RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 SUSD2Q9UGT4 822 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 SULT2B1O00204 365 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 TMPRSS11DO60235 418 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 THBS2P35442 1172 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 GZMMP51124 257 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 PCBP4P57723 403 aaKnown RBP14.7□□□□□ -0.06
NPHP3-201ENST00000337331 EXOSC6Q5RKV6 272 aaKnown RBP14.7□□□□□ -0.06
NPHP3-201ENST00000337331 HIST2H3PS2Q5TEC6 136 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 METRNLQ641Q3 311 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 IL22RA1Q8N6P7 574 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 SEMA4GQ9NTN9 838 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 SLCO1C1Q9NYB5 712 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 LSM5Q9Y4Y9 91 aaKnown RBP14.7□□□□□ -0.06
NPHP3-201ENST00000337331 DVL2O14641 736 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 ETHE1O95571 254 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 HPP00738 406 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 IFNA5P01569 189 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 HLA-DQB1P01920 261 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 GAAP10253 952 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 ZNF626Q68DY1 528 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 TIPARPQ7Z3E1 657 aaKnown RBP14.7□□□□□ -0.06
NPHP3-201ENST00000337331 TECPR1Q7Z6L1 1165 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 OR5D14Q8NGL3 314 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 OR2G2Q8NGZ5 317 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 NXPE3Q969Y0 559 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 ZNF707Q96C28 371 aaPredicted RBP14.7□□□□□ -0.06
NPHP3-201ENST00000337331 CHST8Q9H2A9 424 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 MED9Q9NWA0 146 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 ZNF587BE7ETH6 402 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 SCGB1D1O95968 90 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 PPA1Q15181 289 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 OR14L1PQ8NHC6 308 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 PRRT1Q99946 306 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 NXF5Q9H1B4 397 aaKnown RBP14.69□□□□□ -0.06
NPHP3-201ENST00000337331 WIF1Q9Y5W5 379 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 DLEC1Q9Y238 1755 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 PJVKQ0ZLH3 352 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 APC2O95996 2303 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 PRF1P14222 555 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 SRMP19623 302 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 TACR3P29371 465 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 OTX2P32243 289 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 CAV2P51636 162 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 LBX1P52954 281 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 HMGN3Q15651 99 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 OR2A2Q6IF42 318 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 CDCA3Q99618 268 aaPredicted RBP14.69□□□□□ -0.06
NPHP3-201ENST00000337331 FGF22Q9HCT0 170 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 PLEKHJ1Q9NW61 149 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 RASL12Q9NYN1 266 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 B3GALT1Q9Y5Z6 326 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 PHIPQ8WWQ0 1821 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 CXorf65A6NEN9 183 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 SERINC4A6NH21 518 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 DPM1O60762 260 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 IL5P05113 134 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 CSRP3P50461 194 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 RAB38P57729 211 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 TAS2R19P59542 299 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 PPIAP62937 165 aaKnown RBP14.69□□□□□ -0.06
NPHP3-201ENST00000337331 COX15Q7KZN9 410 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 ZNF595Q8IYB9 648 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 ZNF100Q8IYN0 542 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 SPPL3Q8TCT6 385 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 B4GALT7Q9UBV7 327 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 FBXO7Q9Y3I1 522 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 CSAG2Q9Y5P2 127 aa14.69□□□□□ -0.06
NPHP3-201ENST00000337331 SPTA1P02549 2419 aa14.68□□□□□ -0.06
NPHP3-201ENST00000337331 SCN1AP35498 2009 aa14.68□□□□□ -0.06
NPHP3-201ENST00000337331 ZNF729A6NN14 1252 aaPredicted RBP14.68□□□□□ -0.06
NPHP3-201ENST00000337331 UMAD1C9J7I0 102 aa14.68□□□□□ -0.06
NPHP3-201ENST00000337331 ZNF28P17035 718 aa14.68□□□□□ -0.06
NPHP3-201ENST00000337331 CHATP28329 748 aa14.68□□□□□ -0.06
NPHP3-201ENST00000337331 TAS2R20P59543 309 aa14.68□□□□□ -0.06
NPHP3-201ENST00000337331 TIAL1Q01085 375 aaKnown RBP eCLIP14.68□□□□□ -0.063e-6■■□□□ 11.7
NPHP3-201ENST00000337331 OR4C16Q8NGL9 310 aa14.68□□□□□ -0.06
NPHP3-201ENST00000337331 NELFAQ9H3P2 528 aa14.68□□□□□ -0.06
NPHP3-201ENST00000337331 ICOSLGO75144 302 aa14.68□□□□□ -0.06
NPHP3-201ENST00000337331 DNAJB6O75190 326 aa14.68□□□□□ -0.06
NPHP3-201ENST00000337331 NDUFB6O95139 128 aa14.68□□□□□ -0.06
NPHP3-201ENST00000337331 DUSP5Q16690 384 aa14.68□□□□□ -0.06
NPHP3-201ENST00000337331 C15orf54Q8N8G6 183 aa14.68□□□□□ -0.06
NPHP3-201ENST00000337331 OR51Q1Q8NH59 317 aa14.68□□□□□ -0.06
NPHP3-201ENST00000337331 NUDT22Q9BRQ3 303 aa14.68□□□□□ -0.06
NPHP3-201ENST00000337331 FBXO4Q9UKT5 387 aa14.68□□□□□ -0.06
NPHP3-201ENST00000337331 A0A1W2PR48 441 aa14.68□□□□□ -0.06
NPHP3-201ENST00000337331 HMGN4O00479 90 aa14.68□□□□□ -0.06
NPHP3-201ENST00000337331 SCAF4O95104 1147 aaKnown RBP14.68□□□□□ -0.06
NPHP3-201ENST00000337331 IRS1P35568 1242 aa14.68□□□□□ -0.06
NPHP3-201ENST00000337331 ZP2Q05996 745 aa14.68□□□□□ -0.06
NPHP3-201ENST00000337331 MALLQ13021 153 aa14.68□□□□□ -0.06
NPHP3-201ENST00000337331 SGPP2Q8IWX5 399 aa14.68□□□□□ -0.06
NPHP3-201ENST00000337331 OR52A5Q9H2C5 316 aa14.68□□□□□ -0.06
NPHP3-201ENST00000337331 MBNL1Q9NR56 388 aaKnown RBP14.68□□□□□ -0.06
NPHP3-201ENST00000337331 LRIT1Q9P2V4 623 aa14.68□□□□□ -0.06
NPHP3-201ENST00000337331 TRBV5-4A0A0C4DH59 114 aa14.67□□□□□ -0.06
NPHP3-201ENST00000337331 OR4E1P0C645 316 aa14.67□□□□□ -0.06
NPHP3-201ENST00000337331 TAGLN2P37802 199 aaKnown RBP14.67□□□□□ -0.06
NPHP3-201ENST00000337331 WNT3P56703 355 aa14.67□□□□□ -0.06
NPHP3-201ENST00000337331 ARF1P84077 181 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms