RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W ECM16Q04217 1267 aaKnown RBP2.11□□□□□ -2.07
CTF4YPR135W CFT2Q12102 859 aaPredicted RBP2.11□□□□□ -2.07
CTF4YPR135W KEL1P38853 1164 aaKnown RBP2.1□□□□□ -2.07
CTF4YPR135W HXT13P39924 564 aa2.1□□□□□ -2.07
CTF4YPR135W JHD1P40034 492 aa2.1□□□□□ -2.07
CTF4YPR135W KRI1P42846 591 aaKnown RBP2.1□□□□□ -2.07
CTF4YPR135W HXT17P53631 564 aa2.1□□□□□ -2.07
CTF4YPR135W HXT15P54854 567 aa2.1□□□□□ -2.07
CTF4YPR135W PRP42Q03776 544 aaKnown RBP2.1□□□□□ -2.07
CTF4YPR135W JIP5Q06214 492 aaPredicted RBP2.1□□□□□ -2.07
CTF4YPR135W MRL1Q06815 381 aa2.1□□□□□ -2.07
CTF4YPR135W LAS17Q12446 633 aa2.1□□□□□ -2.07
CTF4YPR135W HEM1P09950 548 aaPredicted RBP2.1□□□□□ -2.07
CTF4YPR135W SCT1P32784 759 aa2.1□□□□□ -2.07
CTF4YPR135W VAC8P39968 578 aa2.1□□□□□ -2.07
CTF4YPR135W GSM1P42950 618 aa2.1□□□□□ -2.07
CTF4YPR135W STU2P46675 888 aa2.1□□□□□ -2.07
CTF4YPR135W DSD1P53095 428 aa2.1□□□□□ -2.07
CTF4YPR135W TMN2Q04562 672 aa2.1□□□□□ -2.07
CTF4YPR135W YLR040CQ07988 224 aa2.1□□□□□ -2.07
CTF4YPR135W ALE1Q08548 619 aa2.1□□□□□ -2.07
CTF4YPR135W DBP5P20449 482 aaKnown RBP2.1□□□□□ -2.07
CTF4YPR135W PRE9P23638 258 aaKnown RBP2.1□□□□□ -2.07
CTF4YPR135W GRX4P32642 244 aa2.1□□□□□ -2.07
CTF4YPR135W YMR206WQ03695 313 aa2.1□□□□□ -2.07
CTF4YPR135W TAP42Q04372 366 aa2.1□□□□□ -2.07
CTF4YPR135W MET7Q08645 548 aa2.1□□□□□ -2.07
CTF4YPR135W YDR524C-BQ3E6R4 66 aa2.1□□□□□ -2.07
CTF4YPR135W RPS7AP26786 190 aaKnown RBP2.09□□□□□ -2.07
CTF4YPR135W OCT1P35999 772 aa2.09□□□□□ -2.07
CTF4YPR135W MCM7P38132 845 aa2.09□□□□□ -2.07
CTF4YPR135W SPL2P38839 148 aa2.09□□□□□ -2.07
CTF4YPR135W MPH1P40562 993 aa2.09□□□□□ -2.07
CTF4YPR135W BUD6P41697 788 aa2.09□□□□□ -2.07
CTF4YPR135W CHA4P43634 648 aa2.09□□□□□ -2.07
CTF4YPR135W GNP1P48813 663 aa2.09□□□□□ -2.07
CTF4YPR135W RPT4P53549 437 aaKnown RBP2.09□□□□□ -2.07
CTF4YPR135W ALG12P53730 551 aa2.09□□□□□ -2.07
CTF4YPR135W YOL073CQ08232 322 aa2.09□□□□□ -2.07
CTF4YPR135W DUR1,2P32528 1835 aaKnown RBP2.09□□□□□ -2.08
CTF4YPR135W CLN2P20438 545 aa2.09□□□□□ -2.08
CTF4YPR135W DBP2P24783 546 aaKnown RBP2.09□□□□□ -2.08
CTF4YPR135W SUL1P38359 859 aa2.09□□□□□ -2.08
CTF4YPR135W MAD1P40957 749 aa2.09□□□□□ -2.08
CTF4YPR135W MRPS18P42847 217 aa2.09□□□□□ -2.08
CTF4YPR135W QRI1P43123 477 aaKnown RBP2.09□□□□□ -2.08
CTF4YPR135W ALD6P54115 500 aaKnown RBP2.09□□□□□ -2.08
CTF4YPR135W RMD1Q03441 430 aa2.09□□□□□ -2.08
CTF4YPR135W SPR28Q04921 423 aa2.09□□□□□ -2.08
CTF4YPR135W SSF2Q12153 453 aaPredicted RBP2.09□□□□□ -2.08
CTF4YPR135W NPC2Q12408 173 aa2.09□□□□□ -2.08
CTF4YPR135W RPL11AP0C0W9 174 aaKnown RBP2.08□□□□□ -2.08
CTF4YPR135W TSR4P25040 408 aa2.08□□□□□ -2.08
CTF4YPR135W KCC4P25389 1037 aa2.08□□□□□ -2.08
CTF4YPR135W EFT1P32324 842 aaKnown RBP2.08□□□□□ -2.08
CTF4YPR135W TOM20P35180 183 aa2.08□□□□□ -2.08
CTF4YPR135W MCD4P36051 919 aa2.08□□□□□ -2.08
CTF4YPR135W CUE2P36075 443 aaKnown RBP2.08□□□□□ -2.08
CTF4YPR135W YTA12P40341 825 aa2.08□□□□□ -2.08
CTF4YPR135W MCH5Q08777 521 aa2.08□□□□□ -2.08
CTF4YPR135W ACM1Q08981 209 aa2.08□□□□□ -2.08
CTF4YPR135W MCD1Q12158 566 aa2.08□□□□□ -2.08
CTF4YPR135W RPL11BQ3E757 174 aaPredicted RBP2.08□□□□□ -2.08
CTF4YPR135W SLA2P33338 968 aa2.08□□□□□ -2.08
CTF4YPR135W RTR1P40084 226 aaPredicted RBP2.08□□□□□ -2.08
CTF4YPR135W ENT3P47160 408 aa2.08□□□□□ -2.08
CTF4YPR135W BUL1P48524 976 aa2.08□□□□□ -2.08
CTF4YPR135W STB4P50104 949 aa2.08□□□□□ -2.08
CTF4YPR135W MCM2P29469 868 aa2.07□□□□□ -2.08
CTF4YPR135W PPG1P32838 368 aa2.07□□□□□ -2.08
CTF4YPR135W APL2P36000 726 aaPredicted RBP2.07□□□□□ -2.08
CTF4YPR135W LYS14P40971 790 aa2.07□□□□□ -2.08
CTF4YPR135W VPS16Q03308 798 aa2.07□□□□□ -2.08
CTF4YPR135W RPN4Q03465 531 aa2.07□□□□□ -2.08
CTF4YPR135W ESF1Q06344 628 aaKnown RBP2.07□□□□□ -2.08
CTF4YPR135W HIM1Q06674 414 aa2.07□□□□□ -2.08
CTF4YPR135W IRC10Q08118 586 aa2.07□□□□□ -2.08
CTF4YPR135W PMC1P38929 1173 aaPredicted RBP2.07□□□□□ -2.08
CTF4YPR135W VAB2P40003 282 aa2.07□□□□□ -2.08
CTF4YPR135W HUL4P40985 892 aa2.07□□□□□ -2.08
CTF4YPR135W YRB30P53107 440 aaPredicted RBP2.07□□□□□ -2.08
CTF4YPR135W CWC24P53769 259 aa2.07□□□□□ -2.08
CTF4YPR135W DNM1P54861 757 aa2.07□□□□□ -2.08
CTF4YPR135W SPE1P08432 466 aa2.06□□□□□ -2.08
CTF4YPR135W LCB1P25045 558 aaKnown RBP2.06□□□□□ -2.08
CTF4YPR135W SRP101P32916 621 aa2.06□□□□□ -2.08
CTF4YPR135W PBP2P38151 413 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
CTF4YPR135W ACA1P39970 489 aa2.06□□□□□ -2.08
CTF4YPR135W OSW7P43611 510 aa2.06□□□□□ -2.08
CTF4YPR135W YGR012WP53206 393 aa2.06□□□□□ -2.08
CTF4YPR135W YGR122WP53272 402 aa2.06□□□□□ -2.08
CTF4YPR135W YNL034WP53963 612 aa2.06□□□□□ -2.08
CTF4YPR135W YNL018CP53976 612 aa2.06□□□□□ -2.08
CTF4YPR135W TIF35Q04067 274 aaKnown RBP2.06□□□□□ -2.08
CTF4YPR135W NSE3Q05541 303 aa2.06□□□□□ -2.08
CTF4YPR135W ENB1Q08299 606 aa2.06□□□□□ -2.08
CTF4YPR135W PIN2Q12057 282 aa2.06□□□□□ -2.08
CTF4YPR135W GNT1Q12096 491 aa2.06□□□□□ -2.08
CTF4YPR135W MOT1P32333 1867 aa2.06□□□□□ -2.08
CTF4YPR135W FKS1P38631 1876 aaKnown RBP2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 97.3 ms