RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeastyeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC4YLR086W BRE4Q07660 1125 aa1.74□□□□□ -2.13
SMC4YLR086W YOL057WQ08225 711 aa1.74□□□□□ -2.13
SMC4YLR086W YDL177CQ12257 170 aa1.74□□□□□ -2.13
SMC4YLR086W YLR415CO13578 112 aa1.73□□□□□ -2.13
SMC4YLR086W CYC7P00045 113 aa1.73□□□□□ -2.13
SMC4YLR086W PTP2P29461 750 aa1.73□□□□□ -2.13
SMC4YLR086W NGG1P32494 702 aa1.73□□□□□ -2.13
SMC4YLR086W PET309P32522 965 aaPredicted RBP1.73□□□□□ -2.13
SMC4YLR086W PET127P32606 800 aa1.73□□□□□ -2.13
SMC4YLR086W FLR1P38124 548 aa1.73□□□□□ -2.13
SMC4YLR086W ZRG8P40021 1076 aa1.73□□□□□ -2.13
SMC4YLR086W GTS1P40956 396 aa1.73□□□□□ -2.13
SMC4YLR086W REC102Q02721 264 aa1.73□□□□□ -2.13
SMC4YLR086W SLU7Q02775 382 aaKnown RBP1.73□□□□□ -2.13
SMC4YLR086W HAL9Q12180 1030 aa1.73□□□□□ -2.13
SMC4YLR086W GAL10P04397 699 aa1.73□□□□□ -2.13
SMC4YLR086W ENA1P13587 1091 aa1.73□□□□□ -2.13
SMC4YLR086W PRP6P19735 899 aaPredicted RBP1.73□□□□□ -2.13
SMC4YLR086W CDC20P26309 610 aa1.73□□□□□ -2.13
SMC4YLR086W PRP19P32523 503 aaKnown RBP1.73□□□□□ -2.13
SMC4YLR086W SWE1P32944 819 aa1.73□□□□□ -2.13
SMC4YLR086W POA1P38218 177 aa1.73□□□□□ -2.13
SMC4YLR086W PEX14P53112 341 aa1.73□□□□□ -2.13
SMC4YLR086W PEF1P53238 335 aa1.73□□□□□ -2.13
SMC4YLR086W SUB1P54000 292 aaKnown RBP1.73□□□□□ -2.13
SMC4YLR086W ARP4P80428 489 aa1.73□□□□□ -2.13
SMC4YLR086W PTA1Q01329 785 aaPredicted RBP1.73□□□□□ -2.13
SMC4YLR086W ENA2Q01896 1091 aa1.73□□□□□ -2.13
SMC4YLR086W PLB2Q03674 706 aa1.73□□□□□ -2.13
SMC4YLR086W RPN7Q06103 429 aaKnown RBP1.73□□□□□ -2.13
SMC4YLR086W URN1Q06525 465 aaKnown RBP1.73□□□□□ -2.13
SMC4YLR086W VHS3Q08438 674 aa1.73□□□□□ -2.13
SMC4YLR086W ENA5Q12691 1091 aa1.73□□□□□ -2.13
SMC4YLR086W TRP3P00937 484 aa1.73□□□□□ -2.13
SMC4YLR086W TUF1P02992 437 aaKnown RBP1.73□□□□□ -2.13
SMC4YLR086W CDC26P14724 124 aa1.73□□□□□ -2.13
SMC4YLR086W YCL002CP25565 263 aa1.73□□□□□ -2.13
SMC4YLR086W AIM26P32858 118 aa1.73□□□□□ -2.13
SMC4YLR086W GRX7P38068 203 aa1.73□□□□□ -2.13
SMC4YLR086W RIM8P53179 542 aa1.73□□□□□ -2.13
SMC4YLR086W BRE5P53741 515 aaKnown RBP1.73□□□□□ -2.13
SMC4YLR086W ALO1P54783 526 aaKnown RBP1.73□□□□□ -2.13
SMC4YLR086W MAP1Q01662 387 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
SMC4YLR086W RXT3Q07458 294 aa1.73□□□□□ -2.13
SMC4YLR086W MNN4P36044 1178 aa1.72□□□□□ -2.13
SMC4YLR086W YKL133CP36066 463 aa1.72□□□□□ -2.13
SMC4YLR086W YKR051WP36142 418 aa1.72□□□□□ -2.13
SMC4YLR086W SET2P46995 733 aaKnown RBP1.72□□□□□ -2.13
SMC4YLR086W NPY1P53164 384 aa1.72□□□□□ -2.13
SMC4YLR086W GPD1Q00055 391 aaKnown RBP1.72□□□□□ -2.13
SMC4YLR086W MET14Q02196 202 aa1.72□□□□□ -2.13
SMC4YLR086W MUS81Q04149 632 aaPredicted RBP1.72□□□□□ -2.13
SMC4YLR086W ACK1Q07622 623 aaPredicted RBP1.72□□□□□ -2.13
SMC4YLR086W NKP1Q12493 238 aa1.72□□□□□ -2.13
SMC4YLR086W DFG16Q99234 619 aa1.72□□□□□ -2.13
SMC4YLR086W CYC1P00044 109 aaPredicted RBP1.72□□□□□ -2.13
SMC4YLR086W MSS18P08593 268 aa1.72□□□□□ -2.13
SMC4YLR086W IME1P21190 360 aa1.72□□□□□ -2.13
SMC4YLR086W TDA3P38758 523 aa1.72□□□□□ -2.13
SMC4YLR086W YGR153WP48238 217 aa1.72□□□□□ -2.13
SMC4YLR086W NOP15P53927 220 aaPredicted RBP1.72□□□□□ -2.13
SMC4YLR086W CDA2Q06703 312 aa1.72□□□□□ -2.13
SMC4YLR086W GPB1Q08886 897 aa1.72□□□□□ -2.13
SMC4YLR086W SIN3P22579 1536 aa1.72□□□□□ -2.13
SMC4YLR086W GAL1P04385 528 aa1.72□□□□□ -2.13
SMC4YLR086W SIR3P06701 978 aa1.72□□□□□ -2.13
SMC4YLR086W TRP4P07285 380 aaPredicted RBP1.72□□□□□ -2.13
SMC4YLR086W HSC82P15108 705 aaKnown RBP1.72□□□□□ -2.13
SMC4YLR086W SEC21P32074 935 aaKnown RBP1.72□□□□□ -2.13
SMC4YLR086W SRP101P32916 621 aa1.72□□□□□ -2.13
SMC4YLR086W PTH2P34222 208 aa1.72□□□□□ -2.13
SMC4YLR086W THI80P35202 319 aa1.72□□□□□ -2.13
SMC4YLR086W PMC1P38929 1173 aaPredicted RBP1.72□□□□□ -2.13
SMC4YLR086W ACA1P39970 489 aa1.72□□□□□ -2.13
SMC4YLR086W YIL108WP40483 696 aaKnown RBP1.72□□□□□ -2.13
SMC4YLR086W YJR008WP47085 338 aa1.72□□□□□ -2.13
SMC4YLR086W YJR120WP47157 116 aa1.72□□□□□ -2.13
SMC4YLR086W YGR130CP53278 816 aa1.72□□□□□ -2.13
SMC4YLR086W PHM6Q05637 104 aa1.72□□□□□ -2.13
SMC4YLR086W YPR196WQ06595 470 aa1.72□□□□□ -2.13
SMC4YLR086W RPS9AO13516 197 aaKnown RBP1.71□□□□□ -2.13
SMC4YLR086W PGI1P12709 554 aaKnown RBP1.71□□□□□ -2.13
SMC4YLR086W COX11P19516 300 aaKnown RBP1.71□□□□□ -2.13
SMC4YLR086W CWH43P25618 953 aa1.71□□□□□ -2.13
SMC4YLR086W NIC96P34077 839 aa1.71□□□□□ -2.13
SMC4YLR086W SSY5P47002 699 aa1.71□□□□□ -2.13
SMC4YLR086W AMA1P50082 593 aa1.71□□□□□ -2.13
SMC4YLR086W UBA2P52488 636 aa1.71□□□□□ -2.13
SMC4YLR086W AIM14P53109 570 aa1.71□□□□□ -2.13
SMC4YLR086W MRPL22P53881 309 aa1.71□□□□□ -2.13
SMC4YLR086W YNL034WP53963 612 aa1.71□□□□□ -2.13
SMC4YLR086W YNL018CP53976 612 aa1.71□□□□□ -2.13
SMC4YLR086W PPN1Q04119 674 aa1.71□□□□□ -2.13
SMC4YLR086W SSL1Q04673 461 aaPredicted RBP1.71□□□□□ -2.13
SMC4YLR086W CLF1Q12309 687 aaPredicted RBP1.71□□□□□ -2.13
SMC4YLR086W VPS5Q92331 675 aa1.71□□□□□ -2.13
SMC4YLR086W MYO2P19524 1574 aaKnown RBP1.71□□□□□ -2.14
SMC4YLR086W PRP4P20053 465 aaKnown RBP1.71□□□□□ -2.14
SMC4YLR086W SED4P25365 1065 aa1.71□□□□□ -2.14
SMC4YLR086W KCC4P25389 1037 aa1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms