RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	ADAM10	O14672	748 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	SLC43A1	O75387	559 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	ECD	O95905	644 aa	Predicted RBP	9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	DHFR	P00374	187 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	SERPINA7	P05543	415 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	GSTT2B	P0CG30	244 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	TRAPPC2	P0DI81	140 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	TRAPPC2B	P0DI82	140 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	DLST	P36957	453 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	KIR3DL2	P43630	455 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	RFX2	P48378	723 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	CSNK1A1	P48729	337 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	CAPZA1	P52907	286 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	SCAND1	P57086	179 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	RPS18	P62269	152 aa	Known RBP	9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	MRPS10	P82664	201 aa	Known RBP	9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	CHAF1B	Q13112	559 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	CAMK2D	Q13557	499 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	TMEM244	Q5VVB8	128 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	DEGS2	Q6QHC5	323 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	SYT9	Q86SS6	491 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	CATSPERD	Q86XM0	798 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	RDH10	Q8IZV5	341 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	DTX3	Q8N9I9	347 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	WDSUB1	Q8N9V3	476 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	OR5H6	Q8NGV6	325 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	SYNPR	Q8TBG9	265 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	PAQR8	Q8TEZ7	354 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	CHAC2	Q8WUX2	184 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	KCNE4	Q8WWG9	221 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	CREB3L1	Q96BA8	519 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	NEDD4L	Q96PU5	975 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	AMELY	Q99218	206 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	NPAS1	Q99742	590 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	SOST	Q9BQB4	213 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	EMC6	Q9BV81	110 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	ABCG5	Q9H222	651 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	C1orf198	Q9H425	327 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	MOB1A	Q9H8S9	216 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	COPZ2	Q9P299	210 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	B4GALT7	Q9UBV7	327 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	STEAP1	Q9UHE8	339 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	PAIP2B	Q9ULR5	123 aa	Known RBP	9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	BOK	Q9UMX3	212 aa	Predicted RBP	9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	EMC9	Q9Y3B6	208 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	PCSK5	Q92824	1860 aa		9.62	□□□□□ -0.87
SPIDR-222	ENST00000524006	HELZ2	Q9BYK8	2649 aa	Known RBP	9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	TRBV5-7	A0A0A0MS05	114 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006		A0A1B0GVI7	797 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	TMEM269	A0A1B0GVZ9	245 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	LOC107986453	A0A1B0GWG9	222 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006		A0A1W2PQ72	361 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	MEGF11	A6BM72	1044 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006		B4DXG7	233 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	C21orf140	B9A014	251 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	ZNF878	C9JN71	531 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	CBR3	O75828	277 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	KRT33A	O76009	404 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	DKK1	O94907	266 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	VAMP5	O95183	116 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	WISP1	O95388	367 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	MT-CO3	P00414	261 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	CD59	P13987	128 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	ZNF20	P17024	532 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	FAU	P35544	74 aa	Known RBP	9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	ZNF84	P51523	738 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	CLDN17	P56750	224 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	RAB25	P57735	213 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	MRPS15	P82914	257 aa	Known RBP	9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	MFGE8	Q08431	387 aa	Predicted RBP	9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	CBX3	Q13185	183 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	ETFDH	Q16134	617 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	ZFP69	Q49AA0	526 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	TEX30	Q5JUR7	227 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	PDSS1	Q5T2R2	415 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	ABHD17B	Q5VST6	288 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	TIGD3	Q6B0B8	471 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	TMPPE	Q6ZT21	453 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	PRSS35	Q8N3Z0	413 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	NKAIN3	Q8N8D7	197 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	IL17RD	Q8NFM7	739 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	OR6X1	Q8NH79	312 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	FCAMR	Q8WWV6	532 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	C11orf40	Q8WZ69	217 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	MIB2	Q96AX9	1013 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	SLAMF6	Q96DU3	332 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	MAP6	Q96JE9	813 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	SFXN2	Q96NB2	322 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	KCNJ15	Q99712	375 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	NIPAL2	Q9H841	368 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	MOV10	Q9HCE1	1003 aa	Known RBP	9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	FANCF	Q9NPI8	374 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	DIABLO	Q9NR28	239 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	P4HTM	Q9NXG6	502 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	NLK	Q9UBE8	527 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	OR52A1	Q9UKL2	312 aa		9.61	□□□□□ -0.87
SPIDR-222	ENST00000524006	FLNB	O75369	2602 aa	Known RBP	9.6	□□□□□ -0.87
SPIDR-222	ENST00000524006	ACACA	Q13085	2346 aa		9.6	□□□□□ -0.87
SPIDR-222	ENST00000524006		A0A1B0GTH9	108 aa		9.6	□□□□□ -0.87
SPIDR-222	ENST00000524006		A0A1B0GVC2	190 aa		9.6	□□□□□ -0.87

Retrieved 100 of 20,778 RNA–protein pairs in 137 ms