RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 ALDH3A1P30838 453 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 S100A3P33764 101 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 MYBPC1Q00872 1141 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 ROR2Q01974 943 aaKnown RBP4.78□□□□□ -1.64
DNMT1-220ENST00000589351 SCN1BQ07699 218 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 SNTB2Q13425 540 aaKnown RBP4.78□□□□□ -1.64
DNMT1-220ENST00000589351 RIN1Q13671 783 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 NFYCQ13952 458 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 CCNIQ14094 377 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 LARS2Q15031 903 aaKnown RBP4.78□□□□□ -1.64
DNMT1-220ENST00000589351 MOGQ16653 247 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 FAM174BQ3ZCQ3 159 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 XKR7Q5GH72 579 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 SAXO2Q658L1 398 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 DGAT2L7PQ6IED9 249 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 ACSM5Q6NUN0 579 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 FAHD2BQ6P2I3 314 aaPredicted RBP4.78□□□□□ -1.64
DNMT1-220ENST00000589351 C5orf46Q6UWT4 87 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 RBMS3Q6XE24 437 aaKnown RBP4.78□□□□□ -1.64
DNMT1-220ENST00000589351 FRRS1Q6ZNA5 592 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 NET1Q7Z628 596 aaPredicted RBP4.78□□□□□ -1.64
DNMT1-220ENST00000589351 PEG10Q86TG7 708 aaKnown RBP4.78□□□□□ -1.64
DNMT1-220ENST00000589351 GSPT2Q8IYD1 628 aaKnown RBP4.78□□□□□ -1.64
DNMT1-220ENST00000589351 CLECL1Q8IZS7 167 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 C4orf33Q8N1A6 199 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 CADM2Q8N3J6 435 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 MFSD8Q8NHS3 518 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 RAB8BQ92930 207 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 SPSB4Q96A44 273 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 SLC25A36Q96CQ1 311 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 NEURL3Q96EH8 262 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 FAHD2AQ96GK7 314 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 FOXB1Q99853 325 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 SLC35A5Q9BS91 424 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 SOX7Q9BT81 388 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 ZNF416Q9BWM5 594 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 SERHL2Q9H4I8 314 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 PPP1R14DQ9NXH3 145 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 ASIC5Q9NY37 505 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 RPS6KB2Q9UBS0 482 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 FBXL3Q9UKT7 428 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 ARFGEF3Q5TH69 2177 aa4.78□□□□□ -1.64
DNMT1-220ENST00000589351 PLCE1Q9P212 2302 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 IGHV2OR16-5A0A0B4J2B6 119 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 CENPVL1A0A0U1RR11 272 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 TMEM129A0AVI4 362 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 KRTAP23-1A1A580 65 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 SLC22A23A1A5C7 686 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 CLDN24A6NM45 220 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 KRTAP29-1A8MX34 341 aaPredicted RBP4.77□□□□□ -1.65
DNMT1-220ENST00000589351 ZNF99A8MXY4 864 aaPredicted RBP4.77□□□□□ -1.65
DNMT1-220ENST00000589351 J3QLI3 93 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 L7N2F9 121 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 HMGN4O00479 90 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 PPIHO43447 177 aaKnown RBP4.77□□□□□ -1.65
DNMT1-220ENST00000589351 ZNF432O94892 652 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 DIRAS3O95661 229 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 KRT75O95678 551 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 RAB36O95755 333 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 NUDT17P0C025 328 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 MYZAPP0CAP1 466 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 SAGP10523 405 aaPredicted RBP4.77□□□□□ -1.65
DNMT1-220ENST00000589351 CD79AP11912 226 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 PRG2P13727 222 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 NR4A1P22736 598 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 CALCRP30988 508 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 IL2RGP31785 369 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 MC5RP33032 325 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 GLRXP35754 106 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 SLC15A1P46059 708 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 CRISP3P54108 245 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 UCP3P55916 312 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 CLDN17P56750 224 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 HILS1P60008 231 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 TUBA1BP68363 451 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 TUBA4AP68366 448 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 MRPS11P82912 194 aaKnown RBP4.77□□□□□ -1.65
DNMT1-220ENST00000589351 HGFACQ04756 655 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 CASP8Q14790 479 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 TRIP10Q15642 601 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 SYPL1Q16563 259 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 GSG1Q2KHT4 349 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 LIN52Q52LA3 116 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 PDCD4Q53EL6 469 aaKnown RBP4.77□□□□□ -1.65
DNMT1-220ENST00000589351 MRPL2Q5T653 305 aaKnown RBP4.77□□□□□ -1.65
DNMT1-220ENST00000589351 C1orf140Q5VVS0 124 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 ZNF621Q6ZSS3 439 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 TUBA1AQ71U36 451 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 OLIG3Q7RTU3 272 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 CLEC4FQ8N1N0 589 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 ZCCHC24Q8N2G6 241 aaKnown RBP4.77□□□□□ -1.65
DNMT1-220ENST00000589351 RIBC1Q8N443 379 aaPredicted RBP4.77□□□□□ -1.65
DNMT1-220ENST00000589351 BPIFB2Q8N4F0 458 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 EIF1ADQ8N9N8 165 aaKnown RBP4.77□□□□□ -1.65
DNMT1-220ENST00000589351 OR52M1Q8NGK5 317 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 OR52P1PQ8NH57 321 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 CLDND2Q8NHS1 167 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 ZNF671Q8TAW3 534 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 NANPQ8TBE9 248 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 SNX33Q8WV41 574 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms