RNA–Protein interactions for RNA: YMR004W

MVP1, Transcript of Protein required for sorting proteins to the vacuole, yeastyeast

Gene MVP1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MVP1YMR004W YAP1802P53309 568 aa2.56□□□□□ -2
MVP1YMR004W LRS4Q04087 347 aaKnown RBP2.56□□□□□ -2
MVP1YMR004W YDR514CQ04408 483 aa2.56□□□□□ -2
MVP1YMR004W TGL5Q12043 749 aa2.56□□□□□ -2
MVP1YMR004W PTP1P25044 335 aa2.55□□□□□ -2
MVP1YMR004W HIR1P32479 840 aa2.55□□□□□ -2
MVP1YMR004W YBR259WP38338 688 aa2.55□□□□□ -2
MVP1YMR004W PAC2P39937 518 aa2.55□□□□□ -2
MVP1YMR004W SHR5P41912 237 aa2.55□□□□□ -2
MVP1YMR004W YGR283CP53336 341 aaPredicted RBP2.55□□□□□ -2
MVP1YMR004W OSW1Q08692 278 aa2.55□□□□□ -2
MVP1YMR004W THI21Q08975 551 aa2.55□□□□□ -2
MVP1YMR004W CIT1P00890 479 aa2.54□□□□□ -2
MVP1YMR004W TOM70P07213 617 aaKnown RBP2.54□□□□□ -2
MVP1YMR004W RAD4P14736 754 aa2.54□□□□□ -2
MVP1YMR004W GAL11P19659 1081 aa2.54□□□□□ -2
MVP1YMR004W YCL002CP25565 263 aa2.54□□□□□ -2
MVP1YMR004W PAM1P37304 830 aaKnown RBP2.54□□□□□ -2
MVP1YMR004W REV7P38927 245 aa2.54□□□□□ -2
MVP1YMR004W BDH2P39713 417 aa2.54□□□□□ -2
MVP1YMR004W LTP1P40347 161 aa2.54□□□□□ -2
MVP1YMR004W TIM54P47045 478 aa2.54□□□□□ -2
MVP1YMR004W ZDS1P50111 915 aaKnown RBP2.54□□□□□ -2
MVP1YMR004W YBP2P53169 641 aa2.54□□□□□ -2
MVP1YMR004W MPS1P54199 764 aa2.54□□□□□ -2
MVP1YMR004W GAD1Q04792 585 aa2.54□□□□□ -2
MVP1YMR004W YOR131CQ12486 218 aa2.54□□□□□ -2
MVP1YMR004W GLG1P36143 616 aa2.53□□□□□ -2
MVP1YMR004W APT2P36973 181 aa2.53□□□□□ -2
MVP1YMR004W UBS1P38290 277 aa2.53□□□□□ -2
MVP1YMR004W ECM1P39715 212 aa2.53□□□□□ -2
MVP1YMR004W GYP8P43570 497 aa2.53□□□□□ -2
MVP1YMR004W ALG2P43636 503 aa2.53□□□□□ -2
MVP1YMR004W NET1P47035 1189 aa2.53□□□□□ -2
MVP1YMR004W YGR125WP53273 1036 aa2.53□□□□□ -2
MVP1YMR004W DIF1O13577 133 aa2.52□□□□□ -2.01
MVP1YMR004W SIR3P06701 978 aa2.52□□□□□ -2.01
MVP1YMR004W ARG2P40360 574 aa2.52□□□□□ -2.01
MVP1YMR004W BAP3P41815 604 aa2.52□□□□□ -2.01
MVP1YMR004W NNF1P47149 201 aa2.52□□□□□ -2.01
MVP1YMR004W MRK1P50873 501 aa2.52□□□□□ -2.01
MVP1YMR004W ZIP2P53061 704 aa2.52□□□□□ -2.01
MVP1YMR004W ATP25Q03153 612 aa2.52□□□□□ -2.01
MVP1YMR004W TAF8Q03750 510 aa2.52□□□□□ -2.01
MVP1YMR004W CCT3P39077 534 aaKnown RBP2.52□□□□□ -2.01
MVP1YMR004W RLP7P40693 322 aaKnown RBP2.52□□□□□ -2.01
MVP1YMR004W CTR1P49573 406 aa2.52□□□□□ -2.01
MVP1YMR004W TDA9Q04545 1251 aa2.52□□□□□ -2.01
MVP1YMR004W MET7Q08645 548 aa2.52□□□□□ -2.01
MVP1YMR004W GPR1Q12361 961 aa2.52□□□□□ -2.01
MVP1YMR004W YKL033W-AQ86ZR7 236 aa2.52□□□□□ -2.01
MVP1YMR004W YBR182C-AQ8TGU6 64 aa2.52□□□□□ -2.01
MVP1YMR004W PYC1P11154 1178 aaKnown RBP2.51□□□□□ -2.01
MVP1YMR004W CHZ1P40019 153 aaPredicted RBP2.51□□□□□ -2.01
MVP1YMR004W PRP31P49704 494 aaPredicted RBP2.51□□□□□ -2.01
MVP1YMR004W UBC9P50623 157 aaPredicted RBP2.51□□□□□ -2.01
MVP1YMR004W TEX1P53851 422 aaKnown RBP2.51□□□□□ -2.01
MVP1YMR004W CTK1Q03957 528 aaKnown RBP2.51□□□□□ -2.01
MVP1YMR004W CIR2Q08822 631 aa2.51□□□□□ -2.01
MVP1YMR004W YLR149CQ99296 730 aa2.51□□□□□ -2.01
MVP1YMR004W PHR1P05066 565 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
MVP1YMR004W ERG11P10614 530 aa2.5□□□□□ -2.01
MVP1YMR004W STI1P15705 589 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
MVP1YMR004W GSY1P23337 708 aa2.5□□□□□ -2.01
MVP1YMR004W ALY2P47029 1046 aa2.5□□□□□ -2.01
MVP1YMR004W FLC1Q08967 793 aa2.5□□□□□ -2.01
MVP1YMR004W CLF1Q12309 687 aaPredicted RBP2.5□□□□□ -2.01
MVP1YMR004W PGK1P00560 416 aaKnown RBP2.49□□□□□ -2.01
MVP1YMR004W MVD1P32377 396 aaKnown RBP2.49□□□□□ -2.01
MVP1YMR004W SPC29P33419 253 aa2.49□□□□□ -2.01
MVP1YMR004W RPN10P38886 268 aaKnown RBP2.49□□□□□ -2.01
MVP1YMR004W HRB1P38922 454 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
MVP1YMR004W XBP1P40489 647 aa2.49□□□□□ -2.01
MVP1YMR004W ORC4P54791 529 aa2.49□□□□□ -2.01
MVP1YMR004W SLK19Q08581 821 aaKnown RBP2.49□□□□□ -2.01
MVP1YMR004W PER1P25625 357 aa2.48□□□□□ -2.01
MVP1YMR004W CCR4P31384 837 aaKnown RBP2.48□□□□□ -2.01
MVP1YMR004W APL2P36000 726 aaPredicted RBP2.48□□□□□ -2.01
MVP1YMR004W BET3P36149 193 aa2.48□□□□□ -2.01
MVP1YMR004W TRZ1P36159 838 aaPredicted RBP2.48□□□□□ -2.01
MVP1YMR004W MUP3P38734 546 aa2.48□□□□□ -2.01
MVP1YMR004W SFB3P38810 929 aa2.48□□□□□ -2.01
MVP1YMR004W FMO1P38866 432 aa2.48□□□□□ -2.01
MVP1YMR004W MEP2P41948 499 aa2.48□□□□□ -2.01
MVP1YMR004W OSW7P43611 510 aa2.48□□□□□ -2.01
MVP1YMR004W HXT16P47185 567 aa2.48□□□□□ -2.01
MVP1YMR004W PAN2P53010 1115 aaPredicted RBP2.48□□□□□ -2.01
MVP1YMR004W ATG4P53867 494 aa2.48□□□□□ -2.01
MVP1YMR004W MCM21Q06675 368 aa2.48□□□□□ -2.01
MVP1YMR004W CDC53Q12018 815 aaKnown RBP2.48□□□□□ -2.01
MVP1YMR004W CAN1P04817 590 aa2.47□□□□□ -2.01
MVP1YMR004W CIT2P08679 460 aa2.47□□□□□ -2.01
MVP1YMR004W YHR020WP38708 688 aaKnown RBP2.47□□□□□ -2.01
MVP1YMR004W NUP60P39705 539 aa2.47□□□□□ -2.01
MVP1YMR004W YFL052WP43551 465 aa2.47□□□□□ -2.01
MVP1YMR004W ATG36P46983 293 aa2.47□□□□□ -2.01
MVP1YMR004W MTL1P53214 551 aa2.47□□□□□ -2.01
MVP1YMR004W ADE2P21264 571 aaKnown RBP2.47□□□□□ -2.01
MVP1YMR004W YHR112CP38716 378 aa2.47□□□□□ -2.01
MVP1YMR004W FHN1P53279 174 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms