RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W ECM1P39715 212 aa5.09□□□□□ -1.59
SMD2YLR275W PRP31P49704 494 aaPredicted RBP5.09□□□□□ -1.59
SMD2YLR275W NHX1Q04121 633 aa5.09□□□□□ -1.59
SMD2YLR275W NTG2Q08214 380 aa5.09□□□□□ -1.59
SMD2YLR275W Q0142Q9ZZW4 58 aa5.09□□□□□ -1.59
SMD2YLR275W HSL7P38274 827 aa5.08□□□□□ -1.6
SMD2YLR275W ORC4P54791 529 aa5.08□□□□□ -1.6
SMD2YLR275W GAD1Q04792 585 aa5.08□□□□□ -1.6
SMD2YLR275W IRC13Q08630 104 aa5.08□□□□□ -1.6
SMD2YLR275W RAD18P10862 487 aa5.07□□□□□ -1.6
SMD2YLR275W MIH1P23748 554 aa5.07□□□□□ -1.6
SMD2YLR275W RRP14P36080 434 aaKnown RBP5.07□□□□□ -1.6
SMD2YLR275W YKR051WP36142 418 aa5.07□□□□□ -1.6
SMD2YLR275W YHL017WP38745 532 aa5.07□□□□□ -1.6
SMD2YLR275W HOS4P40480 1083 aa5.07□□□□□ -1.6
SMD2YLR275W TEX1P53851 422 aaKnown RBP5.07□□□□□ -1.6
SMD2YLR275W TMN2Q04562 672 aa5.07□□□□□ -1.6
SMD2YLR275W RPN7Q06103 429 aaKnown RBP5.07□□□□□ -1.6
SMD2YLR275W HBT1Q07653 1046 aaKnown RBP5.07□□□□□ -1.6
SMD2YLR275W PPG1P32838 368 aa5.06□□□□□ -1.6
SMD2YLR275W MIP6P38760 659 aaKnown RBP5.06□□□□□ -1.6
SMD2YLR275W RNH70P53331 553 aa5.06□□□□□ -1.6
SMD2YLR275W TAD3Q9URQ3 322 aa5.06□□□□□ -1.6
SMD2YLR275W ADE2P21264 571 aaKnown RBP5.05□□□□□ -1.6
SMD2YLR275W PCL2P25693 308 aa5.05□□□□□ -1.6
SMD2YLR275W HIS7P33734 552 aaKnown RBP5.05□□□□□ -1.6
SMD2YLR275W YEL1P34225 687 aa5.05□□□□□ -1.6
SMD2YLR275W APL2P36000 726 aaPredicted RBP5.05□□□□□ -1.6
SMD2YLR275W BCD1P38772 366 aa5.05□□□□□ -1.6
SMD2YLR275W DOT6P40059 670 aaKnown RBP5.05□□□□□ -1.6
SMD2YLR275W BAP3P41815 604 aa5.05□□□□□ -1.6
SMD2YLR275W ALG12P53730 551 aa5.05□□□□□ -1.6
SMD2YLR275W RIA1P53893 1110 aa5.05□□□□□ -1.6
SMD2YLR275W ARG5,6Q01217 863 aa5.05□□□□□ -1.6
SMD2YLR275W COG8Q04632 607 aa5.05□□□□□ -1.6
SMD2YLR275W YKR018CP36114 725 aa5.04□□□□□ -1.6
SMD2YLR275W APT2P36973 181 aa5.04□□□□□ -1.6
SMD2YLR275W YHR112CP38716 378 aa5.04□□□□□ -1.6
SMD2YLR275W FMP52P40008 231 aa5.04□□□□□ -1.6
SMD2YLR275W UBC9P50623 157 aaPredicted RBP5.04□□□□□ -1.6
SMD2YLR275W UBC11P52492 156 aa5.04□□□□□ -1.6
SMD2YLR275W PCL10P53124 433 aa5.04□□□□□ -1.6
SMD2YLR275W MCM21Q06675 368 aa5.04□□□□□ -1.6
SMD2YLR275W TRZ1P36159 838 aaPredicted RBP5.03□□□□□ -1.6
SMD2YLR275W PCL5P38794 229 aa5.03□□□□□ -1.6
SMD2YLR275W SDS3P40505 327 aa5.03□□□□□ -1.6
SMD2YLR275W STU2P46675 888 aa5.03□□□□□ -1.6
SMD2YLR275W GND2P53319 492 aa5.03□□□□□ -1.6
SMD2YLR275W ORC1P54784 914 aaPredicted RBP5.03□□□□□ -1.6
SMD2YLR275W CTK1Q03957 528 aaKnown RBP5.03□□□□□ -1.6
SMD2YLR275W ATG33Q06485 197 aa5.03□□□□□ -1.6
SMD2YLR275W SGO1Q08490 590 aa5.03□□□□□ -1.6
SMD2YLR275W HMG1P12683 1054 aa5.02□□□□□ -1.61
SMD2YLR275W SFL1P20134 766 aa5.02□□□□□ -1.61
SMD2YLR275W MTH1P35198 433 aa5.02□□□□□ -1.61
SMD2YLR275W CCT3P39077 534 aaKnown RBP5.02□□□□□ -1.61
SMD2YLR275W TEL2P53038 688 aa5.02□□□□□ -1.61
SMD2YLR275W AIM14P53109 570 aa5.02□□□□□ -1.61
SMD2YLR275W MTL1P53214 551 aa5.02□□□□□ -1.61
SMD2YLR275W TFB2Q02939 513 aa5.02□□□□□ -1.61
SMD2YLR275W IRC10Q08118 586 aa5.02□□□□□ -1.61
SMD2YLR275W SPC42P36094 363 aa5.01□□□□□ -1.61
SMD2YLR275W PCM1P38628 557 aaKnown RBP5.01□□□□□ -1.61
SMD2YLR275W REV7P38927 245 aa5.01□□□□□ -1.61
SMD2YLR275W YLR001CQ07895 862 aa5.01□□□□□ -1.61
SMD2YLR275W GIN4Q12263 1142 aa5.01□□□□□ -1.61
SMD2YLR275W HIR1P32479 840 aa5□□□□□ -1.61
SMD2YLR275W FMO1P38866 432 aa5□□□□□ -1.61
SMD2YLR275W LYS9P38999 446 aa5□□□□□ -1.61
SMD2YLR275W QRI1P43123 477 aaKnown RBP5□□□□□ -1.61
SMD2YLR275W ARP4P80428 489 aa5□□□□□ -1.61
SMD2YLR275W SSL2Q00578 843 aa5□□□□□ -1.61
SMD2YLR275W REC102Q02721 264 aa5□□□□□ -1.61
SMD2YLR275W HRP1Q99383 534 aaKnown RBP5□□□□□ -1.61
SMD2YLR275W CCR4P31384 837 aaKnown RBP4.99□□□□□ -1.61
SMD2YLR275W MVD1P32377 396 aaKnown RBP4.99□□□□□ -1.61
SMD2YLR275W NMD2P38798 1089 aaKnown RBP4.99□□□□□ -1.61
SMD2YLR275W NUP60P39705 539 aa4.99□□□□□ -1.61
SMD2YLR275W GID8P40208 455 aa4.99□□□□□ -1.61
SMD2YLR275W YAP1802P53309 568 aa4.99□□□□□ -1.61
SMD2YLR275W YNL193WP53870 558 aa4.99□□□□□ -1.61
SMD2YLR275W HMO1Q03973 246 aaKnown RBP4.99□□□□□ -1.61
SMD2YLR275W MRH1Q12117 320 aaPredicted RBP4.99□□□□□ -1.61
SMD2YLR275W YKL033W-AQ86ZR7 236 aa4.99□□□□□ -1.61
SMD2YLR275W NOP14Q99207 810 aaKnown RBP4.99□□□□□ -1.61
SMD2YLR275W SIR3P06701 978 aa4.98□□□□□ -1.61
SMD2YLR275W SFP1P32432 683 aa4.98□□□□□ -1.61
SMD2YLR275W CBR1P38626 284 aaKnown RBP4.98□□□□□ -1.61
SMD2YLR275W LEE1Q02799 301 aaKnown RBP4.98□□□□□ -1.61
SMD2YLR275W RNR1P21524 888 aaKnown RBP4.97□□□□□ -1.61
SMD2YLR275W ERG6P25087 383 aaKnown RBP4.97□□□□□ -1.61
SMD2YLR275W MNN4P36044 1178 aa4.97□□□□□ -1.61
SMD2YLR275W APN2P38207 520 aa4.97□□□□□ -1.61
SMD2YLR275W MNN1P39106 762 aa4.97□□□□□ -1.61
SMD2YLR275W PAN2P53010 1115 aaPredicted RBP4.97□□□□□ -1.61
SMD2YLR275W MET13P53128 600 aa4.97□□□□□ -1.61
SMD2YLR275W GIS1Q03833 894 aa4.97□□□□□ -1.61
SMD2YLR275W PYC1P11154 1178 aaKnown RBP4.96□□□□□ -1.62
SMD2YLR275W RPL8AP17076 256 aaKnown RBP4.96□□□□□ -1.62
SMD2YLR275W SSZ1P38788 538 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 31.8 ms