RNA–Protein interactions for RNA: YMR296C

LCB1, Transcript of Component of serine palmitoyltransferase, yeastyeast

Gene LCB1, Length 1,677 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB1YMR296C ORC5P50874 479 aa12.21□□□□□ -0.45
LCB1YMR296C TRS130Q03660 1102 aa12.21□□□□□ -0.45
LCB1YMR296C URH1Q04179 340 aa12.21□□□□□ -0.45
LCB1YMR296C CSR1Q06705 408 aaKnown RBP12.21□□□□□ -0.45
LCB1YMR296C CDC53Q12018 815 aaKnown RBP12.21□□□□□ -0.45
LCB1YMR296C VPS41P38959 992 aa12.2□□□□□ -0.46
LCB1YMR296C YDR034W-BQ6Q5X2 51 aa12.2□□□□□ -0.46
LCB1YMR296C QCR6P00127 147 aa12.19□□□□□ -0.46
LCB1YMR296C MSD1P15179 658 aaKnown RBP12.19□□□□□ -0.46
LCB1YMR296C SKG6P32900 734 aaPredicted RBP12.19□□□□□ -0.46
LCB1YMR296C RPT1P33299 467 aaKnown RBP12.19□□□□□ -0.46
LCB1YMR296C MAD1P40957 749 aa12.19□□□□□ -0.46
LCB1YMR296C FIG4P42837 879 aa12.19□□□□□ -0.46
LCB1YMR296C RPS0BP46654 252 aaKnown RBP12.19□□□□□ -0.46
LCB1YMR296C SFH1Q06168 426 aa12.19□□□□□ -0.46
LCB1YMR296C YLR455WQ06188 304 aa12.19□□□□□ -0.46
LCB1YMR296C RGD1P38339 666 aa12.19□□□□□ -0.46
LCB1YMR296C ESL1P40456 1118 aa12.19□□□□□ -0.46
LCB1YMR296C KAP114P53067 1004 aa12.19□□□□□ -0.46
LCB1YMR296C UBP3Q01477 912 aaKnown RBP RIP-Chip data12.19□□□□□ -0.46not detected
LCB1YMR296C VTI1Q04338 217 aa12.19□□□□□ -0.46
LCB1YMR296C CHS2P14180 963 aa12.18□□□□□ -0.46
LCB1YMR296C ALT2P52892 507 aa12.18□□□□□ -0.46
LCB1YMR296C SHE10P53075 577 aa12.18□□□□□ -0.46
LCB1YMR296C YGR021WP53212 290 aa12.18□□□□□ -0.46
LCB1YMR296C YOR022CQ12204 715 aa12.18□□□□□ -0.46
LCB1YMR296C CDC8P00572 216 aa12.17□□□□□ -0.46
LCB1YMR296C GCG1P32656 232 aaKnown RBP12.17□□□□□ -0.46
LCB1YMR296C MRS2Q01926 470 aa12.17□□□□□ -0.46
LCB1YMR296C PNG1Q02890 363 aa12.17□□□□□ -0.46
LCB1YMR296C RAD1P06777 1100 aa12.16□□□□□ -0.46
LCB1YMR296C NFU1P32860 256 aa12.16□□□□□ -0.46
LCB1YMR296C CSE2P33308 149 aa12.16□□□□□ -0.46
LCB1YMR296C TDA3P38758 523 aa12.16□□□□□ -0.46
LCB1YMR296C FMP10P40098 244 aa12.16□□□□□ -0.46
LCB1YMR296C HXT8P40886 569 aa12.16□□□□□ -0.46
LCB1YMR296C ASN1P49089 572 aaKnown RBP12.16□□□□□ -0.46
LCB1YMR296C TIM8P57744 87 aa12.16□□□□□ -0.46
LCB1YMR296C TSR1Q07381 788 aaKnown RBP12.16□□□□□ -0.46
LCB1YMR296C SHS1Q07657 551 aa12.16□□□□□ -0.46
LCB1YMR296C RPL4AP10664 362 aaKnown RBP12.16□□□□□ -0.46
LCB1YMR296C MMS4P38257 691 aa12.16□□□□□ -0.46
LCB1YMR296C YER186CP40101 306 aa12.16□□□□□ -0.46
LCB1YMR296C COS5P47187 383 aa12.16□□□□□ -0.46
LCB1YMR296C ISM1P48526 1002 aa12.16□□□□□ -0.46
LCB1YMR296C RPL4BP49626 362 aaKnown RBP12.16□□□□□ -0.46
LCB1YMR296C MET13P53128 600 aa12.16□□□□□ -0.46
LCB1YMR296C RAD54P32863 898 aa12.15□□□□□ -0.46
LCB1YMR296C ESBP6P53918 673 aa12.15□□□□□ -0.46
LCB1YMR296C YML082WQ04533 649 aaKnown RBP12.15□□□□□ -0.46
LCB1YMR296C RLP24Q07915 199 aaKnown RBP12.15□□□□□ -0.46
LCB1YMR296C YOR223WQ12015 292 aa12.15□□□□□ -0.46
LCB1YMR296C PRC1P00729 532 aa12.14□□□□□ -0.47
LCB1YMR296C RSA4P25382 515 aaKnown RBP12.14□□□□□ -0.47
LCB1YMR296C ADK2P26364 225 aa12.14□□□□□ -0.47
LCB1YMR296C MUD1P32605 298 aaKnown RBP12.14□□□□□ -0.47
LCB1YMR296C YKL050CP35736 922 aa12.14□□□□□ -0.47
LCB1YMR296C BCH2P36122 765 aa12.14□□□□□ -0.47
LCB1YMR296C TRZ1P36159 838 aaPredicted RBP12.14□□□□□ -0.47
LCB1YMR296C APN2P38207 520 aa12.14□□□□□ -0.47
LCB1YMR296C ULI1P43604 169 aa12.14□□□□□ -0.47
LCB1YMR296C SCD6P45978 349 aaKnown RBP RIP-Chip data12.14□□□□□ -0.47not detected
LCB1YMR296C YGL140CP53120 1219 aa12.14□□□□□ -0.47
LCB1YMR296C OMS1Q06668 471 aa12.14□□□□□ -0.47
LCB1YMR296C SLX4Q12098 748 aa12.14□□□□□ -0.47
LCB1YMR296C ZRT2Q12436 422 aa12.14□□□□□ -0.47
LCB1YMR296C SPT2P06843 333 aaPredicted RBP12.13□□□□□ -0.47
LCB1YMR296C PRR1P28708 518 aa12.13□□□□□ -0.47
LCB1YMR296C DEP1P31385 405 aa12.13□□□□□ -0.47
LCB1YMR296C CDC11P32458 415 aa12.13□□□□□ -0.47
LCB1YMR296C MRPL7P36519 292 aa12.13□□□□□ -0.47
LCB1YMR296C GDT1P38301 280 aaPredicted RBP12.13□□□□□ -0.47
LCB1YMR296C RCK2P38623 610 aa12.13□□□□□ -0.47
LCB1YMR296C HSH155P49955 971 aaKnown RBP12.13□□□□□ -0.47
LCB1YMR296C INP52P50942 1183 aa12.13□□□□□ -0.47
LCB1YMR296C ALG11P53954 548 aaKnown RBP12.13□□□□□ -0.47
LCB1YMR296C URK1P27515 501 aa12.13□□□□□ -0.47
LCB1YMR296C LAS1P36146 502 aaPredicted RBP12.13□□□□□ -0.47
LCB1YMR296C NPP2P39997 493 aa12.13□□□□□ -0.47
LCB1YMR296C SYH1Q02875 849 aaKnown RBP12.13□□□□□ -0.47
LCB1YMR296C YMR018WQ04364 514 aa12.13□□□□□ -0.47
LCB1YMR296C YDR278CQ05612 105 aa12.13□□□□□ -0.47
LCB1YMR296C ECI1Q05871 280 aa12.13□□□□□ -0.47
LCB1YMR296C RUD3Q12234 484 aaKnown RBP12.13□□□□□ -0.47
LCB1YMR296C YLR422WQ06409 1932 aa12.12□□□□□ -0.47
LCB1YMR296C VMA1P17255 1071 aaKnown RBP12.12□□□□□ -0.47
LCB1YMR296C RFS1P38234 210 aaKnown RBP12.12□□□□□ -0.47
LCB1YMR296C RPC17P47076 161 aa12.12□□□□□ -0.47
LCB1YMR296C YJR079WP47126 109 aa12.12□□□□□ -0.47
LCB1YMR296C HEH2Q03281 663 aa12.12□□□□□ -0.47
LCB1YMR296C DON1Q05610 365 aa12.12□□□□□ -0.47
LCB1YMR296C YDL206WQ12424 762 aa12.12□□□□□ -0.47
LCB1YMR296C IDI1P15496 288 aa12.11□□□□□ -0.47
LCB1YMR296C KIP1P28742 1111 aa12.11□□□□□ -0.47
LCB1YMR296C BIO2P32451 375 aa12.11□□□□□ -0.47
LCB1YMR296C EXO5P38289 585 aa12.11□□□□□ -0.47
LCB1YMR296C YNL320WP42840 284 aa12.11□□□□□ -0.47
LCB1YMR296C YFL052WP43551 465 aa12.11□□□□□ -0.47
LCB1YMR296C BRO1P48582 844 aa12.11□□□□□ -0.47
LCB1YMR296C SPP1Q03012 353 aa12.11□□□□□ -0.47
Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms