RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeastyeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP16YPL072W STO1P34160 861 aaKnown RBP3.93□□□□□ -1.78
UBP16YPL072W PBP2P38151 413 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
UBP16YPL072W CAF16P43569 289 aa3.93□□□□□ -1.78
UBP16YPL072W BNA2P47125 453 aa3.93□□□□□ -1.78
UBP16YPL072W PRP31P49704 494 aaPredicted RBP3.93□□□□□ -1.78
UBP16YPL072W TEL2P53038 688 aa3.93□□□□□ -1.78
UBP16YPL072W YML122CQ03207 126 aa3.93□□□□□ -1.78
UBP16YPL072W SSL2Q00578 843 aa3.92□□□□□ -1.78
UBP16YPL072W YLR149CQ99296 730 aa3.92□□□□□ -1.78
UBP16YPL072W HIR1P32479 840 aa3.91□□□□□ -1.78
UBP16YPL072W APL2P36000 726 aaPredicted RBP3.91□□□□□ -1.78
UBP16YPL072W RPN10P38886 268 aaKnown RBP3.91□□□□□ -1.78
UBP16YPL072W ATF1P40353 525 aa3.91□□□□□ -1.78
UBP16YPL072W YFL052WP43551 465 aa3.91□□□□□ -1.78
UBP16YPL072W YAP1802P53309 568 aa3.91□□□□□ -1.78
UBP16YPL072W ORC4P54791 529 aa3.91□□□□□ -1.78
UBP16YPL072W SNP1Q00916 300 aaPredicted RBP3.91□□□□□ -1.78
UBP16YPL072W CDC9P04819 755 aa3.9□□□□□ -1.78
UBP16YPL072W SIR3P06701 978 aa3.9□□□□□ -1.78
UBP16YPL072W GFA1P14742 717 aaKnown RBP3.9□□□□□ -1.78
UBP16YPL072W CDC43P18898 376 aa3.9□□□□□ -1.78
UBP16YPL072W ADE2P21264 571 aaKnown RBP3.9□□□□□ -1.78
UBP16YPL072W GSY1P23337 708 aa3.9□□□□□ -1.78
UBP16YPL072W YHR112CP38716 378 aa3.9□□□□□ -1.78
UBP16YPL072W MIP6P38760 659 aaKnown RBP3.9□□□□□ -1.78
UBP16YPL072W REV7P38927 245 aa3.9□□□□□ -1.78
UBP16YPL072W CCT3P39077 534 aaKnown RBP3.9□□□□□ -1.78
UBP16YPL072W NUP82P40368 713 aa3.9□□□□□ -1.78
UBP16YPL072W ARG5,6Q01217 863 aa3.9□□□□□ -1.78
UBP16YPL072W SUT2Q12286 268 aa3.9□□□□□ -1.78
UBP16YPL072W KIN3P22209 435 aa3.9□□□□□ -1.79
UBP16YPL072W CUE2P36075 443 aaKnown RBP3.9□□□□□ -1.79
UBP16YPL072W TRZ1P36159 838 aaPredicted RBP3.9□□□□□ -1.79
UBP16YPL072W TDP1P38319 544 aa3.9□□□□□ -1.79
UBP16YPL072W CBR1P38626 284 aaKnown RBP3.9□□□□□ -1.79
UBP16YPL072W VPS73P53142 486 aaKnown RBP3.9□□□□□ -1.79
UBP16YPL072W NPY1P53164 384 aa3.9□□□□□ -1.79
UBP16YPL072W SMX3P54999 86 aaPredicted RBP3.9□□□□□ -1.79
UBP16YPL072W CTK1Q03957 528 aaKnown RBP3.9□□□□□ -1.79
UBP16YPL072W MCM21Q06675 368 aa3.9□□□□□ -1.79
UBP16YPL072W YLR125WQ12138 136 aa3.9□□□□□ -1.79
UBP16YPL072W Q0142Q9ZZW4 58 aa3.9□□□□□ -1.79
UBP16YPL072W APT2P36973 181 aa3.89□□□□□ -1.79
UBP16YPL072W MTL1P53214 551 aa3.89□□□□□ -1.79
UBP16YPL072W YKL033W-AQ86ZR7 236 aa3.89□□□□□ -1.79
UBP16YPL072W PYC1P11154 1178 aaKnown RBP3.88□□□□□ -1.79
UBP16YPL072W PHO8P11491 566 aa3.88□□□□□ -1.79
UBP16YPL072W HCA4P20448 770 aaKnown RBP3.88□□□□□ -1.79
UBP16YPL072W MIH1P23748 554 aa3.88□□□□□ -1.79
UBP16YPL072W VBA3P25594 458 aa3.88□□□□□ -1.79
UBP16YPL072W FMO1P38866 432 aa3.88□□□□□ -1.79
UBP16YPL072W LYS9P38999 446 aa3.88□□□□□ -1.79
UBP16YPL072W TAH11P47112 604 aa3.88□□□□□ -1.79
UBP16YPL072W NHX1Q04121 633 aa3.88□□□□□ -1.79
UBP16YPL072W MEF1P25039 761 aa3.87□□□□□ -1.79
UBP16YPL072W MSH2P25847 964 aa3.87□□□□□ -1.79
UBP16YPL072W HOG1P32485 435 aa3.87□□□□□ -1.79
UBP16YPL072W YKR051WP36142 418 aa3.87□□□□□ -1.79
UBP16YPL072W HSL7P38274 827 aa3.87□□□□□ -1.79
UBP16YPL072W DSS1P39112 969 aa3.87□□□□□ -1.79
UBP16YPL072W NUP60P39705 539 aa3.87□□□□□ -1.79
UBP16YPL072W PAN2P53010 1115 aaPredicted RBP3.87□□□□□ -1.79
UBP16YPL072W UGO1Q03327 502 aa3.87□□□□□ -1.79
UBP16YPL072W HRP1Q99383 534 aaKnown RBP3.87□□□□□ -1.79
UBP16YPL072W SRD1P09007 221 aa3.86□□□□□ -1.79
UBP16YPL072W DMC1P25453 334 aa3.86□□□□□ -1.79
UBP16YPL072W MVD1P32377 396 aaKnown RBP3.86□□□□□ -1.79
UBP16YPL072W YKR018CP36114 725 aa3.86□□□□□ -1.79
UBP16YPL072W GID8P40208 455 aa3.86□□□□□ -1.79
UBP16YPL072W NDC80P40460 691 aa3.86□□□□□ -1.79
UBP16YPL072W REC102Q02721 264 aa3.86□□□□□ -1.79
UBP16YPL072W HMO1Q03973 246 aaKnown RBP3.86□□□□□ -1.79
UBP16YPL072W RPN7Q06103 429 aaKnown RBP3.86□□□□□ -1.79
UBP16YPL072W TAF3Q12297 353 aa3.86□□□□□ -1.79
UBP16YPL072W NDJ1Q12366 352 aa3.86□□□□□ -1.79
UBP16YPL072W ERG6P25087 383 aaKnown RBP3.85□□□□□ -1.79
UBP16YPL072W PEX6P33760 1030 aa3.85□□□□□ -1.79
UBP16YPL072W SFB3P38810 929 aa3.85□□□□□ -1.79
UBP16YPL072W YJL206CP39529 758 aa3.85□□□□□ -1.79
UBP16YPL072W YIL166CP40445 542 aa3.85□□□□□ -1.79
UBP16YPL072W CCT7P42943 550 aaKnown RBP3.85□□□□□ -1.79
UBP16YPL072W PCL10P53124 433 aa3.85□□□□□ -1.79
UBP16YPL072W MET6P05694 767 aaKnown RBP3.85□□□□□ -1.79
UBP16YPL072W ILV6P25605 309 aaKnown RBP3.85□□□□□ -1.79
UBP16YPL072W THI4P32318 326 aa3.85□□□□□ -1.79
UBP16YPL072W PPZ2P33329 710 aa3.85□□□□□ -1.79
UBP16YPL072W HRB1P38922 454 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
UBP16YPL072W FHN1P53279 174 aa3.85□□□□□ -1.79
UBP16YPL072W LGE1Q02796 332 aaKnown RBP3.85□□□□□ -1.79
UBP16YPL072W COG8Q04632 607 aa3.85□□□□□ -1.79
UBP16YPL072W CIT2P08679 460 aa3.84□□□□□ -1.8
UBP16YPL072W RNR1P21524 888 aaKnown RBP3.84□□□□□ -1.8
UBP16YPL072W YEL1P34225 687 aa3.84□□□□□ -1.8
UBP16YPL072W PHO11P35842 467 aa3.84□□□□□ -1.8
UBP16YPL072W UBS1P38290 277 aa3.84□□□□□ -1.8
UBP16YPL072W PHO12P38693 467 aa3.84□□□□□ -1.8
UBP16YPL072W GET2P40056 285 aa3.84□□□□□ -1.8
UBP16YPL072W ARG2P40360 574 aa3.84□□□□□ -1.8
UBP16YPL072W OSW7P43611 510 aa3.84□□□□□ -1.8
UBP16YPL072W BNR1P40450 1375 aa3.83□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms