RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCL1	YPR025C	YGL081W	P53156	320 aa		5.02	□□□□□ -1.61
CCL1	YPR025C	UME1	Q03010	460 aa		5.02	□□□□□ -1.61
CCL1	YPR025C	LAS17	Q12446	633 aa		5.02	□□□□□ -1.61
CCL1	YPR025C	TRM11	Q12463	433 aa		5.02	□□□□□ -1.61
CCL1	YPR025C	YLR415C	O13578	112 aa		5.01	□□□□□ -1.61
CCL1	YPR025C	HCM1	P25364	564 aa		5.01	□□□□□ -1.61
CCL1	YPR025C	PRP19	P32523	503 aa	Known RBP	5.01	□□□□□ -1.61
CCL1	YPR025C	CKB2	P38930	258 aa		5.01	□□□□□ -1.61
CCL1	YPR025C	YEN1	P40028	759 aa		5.01	□□□□□ -1.61
CCL1	YPR025C	YJR096W	P47137	282 aa		5.01	□□□□□ -1.61
CCL1	YPR025C	YBP2	P53169	641 aa		5.01	□□□□□ -1.61
CCL1	YPR025C	ORC4	P54791	529 aa		5.01	□□□□□ -1.61
CCL1	YPR025C	GPR1	Q12361	961 aa		5.01	□□□□□ -1.61
CCL1	YPR025C	PMA1	P05030	918 aa	Known RBP	5	□□□□□ -1.61
CCL1	YPR025C	GRX4	P32642	244 aa		5	□□□□□ -1.61
CCL1	YPR025C	MNN4	P36044	1178 aa		5	□□□□□ -1.61
CCL1	YPR025C	YKR018C	P36114	725 aa		5	□□□□□ -1.61
CCL1	YPR025C	MIP6	P38760	659 aa	Known RBP	5	□□□□□ -1.61
CCL1	YPR025C	MRPS35	P53292	345 aa		5	□□□□□ -1.61
CCL1	YPR025C	MTQ2	Q03920	221 aa	Predicted RBP	5	□□□□□ -1.61
CCL1	YPR025C	GPG1	P53130	126 aa		4.99	□□□□□ -1.61
CCL1	YPR025C	ERG5	P54781	538 aa		4.99	□□□□□ -1.61
CCL1	YPR025C	FAP7	Q12055	197 aa	Predicted RBP	4.99	□□□□□ -1.61
CCL1	YPR025C	TRP4	P07285	380 aa	Predicted RBP	4.98	□□□□□ -1.61
CCL1	YPR025C	YBR259W	P38338	688 aa		4.98	□□□□□ -1.61
CCL1	YPR025C	FKH2	P41813	862 aa		4.98	□□□□□ -1.61
CCL1	YPR025C	PRP31	P49704	494 aa	Predicted RBP	4.98	□□□□□ -1.61
CCL1	YPR025C	PCL10	P53124	433 aa		4.98	□□□□□ -1.61
CCL1	YPR025C	NRG1	Q03125	231 aa		4.98	□□□□□ -1.61
CCL1	YPR025C	HFD1	Q04458	532 aa		4.98	□□□□□ -1.61
CCL1	YPR025C	AIM39	Q08223	395 aa		4.98	□□□□□ -1.61
CCL1	YPR025C	TDA3	P38758	523 aa		4.97	□□□□□ -1.61
CCL1	YPR025C	SUN4	P53616	420 aa		4.97	□□□□□ -1.61
CCL1	YPR025C	ARP4	P80428	489 aa		4.97	□□□□□ -1.61
CCL1	YPR025C	NTO1	Q12311	748 aa		4.97	□□□□□ -1.61
CCL1	YPR025C	GPP1	P41277	250 aa	Known RBP	4.96	□□□□□ -1.62
CCL1	YPR025C	LEE1	Q02799	301 aa	Known RBP	4.96	□□□□□ -1.62
CCL1	YPR025C	ADE2	P21264	571 aa	Known RBP	4.95	□□□□□ -1.62
CCL1	YPR025C	HRR25	P29295	494 aa	Known RBP	4.95	□□□□□ -1.62
CCL1	YPR025C	RET2	P43621	546 aa		4.95	□□□□□ -1.62
CCL1	YPR025C	BRE5	P53741	515 aa	Known RBP	4.95	□□□□□ -1.62
CCL1	YPR025C	GPD1	Q00055	391 aa	Known RBP	4.95	□□□□□ -1.62
CCL1	YPR025C	DLT1	Q04216	342 aa		4.95	□□□□□ -1.62
CCL1	YPR025C	YTM1	Q12024	460 aa	Predicted RBP	4.95	□□□□□ -1.62
CCL1	YPR025C	TGL5	Q12043	749 aa		4.95	□□□□□ -1.62
CCL1	YPR025C	DCS2	Q12123	353 aa		4.95	□□□□□ -1.62
CCL1	YPR025C	MET3	P08536	511 aa		4.94	□□□□□ -1.62
CCL1	YPR025C	ERG4	P25340	473 aa		4.94	□□□□□ -1.62
CCL1	YPR025C	EFT1	P32324	842 aa	Known RBP	4.94	□□□□□ -1.62
CCL1	YPR025C	DEF1	P35732	738 aa	Known RBP	4.94	□□□□□ -1.62
CCL1	YPR025C	SIC1	P38634	284 aa		4.94	□□□□□ -1.62
CCL1	YPR025C	YHR112C	P38716	378 aa		4.94	□□□□□ -1.62
CCL1	YPR025C	SSZ1	P38788	538 aa	Known RBP	4.94	□□□□□ -1.62
CCL1	YPR025C	YGR153W	P48238	217 aa		4.94	□□□□□ -1.62
CCL1	YPR025C	BUL1	P48524	976 aa		4.94	□□□□□ -1.62
CCL1	YPR025C	MUP1	P50276	574 aa		4.94	□□□□□ -1.62
CCL1	YPR025C	CTF4	Q01454	927 aa		4.94	□□□□□ -1.62
CCL1	YPR025C	TRM13	Q12383	476 aa		4.94	□□□□□ -1.62
CCL1	YPR025C	CAF20	P12962	161 aa	Known RBP	4.93	□□□□□ -1.62
CCL1	YPR025C	YKR075C	P36155	307 aa		4.93	□□□□□ -1.62
CCL1	YPR025C	MAL31	P38156	614 aa		4.93	□□□□□ -1.62
CCL1	YPR025C	YHR202W	P38887	602 aa		4.93	□□□□□ -1.62
CCL1	YPR025C	OAF1	P39720	1047 aa	Predicted RBP	4.93	□□□□□ -1.62
CCL1	YPR025C	AIM21	P40563	679 aa		4.93	□□□□□ -1.62
CCL1	YPR025C	GZF3	P42944	551 aa	Known RBP	4.93	□□□□□ -1.62
CCL1	YPR025C	SET2	P46995	733 aa	Known RBP	4.93	□□□□□ -1.62
CCL1	YPR025C	BFA1	P47113	574 aa		4.93	□□□□□ -1.62
CCL1	YPR025C	TEX1	P53851	422 aa	Known RBP	4.93	□□□□□ -1.62
CCL1	YPR025C	ARG5,6	Q01217	863 aa		4.93	□□□□□ -1.62
CCL1	YPR025C	GAD1	Q04792	585 aa		4.93	□□□□□ -1.62
CCL1	YPR025C	PMI40	P29952	429 aa	Known RBP	4.92	□□□□□ -1.62
CCL1	YPR025C	APL2	P36000	726 aa	Predicted RBP	4.92	□□□□□ -1.62
CCL1	YPR025C	APT2	P36973	181 aa		4.92	□□□□□ -1.62
CCL1	YPR025C	KTR4	P38131	464 aa		4.92	□□□□□ -1.62
CCL1	YPR025C	APN2	P38207	520 aa		4.92	□□□□□ -1.62
CCL1	YPR025C	SUL1	P38359	859 aa		4.92	□□□□□ -1.62
CCL1	YPR025C	YJR039W	P47107	1121 aa		4.92	□□□□□ -1.62
CCL1	YPR025C	AMA1	P50082	593 aa		4.92	□□□□□ -1.62
CCL1	YPR025C	ISA1	Q07821	250 aa	Predicted RBP	4.92	□□□□□ -1.62
CCL1	YPR025C	SSB1	P11484	613 aa	Known RBP	4.91	□□□□□ -1.62
CCL1	YPR025C	AKL1	P38080	1108 aa	Known RBP	4.91	□□□□□ -1.62
CCL1	YPR025C	ECM1	P39715	212 aa		4.91	□□□□□ -1.62
CCL1	YPR025C	NUG1	P40010	520 aa	Known RBP	4.91	□□□□□ -1.62
CCL1	YPR025C	SSB2	P40150	613 aa	Known RBP	4.91	□□□□□ -1.62
CCL1	YPR025C	ELO3	P40319	345 aa		4.91	□□□□□ -1.62
CCL1	YPR025C	CCT5	P40413	562 aa	Known RBP	4.91	□□□□□ -1.62
CCL1	YPR025C	YIR042C	P40586	236 aa		4.91	□□□□□ -1.62
CCL1	YPR025C	COX18	P53239	316 aa		4.91	□□□□□ -1.62
CCL1	YPR025C	ECM9	Q02202	377 aa		4.91	□□□□□ -1.62
CCL1	YPR025C	YLR040C	Q07988	224 aa		4.91	□□□□□ -1.62
CCL1	YPR025C	TMA17	Q12513	150 aa		4.91	□□□□□ -1.62
CCL1	YPR025C	LAT1	P12695	482 aa	Known RBP	4.9	□□□□□ -1.63
CCL1	YPR025C	TRZ1	P36159	838 aa	Predicted RBP	4.9	□□□□□ -1.63
CCL1	YPR025C	MNN11	P46985	422 aa	Known RBP	4.9	□□□□□ -1.63
CCL1	YPR025C	KIN4	Q01919	800 aa		4.9	□□□□□ -1.63
CCL1	YPR025C	RNT1	Q02555	471 aa		4.9	□□□□□ -1.63
CCL1	YPR025C	REC102	Q02721	264 aa		4.9	□□□□□ -1.63
CCL1	YPR025C	YHM2	Q04013	314 aa		4.9	□□□□□ -1.63
CCL1	YPR025C	URN1	Q06525	465 aa	Known RBP	4.9	□□□□□ -1.63
CCL1	YPR025C	MCM21	Q06675	368 aa		4.9	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms