RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W RPO26P20435 155 aa6.34□□□□□ -1.4
ATG4YNL223W RNR1P21524 888 aaKnown RBP6.34□□□□□ -1.4
ATG4YNL223W AFT1P22149 690 aa6.34□□□□□ -1.4
ATG4YNL223W MSS51P32335 436 aa6.34□□□□□ -1.4
ATG4YNL223W SKG6P32900 734 aaPredicted RBP6.34□□□□□ -1.4
ATG4YNL223W DCW1P36091 449 aa6.34□□□□□ -1.4
ATG4YNL223W RCK2P38623 610 aa6.34□□□□□ -1.4
ATG4YNL223W PSY2P40164 858 aa6.34□□□□□ -1.4
ATG4YNL223W YTA12P40341 825 aa6.34□□□□□ -1.4
ATG4YNL223W PHO86P46956 311 aa6.34□□□□□ -1.4
ATG4YNL223W CWC22P53333 577 aaKnown RBP6.34□□□□□ -1.4
ATG4YNL223W CUS1Q02554 436 aaPredicted RBP6.34□□□□□ -1.4
ATG4YNL223W STE20Q03497 939 aaKnown RBP6.34□□□□□ -1.4
ATG4YNL223W SUT2Q12286 268 aa6.34□□□□□ -1.4
ATG4YNL223W HTA1P04911 132 aaKnown RBP6.33□□□□□ -1.4
ATG4YNL223W HTA2P04912 132 aa6.33□□□□□ -1.4
ATG4YNL223W RPS3P05750 240 aaKnown RBP6.33□□□□□ -1.4
ATG4YNL223W ASP3-2P0CX77 362 aa6.33□□□□□ -1.4
ATG4YNL223W ASP3-3P0CX78 362 aa6.33□□□□□ -1.4
ATG4YNL223W ASP3-4P0CX79 362 aa6.33□□□□□ -1.4
ATG4YNL223W ASP3-1P0CZ17 362 aa6.33□□□□□ -1.4
ATG4YNL223W RPL4AP10664 362 aaKnown RBP6.33□□□□□ -1.4
ATG4YNL223W COX11P19516 300 aaKnown RBP6.33□□□□□ -1.4
ATG4YNL223W RRT12P25381 491 aa6.33□□□□□ -1.4
ATG4YNL223W CNS1P33313 385 aa6.33□□□□□ -1.4
ATG4YNL223W DYS1P38791 387 aa6.33□□□□□ -1.4
ATG4YNL223W MAD1P40957 749 aa6.33□□□□□ -1.4
ATG4YNL223W YJR107WP47145 328 aa6.33□□□□□ -1.4
ATG4YNL223W SGM1P47166 707 aa6.33□□□□□ -1.4
ATG4YNL223W RPL4BP49626 362 aaKnown RBP6.33□□□□□ -1.4
ATG4YNL223W DRN1P53255 507 aaKnown RBP6.33□□□□□ -1.4
ATG4YNL223W DUS1P53759 423 aaKnown RBP6.33□□□□□ -1.4
ATG4YNL223W JJJ1P53863 590 aa6.33□□□□□ -1.4
ATG4YNL223W YDR222WQ04925 415 aa6.33□□□□□ -1.4
ATG4YNL223W ABP140Q08641 628 aaKnown RBP6.33□□□□□ -1.4
ATG4YNL223W SGT2Q12118 346 aaKnown RBP6.33□□□□□ -1.4
ATG4YNL223W ECM3Q99252 613 aa6.33□□□□□ -1.4
ATG4YNL223W GLN3P18494 730 aa6.32□□□□□ -1.4
ATG4YNL223W RTG1P32607 177 aa6.32□□□□□ -1.4
ATG4YNL223W GCG1P32656 232 aaKnown RBP6.32□□□□□ -1.4
ATG4YNL223W RRN6P32786 894 aa6.32□□□□□ -1.4
ATG4YNL223W PTC4P38089 393 aa6.32□□□□□ -1.4
ATG4YNL223W NCL1P38205 684 aaKnown RBP6.32□□□□□ -1.4
ATG4YNL223W HIS2P38635 335 aa6.32□□□□□ -1.4
ATG4YNL223W TDA3P38758 523 aa6.32□□□□□ -1.4
ATG4YNL223W AFG3P39925 761 aa6.32□□□□□ -1.4
ATG4YNL223W PSF2P40359 213 aa6.32□□□□□ -1.4
ATG4YNL223W SBE2P42223 864 aaKnown RBP6.32□□□□□ -1.4
ATG4YNL223W ZAP1P47043 880 aa6.32□□□□□ -1.4
ATG4YNL223W BRO1P48582 844 aa6.32□□□□□ -1.4
ATG4YNL223W NCS6P53088 359 aa6.32□□□□□ -1.4
ATG4YNL223W YGR111WP53265 400 aa6.32□□□□□ -1.4
ATG4YNL223W YNL035CP53962 389 aaKnown RBP6.32□□□□□ -1.4
ATG4YNL223W URH1Q04179 340 aa6.32□□□□□ -1.4
ATG4YNL223W VTI1Q04338 217 aa6.32□□□□□ -1.4
ATG4YNL223W NOP6Q07623 225 aaKnown RBP6.32□□□□□ -1.4
ATG4YNL223W NUR1Q12066 484 aa6.32□□□□□ -1.4
ATG4YNL223W RTP1Q12751 981 aa6.32□□□□□ -1.4
ATG4YNL223W RIF1P29539 1916 aa6.32□□□□□ -1.4
ATG4YNL223W YLR462WO13556 202 aa6.31□□□□□ -1.4
ATG4YNL223W PRR1P28708 518 aa6.31□□□□□ -1.4
ATG4YNL223W RRT2P38332 387 aa6.31□□□□□ -1.4
ATG4YNL223W YHL049CP38722 271 aa6.31□□□□□ -1.4
ATG4YNL223W SPC72P39723 622 aa6.31□□□□□ -1.4
ATG4YNL223W YEL075CP39972 122 aa6.31□□□□□ -1.4
ATG4YNL223W LCP5P40079 357 aaPredicted RBP6.31□□□□□ -1.4
ATG4YNL223W YER189WP40104 122 aa6.31□□□□□ -1.4
ATG4YNL223W AIM21P40563 679 aa6.31□□□□□ -1.4
ATG4YNL223W YFL064CP43540 174 aa6.31□□□□□ -1.4
ATG4YNL223W PUS2P53167 370 aa6.31□□□□□ -1.4
ATG4YNL223W DOT1Q04089 582 aaKnown RBP6.31□□□□□ -1.4
ATG4YNL223W YDR278CQ05612 105 aa6.31□□□□□ -1.4
ATG4YNL223W ECI1Q05871 280 aa6.31□□□□□ -1.4
ATG4YNL223W SPO21Q12411 609 aa6.31□□□□□ -1.4
ATG4YNL223W YOR131CQ12486 218 aa6.31□□□□□ -1.4
ATG4YNL223W YBL111CQ3E7Y5 667 aa6.31□□□□□ -1.4
ATG4YNL223W LAA1P39526 2014 aa6.31□□□□□ -1.4
ATG4YNL223W BI2P03873 423 aa6.3□□□□□ -1.4
ATG4YNL223W BI4P03879 638 aa6.3□□□□□ -1.4
ATG4YNL223W ADE2P21264 571 aaKnown RBP6.3□□□□□ -1.4
ATG4YNL223W GUT1P32190 709 aa6.3□□□□□ -1.4
ATG4YNL223W RPT1P33299 467 aaKnown RBP6.3□□□□□ -1.4
ATG4YNL223W DUR3P33413 735 aa6.3□□□□□ -1.4
ATG4YNL223W TRM2P33753 639 aa6.3□□□□□ -1.4
ATG4YNL223W SAH1P39954 449 aaKnown RBP6.3□□□□□ -1.4
ATG4YNL223W RPC17P47076 161 aa6.3□□□□□ -1.4
ATG4YNL223W ATH1P48016 1211 aa6.3□□□□□ -1.4
ATG4YNL223W MUK1Q02866 612 aa6.3□□□□□ -1.4
ATG4YNL223W MDM20Q12387 796 aaKnown RBP6.3□□□□□ -1.4
ATG4YNL223W ZRT2Q12436 422 aa6.3□□□□□ -1.4
ATG4YNL223W BI3Q9ZZW7 517 aa6.3□□□□□ -1.4
ATG4YNL223W ADE4P04046 510 aaKnown RBP6.29□□□□□ -1.4
ATG4YNL223W GAL10P04397 699 aa6.29□□□□□ -1.4
ATG4YNL223W YER152CP10356 443 aa6.29□□□□□ -1.4
ATG4YNL223W DBF4P32325 704 aa6.29□□□□□ -1.4
ATG4YNL223W YHR054CP38780 354 aa6.29□□□□□ -1.4
ATG4YNL223W KAP123P40069 1113 aaKnown RBP6.29□□□□□ -1.4
ATG4YNL223W YER186CP40101 306 aa6.29□□□□□ -1.4
ATG4YNL223W ASG1P40467 964 aa6.29□□□□□ -1.4
ATG4YNL223W MIC19P43594 170 aa6.29□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms