT2O14610 69 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 PSMD3O43242 534 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 ZNF264O43296 627 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 SERPINI2O75830 405 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 UPK1BO75841 260 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 CCNKO75909 580 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 AHSA1O95433 338 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 MT-ND1P03886 318 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 ALPLP05186 524 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 CHRM2P08172 466 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 RAB4AP20338 218 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 RFC3P40938 356 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 GSK3BP49841 420 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 NKX2-5P52952 324 aaPredicted RBP3.15□□□□□ -1.91
CNGA1-203ENST00000420489 EEFSECP57772 596 aaKnown RBP3.15□□□□□ -1.91
CNGA1-203ENST00000420489 CTXN1P60606 82 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 FOXI1Q12951 378 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 SLC13A2Q13183 592 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 NPTX1Q15818 432 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 ZIC1Q15915 447 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 CTF1Q16619 201 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 ZNF181Q2M3W8 571 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 TBRG1Q3YBR2 411 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 GTDC1Q4AE62 458 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 C6orf141Q5SZD1 244 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 ZNF620Q6ZNG0 422 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 SLC16A12Q6ZSM3 486 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 VRK2Q86Y07 508 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 CLIP4Q8N3C7 705 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 CCDC185Q8N715 623 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 OR4K14Q8NGD5 310 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 OR6Q1Q8NGQ2 317 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 RASSF5Q8WWW0 418 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 SLC25A36Q96CQ1 311 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 RAB39BQ96DA2 213 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 STARD4Q96DR4 205 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 ZNF583Q96ND8 569 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 VAT1Q99536 393 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 APOL2Q9BQE5 337 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 SLC39A8Q9C0K1 460 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 OR51B5Q9H339 312 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 DSN1Q9H410 356 aa3.15□□□□□ -1.91
CNGA1-203ENST00000420489 GPN1Q9HCN4 374 aaPredicted RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms