RNA–Protein interactions for RNA: YPR008W

HAA1, Transcript of Transcriptional activator involved in adaptation to weak acid stress, yeast

Gene HAA1, Length 2,085 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HAA1	YPR008W	RPN4	Q03465	531 aa		3.83	□□□□□ -1.8
HAA1	YPR008W	RPA190	P10964	1664 aa	Known RBP	3.83	□□□□□ -1.8
HAA1	YPR008W	ULS1	Q08562	1619 aa		3.82	□□□□□ -1.8
HAA1	YPR008W	TY1B-JR2	P47100	1755 aa	Known RBP	3.82	□□□□□ -1.8
HAA1	YPR008W	TY1B-ER2	Q03619	1755 aa		3.82	□□□□□ -1.8
HAA1	YPR008W	TY1B-MR1	Q04214	1755 aa		3.82	□□□□□ -1.8
HAA1	YPR008W	TY1B-MR2	Q04670	1755 aa	Known RBP	3.82	□□□□□ -1.8
HAA1	YPR008W	TY1B-LR1	Q12088	1755 aa	Known RBP	3.82	□□□□□ -1.8
HAA1	YPR008W	TY1B-NL1	Q12112	1755 aa		3.82	□□□□□ -1.8
HAA1	YPR008W	TY1B-GR1	Q12141	1755 aa		3.82	□□□□□ -1.8
HAA1	YPR008W	TY1B-BL	Q12490	1755 aa		3.82	□□□□□ -1.8
HAA1	YPR008W	ALG7	P07286	448 aa		3.82	□□□□□ -1.8
HAA1	YPR008W	YDR338C	Q05497	695 aa		3.82	□□□□□ -1.8
HAA1	YPR008W	MLP2	P40457	1679 aa		3.82	□□□□□ -1.8
HAA1	YPR008W	YDR514C	Q04408	483 aa		3.82	□□□□□ -1.8
HAA1	YPR008W	GEA1	P47102	1408 aa	Predicted RBP	3.82	□□□□□ -1.8
HAA1	YPR008W	YKL091C	P33324	310 aa	Known RBP	3.81	□□□□□ -1.8
HAA1	YPR008W	YBR053C	P38235	358 aa		3.81	□□□□□ -1.8
HAA1	YPR008W	HSV2	P50079	448 aa	Predicted RBP	3.81	□□□□□ -1.8
HAA1	YPR008W	STB4	P50104	949 aa		3.81	□□□□□ -1.8
HAA1	YPR008W	RNT1	Q02555	471 aa		3.81	□□□□□ -1.8
HAA1	YPR008W	RSC3	Q06639	885 aa		3.81	□□□□□ -1.8
HAA1	YPR008W	FRE5	Q08908	694 aa		3.81	□□□□□ -1.8
HAA1	YPR008W	PPR1	P07272	904 aa	Predicted RBP	3.8	□□□□□ -1.8
HAA1	YPR008W	SAP190	P36123	1033 aa		3.8	□□□□□ -1.8
HAA1	YPR008W	RLP7	P40693	322 aa	Known RBP	3.8	□□□□□ -1.8
HAA1	YPR008W	MUP1	P50276	574 aa		3.8	□□□□□ -1.8
HAA1	YPR008W	MET5	P47169	1442 aa		3.8	□□□□□ -1.8
HAA1	YPR008W	NUP159	P40477	1460 aa		3.8	□□□□□ -1.8
HAA1	YPR008W	MEF1	P25039	761 aa		3.8	□□□□□ -1.8
HAA1	YPR008W	OAR1	P35731	278 aa		3.8	□□□□□ -1.8
HAA1	YPR008W	PPS1	P38148	807 aa		3.8	□□□□□ -1.8
HAA1	YPR008W	SET5	P38890	526 aa	Known RBP	3.8	□□□□□ -1.8
HAA1	YPR008W	PZF1	P39933	429 aa		3.8	□□□□□ -1.8
HAA1	YPR008W	CHZ1	P40019	153 aa	Predicted RBP	3.8	□□□□□ -1.8
HAA1	YPR008W	ELO3	P40319	345 aa		3.8	□□□□□ -1.8
HAA1	YPR008W	REH1	Q06709	432 aa		3.8	□□□□□ -1.8
HAA1	YPR008W	IKI3	Q06706	1349 aa	Known RBP	3.8	□□□□□ -1.8
HAA1	YPR008W	NTE1	Q04958	1679 aa		3.79	□□□□□ -1.8
HAA1	YPR008W	GEA2	P39993	1459 aa	Known RBP	3.79	□□□□□ -1.8
HAA1	YPR008W	YLR415C	O13578	112 aa		3.79	□□□□□ -1.8
HAA1	YPR008W	MTC2	P34246	357 aa		3.79	□□□□□ -1.8
HAA1	YPR008W	NUP82	P40368	713 aa		3.79	□□□□□ -1.8
HAA1	YPR008W	ZIP2	P53061	704 aa		3.79	□□□□□ -1.8
HAA1	YPR008W	PKH1	Q03407	766 aa		3.79	□□□□□ -1.8
HAA1	YPR008W	MCD4	P36051	919 aa		3.79	□□□□□ -1.8
HAA1	YPR008W	DLT1	Q04216	342 aa		3.79	□□□□□ -1.8
HAA1	YPR008W	TGL5	Q12043	749 aa		3.79	□□□□□ -1.8
HAA1	YPR008W	YOR131C	Q12486	218 aa		3.79	□□□□□ -1.8
HAA1	YPR008W	CIT2	P08679	460 aa		3.78	□□□□□ -1.8
HAA1	YPR008W	TMN2	Q04562	672 aa		3.78	□□□□□ -1.8
HAA1	YPR008W	CRR1	Q05790	422 aa		3.78	□□□□□ -1.8
HAA1	YPR008W	URN1	Q06525	465 aa	Known RBP	3.78	□□□□□ -1.8
HAA1	YPR008W	TAD3	Q9URQ3	322 aa		3.78	□□□□□ -1.8
HAA1	YPR008W	RPO21	P04050	1733 aa	Known RBP	3.78	□□□□□ -1.8
HAA1	YPR008W	TY3B-G	Q99315	1547 aa		3.78	□□□□□ -1.8
HAA1	YPR008W	CDC9	P04819	755 aa		3.77	□□□□□ -1.81
HAA1	YPR008W	CAF20	P12962	161 aa	Known RBP	3.77	□□□□□ -1.81
HAA1	YPR008W	MIH1	P23748	554 aa		3.77	□□□□□ -1.81
HAA1	YPR008W	SHR5	P41912	237 aa		3.77	□□□□□ -1.81
HAA1	YPR008W	ALY2	P47029	1046 aa		3.77	□□□□□ -1.81
HAA1	YPR008W	ADY4	Q05955	493 aa		3.77	□□□□□ -1.81
HAA1	YPR008W	Q0142	Q9ZZW4	58 aa		3.77	□□□□□ -1.81
HAA1	YPR008W	DIF1	O13577	133 aa		3.77	□□□□□ -1.81
HAA1	YPR008W	MDM12	Q92328	271 aa		3.77	□□□□□ -1.81
HAA1	YPR008W	NUP170	P38181	1502 aa		3.77	□□□□□ -1.81
HAA1	YPR008W	IRC20	Q06554	1556 aa		3.77	□□□□□ -1.81
HAA1	YPR008W	MET3	P08536	511 aa		3.76	□□□□□ -1.81
HAA1	YPR008W	VPS15	P22219	1454 aa		3.76	□□□□□ -1.81
HAA1	YPR008W	YJL163C	P46996	555 aa		3.76	□□□□□ -1.81
HAA1	YPR008W	NRG1	Q03125	231 aa		3.76	□□□□□ -1.81
HAA1	YPR008W	OMS1	Q06668	471 aa		3.76	□□□□□ -1.81
HAA1	YPR008W	IRC13	Q08630	104 aa		3.76	□□□□□ -1.81
HAA1	YPR008W	YLR149C	Q99296	730 aa		3.76	□□□□□ -1.81
HAA1	YPR008W	PDR12	Q02785	1511 aa		3.76	□□□□□ -1.81
HAA1	YPR008W	SCT1	P32784	759 aa		3.75	□□□□□ -1.81
HAA1	YPR008W	SIC1	P38634	284 aa		3.75	□□□□□ -1.81
HAA1	YPR008W	HOS4	P40480	1083 aa		3.75	□□□□□ -1.81
HAA1	YPR008W	ZDS1	P50111	915 aa	Known RBP	3.75	□□□□□ -1.81
HAA1	YPR008W	RGC1	Q06108	1083 aa	Known RBP	3.75	□□□□□ -1.81
HAA1	YPR008W	MCH5	Q08777	521 aa		3.75	□□□□□ -1.81
HAA1	YPR008W	CAT8	P39113	1433 aa		3.75	□□□□□ -1.81
HAA1	YPR008W	MTR3	P48240	250 aa	Predicted RBP	3.75	□□□□□ -1.81
HAA1	YPR008W	YRF1-1	P0CX20	1796 aa		3.74	□□□□□ -1.81
HAA1	YPR008W	YRF1-5	P0CX21	1796 aa		3.74	□□□□□ -1.81
HAA1	YPR008W	YRF1-8	P0CX22	1796 aa		3.74	□□□□□ -1.81
HAA1	YPR008W	PHO8	P11491	566 aa		3.74	□□□□□ -1.81
HAA1	YPR008W	VBA3	P25594	458 aa		3.74	□□□□□ -1.81
HAA1	YPR008W	TEX1	P53851	422 aa	Known RBP	3.74	□□□□□ -1.81
HAA1	YPR008W	ACF2	Q12168	779 aa		3.74	□□□□□ -1.81
HAA1	YPR008W	SSM4	P40318	1319 aa		3.74	□□□□□ -1.81
HAA1	YPR008W	GND2	P53319	492 aa		3.74	□□□□□ -1.81
HAA1	YPR008W	PDR10	P51533	1564 aa		3.73	□□□□□ -1.81
HAA1	YPR008W	MTH1	P35198	433 aa		3.73	□□□□□ -1.81
HAA1	YPR008W	YIR042C	P40586	236 aa		3.73	□□□□□ -1.81
HAA1	YPR008W	CAF16	P43569	289 aa		3.73	□□□□□ -1.81
HAA1	YPR008W	UBA2	P52488	636 aa		3.73	□□□□□ -1.81
HAA1	YPR008W	YBT1	P32386	1661 aa		3.73	□□□□□ -1.81
HAA1	YPR008W	GDB1	Q06625	1536 aa		3.72	□□□□□ -1.81
HAA1	YPR008W	LAT1	P12695	482 aa	Known RBP	3.72	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms