RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W YBR238CP38330 731 aaKnown RBP3.51□□□□□ -1.85
MSH2YOL090W AXL2P38928 823 aa3.51□□□□□ -1.85
MSH2YOL090W SPC72P39723 622 aa3.51□□□□□ -1.85
MSH2YOL090W TOK1P40310 691 aa3.51□□□□□ -1.85
MSH2YOL090W RIC1P40395 1056 aa3.51□□□□□ -1.85
MSH2YOL090W CCT8P47079 568 aaKnown RBP3.51□□□□□ -1.85
MSH2YOL090W ATP22P50273 684 aaPredicted RBP3.51□□□□□ -1.85
MSH2YOL090W RRT6P53117 311 aaPredicted RBP3.51□□□□□ -1.85
MSH2YOL090W YLR287CQ05881 355 aa3.51□□□□□ -1.85
MSH2YOL090W BLS1Q06071 122 aa3.51□□□□□ -1.85
MSH2YOL090W GUP2Q08929 609 aa3.51□□□□□ -1.85
MSH2YOL090W RPS21BQ3E754 87 aaKnown RBP3.51□□□□□ -1.85
MSH2YOL090W HOP1P20050 605 aa3.51□□□□□ -1.85
MSH2YOL090W DBP2P24783 546 aaKnown RBP3.51□□□□□ -1.85
MSH2YOL090W RPC53P25441 422 aa3.51□□□□□ -1.85
MSH2YOL090W AAR2P32357 355 aaPredicted RBP3.51□□□□□ -1.85
MSH2YOL090W FAT1P38225 669 aa3.51□□□□□ -1.85
MSH2YOL090W CPR6P53691 371 aaKnown RBP3.51□□□□□ -1.85
MSH2YOL090W TEP1P53916 434 aa3.51□□□□□ -1.85
MSH2YOL090W ATP25Q03153 612 aa3.51□□□□□ -1.85
MSH2YOL090W DBP10Q12389 995 aaKnown RBP3.51□□□□□ -1.85
MSH2YOL090W SSM4P40318 1319 aa3.5□□□□□ -1.85
MSH2YOL090W SCP160P06105 1222 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85 RIP-Chip
MSH2YOL090W MLS1P30952 554 aa3.5□□□□□ -1.85
MSH2YOL090W RRF1P38771 230 aa3.5□□□□□ -1.85
MSH2YOL090W EMP65P40085 556 aa3.5□□□□□ -1.85
MSH2YOL090W LSM5P40089 93 aaKnown RBP3.5□□□□□ -1.85
MSH2YOL090W YML6P51998 286 aa3.5□□□□□ -1.85
MSH2YOL090W ARE2P53629 642 aaKnown RBP3.5□□□□□ -1.85
MSH2YOL090W MRPL19P53875 158 aa3.5□□□□□ -1.85
MSH2YOL090W UTP5Q04177 643 aaKnown RBP3.5□□□□□ -1.85
MSH2YOL090W UTP21Q06078 939 aaPredicted RBP3.5□□□□□ -1.85
MSH2YOL090W TRM8Q12009 286 aa3.5□□□□□ -1.85
MSH2YOL090W YPR027CQ12079 277 aa3.5□□□□□ -1.85
MSH2YOL090W GLO4Q12320 285 aa3.5□□□□□ -1.85
MSH2YOL090W RVB2Q12464 471 aaKnown RBP3.5□□□□□ -1.85
MSH2YOL090W ENT1Q12518 454 aa3.5□□□□□ -1.85
MSH2YOL090W GUK1P15454 187 aaKnown RBP3.5□□□□□ -1.85
MSH2YOL090W NCP1P16603 691 aaKnown RBP3.5□□□□□ -1.85
MSH2YOL090W RET1P22276 1149 aaKnown RBP3.5□□□□□ -1.85
MSH2YOL090W NEM1P38757 446 aa3.5□□□□□ -1.85
MSH2YOL090W YEL068CP39977 110 aa3.5□□□□□ -1.85
MSH2YOL090W NCE103P53615 221 aa3.5□□□□□ -1.85
MSH2YOL090W LCD1Q04377 747 aa3.5□□□□□ -1.85
MSH2YOL090W OMS1Q06668 471 aa3.5□□□□□ -1.85
MSH2YOL090W HFI1Q12060 488 aa3.5□□□□□ -1.85
MSH2YOL090W TCB1Q12466 1186 aa3.5□□□□□ -1.85
MSH2YOL090W VMR1P38735 1592 aa3.5□□□□□ -1.85
MSH2YOL090W SPT7P35177 1332 aa3.5□□□□□ -1.85
MSH2YOL090W PER1P25625 357 aa3.49□□□□□ -1.85
MSH2YOL090W UGA3P26370 528 aa3.49□□□□□ -1.85
MSH2YOL090W PXA2P34230 853 aa3.49□□□□□ -1.85
MSH2YOL090W IMA5P40884 581 aa3.49□□□□□ -1.85
MSH2YOL090W COG8Q04632 607 aa3.49□□□□□ -1.85
MSH2YOL090W DUS3Q06053 668 aaKnown RBP3.49□□□□□ -1.85
MSH2YOL090W ENA1P13587 1091 aa3.49□□□□□ -1.85
MSH2YOL090W CDC60P26637 1090 aaKnown RBP3.49□□□□□ -1.85
MSH2YOL090W CMK1P27466 446 aaKnown RBP3.49□□□□□ -1.85
MSH2YOL090W MTH1P35198 433 aa3.49□□□□□ -1.85
MSH2YOL090W ADD66P36040 267 aa3.49□□□□□ -1.85
MSH2YOL090W RGA1P39083 1007 aa3.49□□□□□ -1.85
MSH2YOL090W DLD3P39976 496 aaKnown RBP3.49□□□□□ -1.85
MSH2YOL090W AXL1P40851 1208 aa3.49□□□□□ -1.85
MSH2YOL090W HXT16P47185 567 aa3.49□□□□□ -1.85
MSH2YOL090W ENA2Q01896 1091 aa3.49□□□□□ -1.85
MSH2YOL090W MET7Q08645 548 aa3.49□□□□□ -1.85
MSH2YOL090W TAH18Q12181 623 aa3.49□□□□□ -1.85
MSH2YOL090W ENA5Q12691 1091 aa3.49□□□□□ -1.85
MSH2YOL090W FUR1P18562 216 aaKnown RBP3.49□□□□□ -1.85
MSH2YOL090W OAF3P36023 863 aa3.49□□□□□ -1.85
MSH2YOL090W NCL1P38205 684 aaKnown RBP3.49□□□□□ -1.85
MSH2YOL090W YBR287WP38355 427 aa3.49□□□□□ -1.85
MSH2YOL090W LAM1P38851 1228 aa3.49□□□□□ -1.85
MSH2YOL090W YHR218WP38899 603 aa3.49□□□□□ -1.85
MSH2YOL090W SLS1P42900 643 aa3.49□□□□□ -1.85
MSH2YOL090W UBC9P50623 157 aaPredicted RBP3.49□□□□□ -1.85
MSH2YOL090W SYF1Q04048 859 aaPredicted RBP3.49□□□□□ -1.85
MSH2YOL090W GSF2Q04697 403 aaKnown RBP3.49□□□□□ -1.85
MSH2YOL090W ARP7Q12406 477 aa3.49□□□□□ -1.85
MSH2YOL090W APM4Q99186 491 aa3.49□□□□□ -1.85
MSH2YOL090W NUP188P52593 1655 aaKnown RBP3.48□□□□□ -1.85
MSH2YOL090W MSH1P25846 959 aa3.48□□□□□ -1.85
MSH2YOL090W NPL6P32832 435 aa3.48□□□□□ -1.85
MSH2YOL090W ORC2P32833 620 aa3.48□□□□□ -1.85
MSH2YOL090W YKL151CP36059 337 aa3.48□□□□□ -1.85
MSH2YOL090W ALG3P38179 458 aa3.48□□□□□ -1.85
MSH2YOL090W CCZ1P38273 704 aa3.48□□□□□ -1.85
MSH2YOL090W PNT1P38969 423 aa3.48□□□□□ -1.85
MSH2YOL090W MXR1P40029 184 aa3.48□□□□□ -1.85
MSH2YOL090W YER156CP40093 338 aaKnown RBP3.48□□□□□ -1.85
MSH2YOL090W LTP1P40347 161 aa3.48□□□□□ -1.85
MSH2YOL090W SAE2P46946 345 aa3.48□□□□□ -1.85
MSH2YOL090W VPS53P47061 822 aa3.48□□□□□ -1.85
MSH2YOL090W ASK10P48361 1146 aa3.48□□□□□ -1.85
MSH2YOL090W ENV11P53246 860 aa3.48□□□□□ -1.85
MSH2YOL090W LAP2Q10740 671 aa3.48□□□□□ -1.85
MSH2YOL090W ENV7Q12003 364 aa3.48□□□□□ -1.85
MSH2YOL090W TY1A-BLQ12266 440 aa3.48□□□□□ -1.85
MSH2YOL090W SMC6Q12749 1114 aa3.48□□□□□ -1.85
MSH2YOL090W STH1P32597 1359 aa3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms