RNA–Protein interactions for RNA: YMR046C

YMR046C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeast

Gene YMR046C, Length 1,323 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YMR046C	YMR046C	MSE1	P48525	536 aa		4.28	□□□□□ -1.72
YMR046C	YMR046C	SLI1	P53304	468 aa		4.28	□□□□□ -1.72
YMR046C	YMR046C	ENB1	Q08299	606 aa		4.28	□□□□□ -1.72
YMR046C	YMR046C	GPR1	Q12361	961 aa		4.28	□□□□□ -1.72
YMR046C	YMR046C	TRM11	Q12463	433 aa		4.28	□□□□□ -1.72
YMR046C	YMR046C	YLR415C	O13578	112 aa		4.27	□□□□□ -1.73
YMR046C	YMR046C	PFK1	P16861	987 aa	Known RBP	4.27	□□□□□ -1.73
YMR046C	YMR046C	PRP19	P32523	503 aa	Known RBP	4.27	□□□□□ -1.73
YMR046C	YMR046C	CTF13	P35203	478 aa		4.27	□□□□□ -1.73
YMR046C	YMR046C	YKR018C	P36114	725 aa		4.27	□□□□□ -1.73
YMR046C	YMR046C	PHO23	P50947	330 aa		4.27	□□□□□ -1.73
YMR046C	YMR046C	ORC4	P54791	529 aa		4.27	□□□□□ -1.73
YMR046C	YMR046C	MTQ2	Q03920	221 aa	Predicted RBP	4.27	□□□□□ -1.73
YMR046C	YMR046C	PMA1	P05030	918 aa	Known RBP	4.26	□□□□□ -1.73
YMR046C	YMR046C	MIP6	P38760	659 aa	Known RBP	4.26	□□□□□ -1.73
YMR046C	YMR046C	CKB2	P38930	258 aa		4.26	□□□□□ -1.73
YMR046C	YMR046C	PCL10	P53124	433 aa		4.26	□□□□□ -1.73
YMR046C	YMR046C	GPG1	P53130	126 aa		4.26	□□□□□ -1.73
YMR046C	YMR046C	YBP2	P53169	641 aa		4.26	□□□□□ -1.73
YMR046C	YMR046C	FAP7	Q12055	197 aa	Predicted RBP	4.26	□□□□□ -1.73
YMR046C	YMR046C	HCM1	P25364	564 aa		4.25	□□□□□ -1.73
YMR046C	YMR046C	MNN4	P36044	1178 aa		4.25	□□□□□ -1.73
YMR046C	YMR046C	FKH2	P41813	862 aa		4.25	□□□□□ -1.73
YMR046C	YMR046C	MRPS35	P53292	345 aa		4.25	□□□□□ -1.73
YMR046C	YMR046C	ERG5	P54781	538 aa		4.25	□□□□□ -1.73
YMR046C	YMR046C	NRG1	Q03125	231 aa		4.25	□□□□□ -1.73
YMR046C	YMR046C	IOC4	Q04213	475 aa		4.25	□□□□□ -1.73
YMR046C	YMR046C	TRP4	P07285	380 aa	Predicted RBP	4.24	□□□□□ -1.73
YMR046C	YMR046C	GPP1	P41277	250 aa	Known RBP	4.24	□□□□□ -1.73
YMR046C	YMR046C	PRP31	P49704	494 aa	Predicted RBP	4.24	□□□□□ -1.73
YMR046C	YMR046C	ARP4	P80428	489 aa		4.24	□□□□□ -1.73
YMR046C	YMR046C	HFD1	Q04458	532 aa		4.24	□□□□□ -1.73
YMR046C	YMR046C	YBR259W	P38338	688 aa		4.23	□□□□□ -1.73
YMR046C	YMR046C	SIC1	P38634	284 aa		4.23	□□□□□ -1.73
YMR046C	YMR046C	TDA3	P38758	523 aa		4.23	□□□□□ -1.73
YMR046C	YMR046C	LEE1	Q02799	301 aa	Known RBP	4.23	□□□□□ -1.73
YMR046C	YMR046C	TGL5	Q12043	749 aa		4.23	□□□□□ -1.73
YMR046C	YMR046C	DCS2	Q12123	353 aa		4.23	□□□□□ -1.73
YMR046C	YMR046C	NTO1	Q12311	748 aa		4.23	□□□□□ -1.73
YMR046C	YMR046C	ADE2	P21264	571 aa	Known RBP	4.22	□□□□□ -1.73
YMR046C	YMR046C	RET2	P43621	546 aa		4.22	□□□□□ -1.73
YMR046C	YMR046C	YGR153W	P48238	217 aa		4.22	□□□□□ -1.73
YMR046C	YMR046C	BUL1	P48524	976 aa		4.22	□□□□□ -1.73
YMR046C	YMR046C	BRE5	P53741	515 aa	Known RBP	4.22	□□□□□ -1.73
YMR046C	YMR046C	AIM39	Q08223	395 aa		4.22	□□□□□ -1.73
YMR046C	YMR046C	YTM1	Q12024	460 aa	Predicted RBP	4.22	□□□□□ -1.73
YMR046C	YMR046C	MET3	P08536	511 aa		4.21	□□□□□ -1.73
YMR046C	YMR046C	HRR25	P29295	494 aa	Known RBP	4.21	□□□□□ -1.73
YMR046C	YMR046C	EFT1	P32324	842 aa	Known RBP	4.21	□□□□□ -1.73
YMR046C	YMR046C	DEF1	P35732	738 aa	Known RBP	4.21	□□□□□ -1.73
YMR046C	YMR046C	SSZ1	P38788	538 aa	Known RBP	4.21	□□□□□ -1.73
YMR046C	YMR046C	GZF3	P42944	551 aa	Known RBP	4.21	□□□□□ -1.73
YMR046C	YMR046C	SUN4	P53616	420 aa		4.21	□□□□□ -1.73
YMR046C	YMR046C	ARG5,6	Q01217	863 aa		4.21	□□□□□ -1.73
YMR046C	YMR046C	DLT1	Q04216	342 aa		4.21	□□□□□ -1.73
YMR046C	YMR046C	SSB1	P11484	613 aa	Known RBP	4.21	□□□□□ -1.74
YMR046C	YMR046C	ERG4	P25340	473 aa		4.21	□□□□□ -1.74
YMR046C	YMR046C	APL2	P36000	726 aa	Predicted RBP	4.21	□□□□□ -1.74
YMR046C	YMR046C	MAL31	P38156	614 aa		4.21	□□□□□ -1.74
YMR046C	YMR046C	APN2	P38207	520 aa		4.21	□□□□□ -1.74
YMR046C	YMR046C	YHR112C	P38716	378 aa		4.21	□□□□□ -1.74
YMR046C	YMR046C	ECM1	P39715	212 aa		4.21	□□□□□ -1.74
YMR046C	YMR046C	OAF1	P39720	1047 aa	Predicted RBP	4.21	□□□□□ -1.74
YMR046C	YMR046C	SSB2	P40150	613 aa	Known RBP	4.21	□□□□□ -1.74
YMR046C	YMR046C	ELO3	P40319	345 aa		4.21	□□□□□ -1.74
YMR046C	YMR046C	CCT5	P40413	562 aa	Known RBP	4.21	□□□□□ -1.74
YMR046C	YMR046C	YJR039W	P47107	1121 aa		4.21	□□□□□ -1.74
YMR046C	YMR046C	BFA1	P47113	574 aa		4.21	□□□□□ -1.74
YMR046C	YMR046C	MUP1	P50276	574 aa		4.21	□□□□□ -1.74
YMR046C	YMR046C	GPD1	Q00055	391 aa	Known RBP	4.21	□□□□□ -1.74
YMR046C	YMR046C	TRM13	Q12383	476 aa		4.21	□□□□□ -1.74
YMR046C	YMR046C	CAF20	P12962	161 aa	Known RBP	4.2	□□□□□ -1.74
YMR046C	YMR046C	PMI40	P29952	429 aa	Known RBP	4.2	□□□□□ -1.74
YMR046C	YMR046C	YKR075C	P36155	307 aa		4.2	□□□□□ -1.74
YMR046C	YMR046C	APT2	P36973	181 aa		4.2	□□□□□ -1.74
YMR046C	YMR046C	AKL1	P38080	1108 aa	Known RBP	4.2	□□□□□ -1.74
YMR046C	YMR046C	YHR202W	P38887	602 aa		4.2	□□□□□ -1.74
YMR046C	YMR046C	NUG1	P40010	520 aa	Known RBP	4.2	□□□□□ -1.74
YMR046C	YMR046C	MNN11	P46985	422 aa	Known RBP	4.2	□□□□□ -1.74
YMR046C	YMR046C	SET2	P46995	733 aa	Known RBP	4.2	□□□□□ -1.74
YMR046C	YMR046C	AMA1	P50082	593 aa		4.2	□□□□□ -1.74
YMR046C	YMR046C	TEX1	P53851	422 aa	Known RBP	4.2	□□□□□ -1.74
YMR046C	YMR046C	CTF4	Q01454	927 aa		4.2	□□□□□ -1.74
YMR046C	YMR046C	ECM9	Q02202	377 aa		4.2	□□□□□ -1.74
YMR046C	YMR046C	GAD1	Q04792	585 aa		4.2	□□□□□ -1.74
YMR046C	YMR046C	MCM21	Q06675	368 aa		4.2	□□□□□ -1.74
YMR046C	YMR046C	TMA17	Q12513	150 aa		4.2	□□□□□ -1.74
YMR046C	YMR046C	TRZ1	P36159	838 aa	Predicted RBP	4.19	□□□□□ -1.74
YMR046C	YMR046C	KTR4	P38131	464 aa		4.19	□□□□□ -1.74
YMR046C	YMR046C	YIR042C	P40586	236 aa		4.19	□□□□□ -1.74
YMR046C	YMR046C	REC102	Q02721	264 aa		4.19	□□□□□ -1.74
YMR046C	YMR046C	RPS21B	Q3E754	87 aa	Known RBP	4.19	□□□□□ -1.74
YMR046C	YMR046C	PYC1	P11154	1178 aa	Known RBP	4.18	□□□□□ -1.74
YMR046C	YMR046C	ERG6	P25087	383 aa	Known RBP	4.18	□□□□□ -1.74
YMR046C	YMR046C	EUG1	P32474	517 aa		4.18	□□□□□ -1.74
YMR046C	YMR046C	DID4	P36108	232 aa		4.18	□□□□□ -1.74
YMR046C	YMR046C	YBR053C	P38235	358 aa		4.18	□□□□□ -1.74
YMR046C	YMR046C	SUL1	P38359	859 aa		4.18	□□□□□ -1.74
YMR046C	YMR046C	HXT6	P39003	570 aa	Known RBP	4.18	□□□□□ -1.74
YMR046C	YMR046C	HXT7	P39004	570 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms