RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W FUB1P25659 250 aa2.25□□□□□ -2.05
PRP39YML046W GMH1P36125 273 aa2.25□□□□□ -2.05
PRP39YML046W FMO1P38866 432 aa2.25□□□□□ -2.05
PRP39YML046W NOG2P53742 486 aaKnown RBP2.25□□□□□ -2.05
PRP39YML046W SHE9Q04172 456 aa2.25□□□□□ -2.05
PRP39YML046W KCC4P25389 1037 aa2.24□□□□□ -2.05
PRP39YML046W CCT5P40413 562 aaKnown RBP2.24□□□□□ -2.05
PRP39YML046W UGP1P32861 499 aaKnown RBP2.24□□□□□ -2.05
PRP39YML046W USV1Q12132 391 aa2.24□□□□□ -2.05
PRP39YML046W GPR1Q12361 961 aa2.24□□□□□ -2.05
PRP39YML046W ECM1P39715 212 aa2.23□□□□□ -2.05
PRP39YML046W MTR3P48240 250 aaPredicted RBP2.23□□□□□ -2.05
PRP39YML046W MTL1P53214 551 aa2.23□□□□□ -2.05
PRP39YML046W CTK1Q03957 528 aaKnown RBP2.23□□□□□ -2.05
PRP39YML046W TOP3P13099 656 aa2.22□□□□□ -2.05
PRP39YML046W HOT13P36078 116 aa2.22□□□□□ -2.05
PRP39YML046W NUP60P39705 539 aa2.22□□□□□ -2.05
PRP39YML046W HFD1Q04458 532 aa2.22□□□□□ -2.05
PRP39YML046W THR1P17423 357 aaKnown RBP2.22□□□□□ -2.05
PRP39YML046W YMC1P32331 307 aa2.22□□□□□ -2.05
PRP39YML046W MAF1P41910 395 aa2.22□□□□□ -2.05
PRP39YML046W DAL7P21826 554 aa2.21□□□□□ -2.06
PRP39YML046W SAP190P36123 1033 aa2.21□□□□□ -2.06
PRP39YML046W PMC1P38929 1173 aaPredicted RBP2.21□□□□□ -2.06
PRP39YML046W NIT3P49954 291 aa2.21□□□□□ -2.06
PRP39YML046W OYE2Q03558 400 aaKnown RBP2.21□□□□□ -2.06
PRP39YML046W ORM2Q06144 216 aa2.21□□□□□ -2.06
PRP39YML046W ENV7Q12003 364 aa2.21□□□□□ -2.06
PRP39YML046W ULA1Q12059 462 aa2.21□□□□□ -2.06
PRP39YML046W ECM32P32644 1121 aaKnown RBP2.2□□□□□ -2.06
PRP39YML046W MRP8P35719 219 aa2.2□□□□□ -2.06
PRP39YML046W PBY1P38254 753 aa2.2□□□□□ -2.06
PRP39YML046W LYS9P38999 446 aa2.2□□□□□ -2.06
PRP39YML046W SPC98P53540 846 aa2.2□□□□□ -2.06
PRP39YML046W CLF1Q12309 687 aaPredicted RBP2.2□□□□□ -2.06
PRP39YML046W EUG1P32474 517 aa2.2□□□□□ -2.06
PRP39YML046W SET3P36124 751 aa2.2□□□□□ -2.06
PRP39YML046W YMC2P38087 329 aa2.2□□□□□ -2.06
PRP39YML046W YBP2P53169 641 aa2.2□□□□□ -2.06
PRP39YML046W THI21Q08975 551 aa2.2□□□□□ -2.06
PRP39YML046W HBS1P32769 611 aaKnown RBP2.19□□□□□ -2.06
PRP39YML046W SCT1P32784 759 aa2.19□□□□□ -2.06
PRP39YML046W YPR071WQ12346 211 aa2.19□□□□□ -2.06
PRP39YML046W ZRT2Q12436 422 aa2.19□□□□□ -2.06
PRP39YML046W DED81P38707 554 aaKnown RBP2.18□□□□□ -2.06
PRP39YML046W MIT1P40002 666 aa2.18□□□□□ -2.06
PRP39YML046W ASN1P49089 572 aaKnown RBP2.18□□□□□ -2.06
PRP39YML046W PRP31P49704 494 aaPredicted RBP2.18□□□□□ -2.06
PRP39YML046W TAD1P53065 400 aa2.18□□□□□ -2.06
PRP39YML046W LRS4Q04087 347 aaKnown RBP2.18□□□□□ -2.06
PRP39YML046W PHO5P00635 467 aa2.18□□□□□ -2.06
PRP39YML046W PRP9P19736 530 aaKnown RBP2.18□□□□□ -2.06
PRP39YML046W YCL002CP25565 263 aa2.18□□□□□ -2.06
PRP39YML046W GCS1P35197 352 aa2.18□□□□□ -2.06
PRP39YML046W PXL1P36166 706 aa2.18□□□□□ -2.06
PRP39YML046W SET5P38890 526 aaKnown RBP2.18□□□□□ -2.06
PRP39YML046W SCW4P53334 386 aaKnown RBP2.18□□□□□ -2.06
PRP39YML046W CDC11P32458 415 aa2.17□□□□□ -2.06
PRP39YML046W YKL069WP36088 180 aa2.17□□□□□ -2.06
PRP39YML046W LSC1P53598 329 aaKnown RBP2.17□□□□□ -2.06
PRP39YML046W OPI10Q08202 246 aa2.17□□□□□ -2.06
PRP39YML046W TRZ1P36159 838 aaPredicted RBP2.16□□□□□ -2.06
PRP39YML046W RGC1Q06108 1083 aaKnown RBP2.16□□□□□ -2.06
PRP39YML046W IRC3Q06683 689 aa2.16□□□□□ -2.06
PRP39YML046W APL2P36000 726 aaPredicted RBP2.16□□□□□ -2.06
PRP39YML046W YBR284WP38150 797 aa2.16□□□□□ -2.06
PRP39YML046W YHR112CP38716 378 aa2.16□□□□□ -2.06
PRP39YML046W SPC97P38863 823 aa2.16□□□□□ -2.06
PRP39YML046W IRR1P40541 1150 aa2.16□□□□□ -2.06
PRP39YML046W YGR151CP53287 111 aa2.16□□□□□ -2.06
PRP39YML046W BMS1Q08965 1183 aaKnown RBP2.16□□□□□ -2.06
PRP39YML046W ABF1P14164 731 aa2.15□□□□□ -2.07
PRP39YML046W APT2P36973 181 aa2.15□□□□□ -2.07
PRP39YML046W ENP2P48234 707 aaKnown RBP2.15□□□□□ -2.07
PRP39YML046W CWC24P53769 259 aa2.15□□□□□ -2.07
PRP39YML046W YOR111WQ99210 232 aa2.15□□□□□ -2.07
PRP39YML046W HRP1Q99383 534 aaKnown RBP2.15□□□□□ -2.07
PRP39YML046W AI5_ALPHAQ9ZZX1 630 aa2.15□□□□□ -2.07
PRP39YML046W PRI2P20457 528 aa2.14□□□□□ -2.07
PRP39YML046W ADE2P21264 571 aaKnown RBP2.14□□□□□ -2.07
PRP39YML046W ASF1P32447 279 aa2.14□□□□□ -2.07
PRP39YML046W KSP1P38691 1029 aaKnown RBP2.14□□□□□ -2.07
PRP39YML046W CRP1P38845 465 aaKnown RBP2.14□□□□□ -2.07
PRP39YML046W PCI8P40512 444 aa2.14□□□□□ -2.07
PRP39YML046W ZIP2P53061 704 aa2.14□□□□□ -2.07
PRP39YML046W TPK2P06245 380 aa2.14□□□□□ -2.07
PRP39YML046W BEM3P32873 1128 aa2.14□□□□□ -2.07
PRP39YML046W ASK1P35734 292 aa2.14□□□□□ -2.07
PRP39YML046W PET10P36139 283 aa2.14□□□□□ -2.07
PRP39YML046W SHR5P41912 237 aa2.14□□□□□ -2.07
PRP39YML046W NUP53Q03790 475 aa2.14□□□□□ -2.07
PRP39YML046W MDM20Q12387 796 aaKnown RBP2.14□□□□□ -2.07
PRP39YML046W MSD1P15179 658 aaKnown RBP2.13□□□□□ -2.07
PRP39YML046W EMC3P36039 253 aa2.13□□□□□ -2.07
PRP39YML046W YAT2P40017 923 aa2.13□□□□□ -2.07
PRP39YML046W ERG13P54839 491 aaKnown RBP2.13□□□□□ -2.07
PRP39YML046W SCW10Q04951 389 aa2.13□□□□□ -2.07
PRP39YML046W MCM21Q06675 368 aa2.13□□□□□ -2.07
PRP39YML046W TSR4P25040 408 aa2.12□□□□□ -2.07
PRP39YML046W MNT3P40549 630 aa2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 78.5 ms