RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 CST11Q9H112 138 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 PTGES2Q9H7Z7 377 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 LANCL2Q9NS86 450 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 PHF3Q92576 2039 aaKnown RBP17.79■□□□□ 0.44
CRLF3-201ENST00000324238 C13orf42A0A1B0GVH6 325 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 RORAP35398 523 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 PPP1R1AQ13522 171 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 TFAP2EQ6VUC0 442 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 C9orf40Q8IXQ3 194 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 TMEM185AQ8NFB2 350 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 LIPHQ8WWY8 451 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 FGGYQ96C11 551 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 LRRC46Q96FV0 321 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 DPYSL5Q9BPU6 564 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 PRMT8Q9NR22 394 aaPredicted RBP17.79■□□□□ 0.44
CRLF3-201ENST00000324238 TMED7-TICAM2A0A0A6YYA0 188 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 IGLV1-36A0A0B4J1U3 117 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 SHISA7A6NL88 538 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 ZNF735P0CB33 412 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 OR1D5P58170 312 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 NSDHLQ15738 373 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 TMEM88Q6PEY1 159 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 ADAD2Q8NCV1 583 aaKnown RBP17.79■□□□□ 0.44
CRLF3-201ENST00000324238 BPIFCQ8NFQ6 507 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 OR2I1PQ8NGU4 316 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 OR6K3Q8NGY3 331 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 ARL5BQ96KC2 179 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 TRAV36DV7A0A075B6V5 113 aa17.78■□□□□ 0.44
CRLF3-201ENST00000324238 FAM221BA6H8Z2 402 aa17.78■□□□□ 0.44
CRLF3-201ENST00000324238 TUBAL3A6NHL2 446 aa17.78■□□□□ 0.44
CRLF3-201ENST00000324238 CD2P06729 351 aa17.78■□□□□ 0.44
CRLF3-201ENST00000324238 GP1BBP13224 206 aa17.78■□□□□ 0.44
CRLF3-201ENST00000324238 CAPZBP47756 277 aa17.78■□□□□ 0.44
CRLF3-201ENST00000324238 ARL4DP49703 201 aa17.78■□□□□ 0.44
CRLF3-201ENST00000324238 PLCXD2Q0VAA5 305 aa17.78■□□□□ 0.44
CRLF3-201ENST00000324238 FAM166AQ6J272 317 aa17.78■□□□□ 0.44
CRLF3-201ENST00000324238 MAMDC2Q7Z304 686 aaPredicted RBP17.78■□□□□ 0.44
CRLF3-201ENST00000324238 ZBTB8AQ96BR9 441 aa17.78■□□□□ 0.44
CRLF3-201ENST00000324238 POTEKPQ9BYX7 375 aa17.78■□□□□ 0.44
CRLF3-201ENST00000324238 PDE7BQ9NP56 450 aa17.78■□□□□ 0.44
CRLF3-201ENST00000324238 HRH3Q9Y5N1 445 aa17.78■□□□□ 0.44
CRLF3-201ENST00000324238 TRIOBPQ9H2D6 2365 aa17.78■□□□□ 0.44
CRLF3-201ENST00000324238 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.78■□□□□ 0.44
CRLF3-201ENST00000324238 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.78■□□□□ 0.44
CRLF3-201ENST00000324238 A0A1W2PPC4 97 aa17.78■□□□□ 0.44
CRLF3-201ENST00000324238 GNB3P16520 340 aa17.78■□□□□ 0.44
CRLF3-201ENST00000324238 ACTBP60709 375 aa17.78■□□□□ 0.44
CRLF3-201ENST00000324238 ACTG1P63261 375 aa17.78■□□□□ 0.44
CRLF3-201ENST00000324238 HLA-DQA1Q5Y7H0 255 aa17.78■□□□□ 0.44
CRLF3-201ENST00000324238 TMPPEQ6ZT21 453 aa17.78■□□□□ 0.44
CRLF3-201ENST00000324238 LANCL3Q6ZV70 420 aa17.78■□□□□ 0.44
CRLF3-201ENST00000324238 FJX1Q86VR8 437 aa17.78■□□□□ 0.44
CRLF3-201ENST00000324238 ADIPOR1Q96A54 375 aa17.78■□□□□ 0.44
CRLF3-201ENST00000324238 TCTN2Q96GX1 697 aa17.78■□□□□ 0.44
CRLF3-201ENST00000324238 ARPC5LQ9BPX5 153 aa17.78■□□□□ 0.44
CRLF3-201ENST00000324238 SOX7Q9BT81 388 aa17.78■□□□□ 0.44
CRLF3-201ENST00000324238 CA14Q9ULX7 337 aa17.78■□□□□ 0.44
CRLF3-201ENST00000324238 VDAC3Q9Y277 283 aa17.78■□□□□ 0.44
CRLF3-201ENST00000324238 TMEM269A0A1B0GVZ9 245 aa17.77■□□□□ 0.44
CRLF3-201ENST00000324238 DDAH2O95865 285 aa17.77■□□□□ 0.44
CRLF3-201ENST00000324238 SLC2A1P11166 492 aa17.77■□□□□ 0.44
CRLF3-201ENST00000324238 RPA2P15927 270 aa17.77■□□□□ 0.44
CRLF3-201ENST00000324238 PI3P19957 117 aa17.77■□□□□ 0.44
CRLF3-201ENST00000324238 EMC4Q5J8M3 183 aa17.77■□□□□ 0.44
CRLF3-201ENST00000324238 ROBO4Q8WZ75 1007 aa17.77■□□□□ 0.44
CRLF3-201ENST00000324238 CNTD2Q9H8S5 307 aa17.77■□□□□ 0.44
CRLF3-201ENST00000324238 SLC5A6Q9Y289 635 aa17.77■□□□□ 0.44
CRLF3-201ENST00000324238 PMS2P2O95744 297 aa17.77■□□□□ 0.44
CRLF3-201ENST00000324238 CSNK1EP49674 416 aaKnown RBP17.77■□□□□ 0.44
CRLF3-201ENST00000324238 C1orf140Q5VVS0 124 aa17.77■□□□□ 0.44
CRLF3-201ENST00000324238 TRAPPC6BQ86SZ2 158 aa17.77■□□□□ 0.44
CRLF3-201ENST00000324238 CATSPERDQ86XM0 798 aa17.77■□□□□ 0.44
CRLF3-201ENST00000324238 NAXDQ8IW45 347 aa17.77■□□□□ 0.44
CRLF3-201ENST00000324238 OR52N4Q8NGI2 321 aa17.77■□□□□ 0.44
CRLF3-201ENST00000324238 ZNF721Q8TF20 911 aa17.77■□□□□ 0.44
CRLF3-201ENST00000324238 DLSTP36957 453 aa17.76■□□□□ 0.43
CRLF3-201ENST00000324238 TEX30Q5JUR7 227 aa17.76■□□□□ 0.43
CRLF3-201ENST00000324238 JMJD6Q6NYC1 403 aaPredicted RBP17.76■□□□□ 0.43
CRLF3-201ENST00000324238 FAM122CQ6P4D5 195 aa17.76■□□□□ 0.43
CRLF3-201ENST00000324238 PAPD4Q6PIY7 484 aaKnown RBP17.76■□□□□ 0.43
CRLF3-201ENST00000324238 ZNF584Q8IVC4 421 aa17.76■□□□□ 0.43
CRLF3-201ENST00000324238 MRGPRFQ96AM1 343 aa17.76■□□□□ 0.43
CRLF3-201ENST00000324238 LAT2Q9GZY6 243 aa17.76■□□□□ 0.43
CRLF3-201ENST00000324238 F12P00748 615 aaPredicted RBP17.76■□□□□ 0.43
CRLF3-201ENST00000324238 PMP2P02689 132 aa17.76■□□□□ 0.43
CRLF3-201ENST00000324238 BLKP51451 505 aa17.76■□□□□ 0.43
CRLF3-201ENST00000324238 ZNF519Q8TB69 540 aa17.76■□□□□ 0.43
CRLF3-201ENST00000324238 CCDC107Q8WV48 283 aa17.76■□□□□ 0.43
CRLF3-201ENST00000324238 MKL2Q9ULH7 1088 aa17.76■□□□□ 0.43
CRLF3-201ENST00000324238 PLCL2Q9UPR0 1127 aa17.76■□□□□ 0.43
CRLF3-201ENST00000324238 SDK2Q58EX2 2172 aa17.76■□□□□ 0.43
CRLF3-201ENST00000324238 A0A1B0GTQ1 180 aa17.76■□□□□ 0.43
CRLF3-201ENST00000324238 KANTRA0A1W2PQU2 76 aa17.76■□□□□ 0.43
CRLF3-201ENST00000324238 H3BML4 177 aa17.76■□□□□ 0.43
CRLF3-201ENST00000324238 ANOS1P23352 680 aa17.76■□□□□ 0.43
CRLF3-201ENST00000324238 PTCRAQ6ISU1 281 aaPredicted RBP17.76■□□□□ 0.43
CRLF3-201ENST00000324238 OR2W3Q7Z3T1 314 aa17.76■□□□□ 0.43
CRLF3-201ENST00000324238 TSTD1Q8NFU3 115 aa17.76■□□□□ 0.43
CRLF3-201ENST00000324238 MARC2Q969Z3 335 aa17.76■□□□□ 0.43
CRLF3-201ENST00000324238 LDAHQ9H6V9 325 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms