RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 TMCC3Q9ULS5 477 aa17.5■□□□□ 0.39
GTF3A-202ENST00000419181 FKBP7Q9Y680 259 aa17.5■□□□□ 0.39
GTF3A-202ENST00000419181 HIVEP2P31629 2446 aa17.5■□□□□ 0.39
GTF3A-202ENST00000419181 CHD3Q12873 2000 aaKnown RBP17.49■□□□□ 0.39
GTF3A-202ENST00000419181 A0A096LNT2 108 aa17.49■□□□□ 0.39
GTF3A-202ENST00000419181 IQCMA0A1B0GVH7 501 aa17.49■□□□□ 0.39
GTF3A-202ENST00000419181 A0A1W2PPL8 197 aa17.49■□□□□ 0.39
GTF3A-202ENST00000419181 KRT36O76013 467 aa17.49■□□□□ 0.39
GTF3A-202ENST00000419181 TXNDC12O95881 172 aa17.49■□□□□ 0.39
GTF3A-202ENST00000419181 CST2P09228 141 aa17.49■□□□□ 0.39
GTF3A-202ENST00000419181 CSF3P09919 207 aa17.49■□□□□ 0.39
GTF3A-202ENST00000419181 LAP3P28838 519 aa17.49■□□□□ 0.39
GTF3A-202ENST00000419181 EVX1P49640 407 aa17.49■□□□□ 0.39
GTF3A-202ENST00000419181 HMGA2P52926 109 aa17.49■□□□□ 0.39
GTF3A-202ENST00000419181 HSF2Q03933 536 aa17.49■□□□□ 0.39
GTF3A-202ENST00000419181 KRTAP1-1Q07627 177 aa17.49■□□□□ 0.39
GTF3A-202ENST00000419181 TBC1D28Q2M2D7 210 aa17.49■□□□□ 0.39
GTF3A-202ENST00000419181 C1orf94Q6P1W5 598 aa17.49■□□□□ 0.39
GTF3A-202ENST00000419181 ADCK1Q86TW2 530 aa17.49■□□□□ 0.39
GTF3A-202ENST00000419181 FANK1Q8TC84 345 aa17.49■□□□□ 0.39
GTF3A-202ENST00000419181 FAM168AQ92567 244 aa17.49■□□□□ 0.39
GTF3A-202ENST00000419181 ASB9Q96DX5 294 aa17.49■□□□□ 0.39
GTF3A-202ENST00000419181 MAGIXQ9H6Y5 334 aa17.49■□□□□ 0.39
GTF3A-202ENST00000419181 CDH20Q9HBT6 801 aa17.49■□□□□ 0.39
GTF3A-202ENST00000419181 POLE4Q9NR33 117 aa17.49■□□□□ 0.39
GTF3A-202ENST00000419181 VSX1Q9NZR4 365 aaPredicted RBP17.49■□□□□ 0.39
GTF3A-202ENST00000419181 IER3IP1Q9Y5U9 82 aa17.49■□□□□ 0.39
GTF3A-202ENST00000419181 LYVE1Q9Y5Y7 322 aa17.49■□□□□ 0.39
GTF3A-202ENST00000419181 ABCA1O95477 2261 aa17.49■□□□□ 0.39
GTF3A-202ENST00000419181 IGFBP1P08833 259 aaPredicted RBP17.48■□□□□ 0.39
GTF3A-202ENST00000419181 APEHP13798 732 aaKnown RBP17.48■□□□□ 0.39
GTF3A-202ENST00000419181 CTLA4P16410 223 aa17.48■□□□□ 0.39
GTF3A-202ENST00000419181 MSR1P21757 451 aa17.48■□□□□ 0.39
GTF3A-202ENST00000419181 APEX1P27695 318 aaKnown RBP17.48■□□□□ 0.39
GTF3A-202ENST00000419181 IFNGR2P38484 337 aa17.48■□□□□ 0.39
GTF3A-202ENST00000419181 GUCA1AP43080 201 aaPredicted RBP17.48■□□□□ 0.39
GTF3A-202ENST00000419181 GSSP48637 474 aa17.48■□□□□ 0.39
GTF3A-202ENST00000419181 PSG4Q00888 419 aa17.48■□□□□ 0.39
GTF3A-202ENST00000419181 ENDOGQ14249 297 aaKnown RBP17.48■□□□□ 0.39
GTF3A-202ENST00000419181 OR1J2Q8NGS2 313 aa17.48■□□□□ 0.39
GTF3A-202ENST00000419181 C10orf105Q8TEF2 133 aa17.48■□□□□ 0.39
GTF3A-202ENST00000419181 CCDC124Q96CT7 223 aaKnown RBP17.48■□□□□ 0.39
GTF3A-202ENST00000419181 CLPTM1LQ96KA5 538 aa17.48■□□□□ 0.39
GTF3A-202ENST00000419181 SYT4Q9H2B2 425 aa17.48■□□□□ 0.39
GTF3A-202ENST00000419181 OR52D1Q9H346 318 aa17.48■□□□□ 0.39
GTF3A-202ENST00000419181 SOCS2O14508 198 aa17.47■□□□□ 0.39
GTF3A-202ENST00000419181 UBOX5O94941 541 aa17.47■□□□□ 0.39
GTF3A-202ENST00000419181 SCG5P05408 212 aa17.47■□□□□ 0.39
GTF3A-202ENST00000419181 FAM157BP0CG42 384 aa17.47■□□□□ 0.39
GTF3A-202ENST00000419181 STOMP27105 288 aa17.47■□□□□ 0.39
GTF3A-202ENST00000419181 APLNRP35414 380 aa17.47■□□□□ 0.39
GTF3A-202ENST00000419181 RPS6KA3P51812 740 aa17.47■□□□□ 0.39
GTF3A-202ENST00000419181 PCBD1P61457 104 aa17.47■□□□□ 0.39
GTF3A-202ENST00000419181 RFX4Q33E94 735 aa17.47■□□□□ 0.39
GTF3A-202ENST00000419181 KRTAP21-3Q3LHN1 58 aa17.47■□□□□ 0.39
GTF3A-202ENST00000419181 PGBD2Q6P3X8 592 aa17.47■□□□□ 0.39
GTF3A-202ENST00000419181 PTCHD4Q6ZW05 846 aa17.47■□□□□ 0.39
GTF3A-202ENST00000419181 OR4C15Q8NGM1 316 aa17.47■□□□□ 0.39
GTF3A-202ENST00000419181 POP5Q969H6 163 aaKnown RBP17.47■□□□□ 0.39
GTF3A-202ENST00000419181 POM121L2Q96KW2 1035 aa17.47■□□□□ 0.39
GTF3A-202ENST00000419181 SYT3Q9BQG1 590 aa17.47■□□□□ 0.39
GTF3A-202ENST00000419181 ZNF416Q9BWM5 594 aa17.47■□□□□ 0.39
GTF3A-202ENST00000419181 TRIM15Q9C019 465 aa17.47■□□□□ 0.39
GTF3A-202ENST00000419181 OR2H1Q9GZK4 316 aa17.47■□□□□ 0.39
GTF3A-202ENST00000419181 RAB1BQ9H0U4 201 aa17.47■□□□□ 0.39
GTF3A-202ENST00000419181 WNT5BQ9H1J7 359 aa17.47■□□□□ 0.39
GTF3A-202ENST00000419181 LRMDAQ9H2I8 198 aa17.47■□□□□ 0.39
GTF3A-202ENST00000419181 DYNLRB1Q9NP97 96 aa17.47■□□□□ 0.39
GTF3A-202ENST00000419181 TNFRSF11BO00300 401 aa17.46■□□□□ 0.39
GTF3A-202ENST00000419181 IMPA2O14732 288 aa17.46■□□□□ 0.39
GTF3A-202ENST00000419181 ACOT8O14734 319 aa17.46■□□□□ 0.39
GTF3A-202ENST00000419181 SYNGR3O43761 229 aa17.46■□□□□ 0.39
GTF3A-202ENST00000419181 PPP1R3DO95685 299 aa17.46■□□□□ 0.39
GTF3A-202ENST00000419181 SLC25A16P16260 332 aa17.46■□□□□ 0.39
GTF3A-202ENST00000419181 PCSK6P29122 969 aa17.46■□□□□ 0.39
GTF3A-202ENST00000419181 SLC6A6P31641 620 aa17.46■□□□□ 0.39
GTF3A-202ENST00000419181 TSPAN31Q12999 210 aa17.46■□□□□ 0.39
GTF3A-202ENST00000419181 SYT9Q86SS6 491 aa17.46■□□□□ 0.39
GTF3A-202ENST00000419181 LRP11Q86VZ4 500 aa17.46■□□□□ 0.39
GTF3A-202ENST00000419181 ZCCHC24Q8N2G6 241 aaKnown RBP17.46■□□□□ 0.39
GTF3A-202ENST00000419181 AKR7LQ8NHP1 331 aa17.46■□□□□ 0.39
GTF3A-202ENST00000419181 GNPDA2Q8TDQ7 276 aa17.46■□□□□ 0.39
GTF3A-202ENST00000419181 BTBD10Q9BSF8 475 aa17.46■□□□□ 0.39
GTF3A-202ENST00000419181 THTPAQ9BU02 230 aa17.46■□□□□ 0.39
GTF3A-202ENST00000419181 MYOZ1Q9NP98 299 aaPredicted RBP17.46■□□□□ 0.39
GTF3A-202ENST00000419181 MYEF2Q9P2K5 600 aaKnown RBP17.46■□□□□ 0.39
GTF3A-202ENST00000419181 FZR1Q9UM11 496 aa17.46■□□□□ 0.39
GTF3A-202ENST00000419181 TIMM10BQ9Y5J6 103 aa17.46■□□□□ 0.39
GTF3A-202ENST00000419181 LOC100509620A0A075B734 347 aa17.45■□□□□ 0.38
GTF3A-202ENST00000419181 C12orf71A8MTZ7 269 aa17.45■□□□□ 0.38
GTF3A-202ENST00000419181 M0R233 179 aa17.45■□□□□ 0.38
GTF3A-202ENST00000419181 ARPC3O15145 178 aa17.45■□□□□ 0.38
GTF3A-202ENST00000419181 SLC16A7O60669 478 aa17.45■□□□□ 0.38
GTF3A-202ENST00000419181 ADRA2AP08913 450 aa17.45■□□□□ 0.38
GTF3A-202ENST00000419181 CDKN2AP42771 156 aaKnown RBP17.45■□□□□ 0.38
GTF3A-202ENST00000419181 RAD52P43351 418 aa17.45■□□□□ 0.38
GTF3A-202ENST00000419181 PDLIM4P50479 330 aa17.45■□□□□ 0.38
GTF3A-202ENST00000419181 UCP2P55851 309 aa17.45■□□□□ 0.38
GTF3A-202ENST00000419181 FAM98BQ52LJ0 330 aaKnown RBP17.45■□□□□ 0.38
GTF3A-202ENST00000419181 ZNF770Q6IQ21 691 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms