RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeastyeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP16YKR086W TUB2P02557 457 aaKnown RBP1.41□□□□□ -2.18
PRP16YKR086W RPP2AP05319 106 aaKnown RBP1.41□□□□□ -2.18
PRP16YKR086W RAD18P10862 487 aa1.41□□□□□ -2.18
PRP16YKR086W HSF1P10961 833 aa1.41□□□□□ -2.18
PRP16YKR086W YKR078WP36158 585 aaKnown RBP1.41□□□□□ -2.18
PRP16YKR086W PZF1P39933 429 aa1.41□□□□□ -2.18
PRP16YKR086W NUP82P40368 713 aa1.41□□□□□ -2.18
PRP16YKR086W HXT16P47185 567 aa1.41□□□□□ -2.18
PRP16YKR086W HDA1P53973 706 aa1.41□□□□□ -2.18
PRP16YKR086W NPL3Q01560 414 aaKnown RBP RIP-Chip data1.41□□□□□ -2.18not detected
PRP16YKR086W FMP25Q08023 583 aa1.41□□□□□ -2.18
PRP16YKR086W SGO1Q08490 590 aa1.41□□□□□ -2.18
PRP16YKR086W YOR022CQ12204 715 aa1.41□□□□□ -2.18
PRP16YKR086W SWM1Q12379 170 aa1.41□□□□□ -2.18
PRP16YKR086W YGR161W-CQ3E744 92 aa1.41□□□□□ -2.18
PRP16YKR086W RRP5Q05022 1729 aaKnown RBP1.41□□□□□ -2.18
PRP16YKR086W DAL7P21826 554 aa1.41□□□□□ -2.18
PRP16YKR086W MTR3P48240 250 aaPredicted RBP1.41□□□□□ -2.18
PRP16YKR086W HSV2P50079 448 aaPredicted RBP1.41□□□□□ -2.18
PRP16YKR086W MAL11P53048 616 aa1.41□□□□□ -2.18
PRP16YKR086W RNH70P53331 553 aa1.41□□□□□ -2.18
PRP16YKR086W ENB1Q08299 606 aa1.41□□□□□ -2.18
PRP16YKR086W FLC1Q08967 793 aa1.41□□□□□ -2.18
PRP16YKR086W SRV2P17555 526 aaKnown RBP1.4□□□□□ -2.18
PRP16YKR086W SEC21P32074 935 aaKnown RBP1.4□□□□□ -2.18
PRP16YKR086W IRR1P40541 1150 aa1.4□□□□□ -2.18
PRP16YKR086W JSN1P47135 1091 aaKnown RBP RIP-Chip data1.4□□□□□ -2.18not detected
PRP16YKR086W YMR206WQ03695 313 aa1.4□□□□□ -2.18
PRP16YKR086W GUP2Q08929 609 aa1.4□□□□□ -2.18
PRP16YKR086W TRP4P07285 380 aaPredicted RBP1.4□□□□□ -2.19
PRP16YKR086W NGG1P32494 702 aa1.4□□□□□ -2.19
PRP16YKR086W GRX7P38068 203 aa1.4□□□□□ -2.19
PRP16YKR086W MOH1P38191 138 aa1.4□□□□□ -2.19
PRP16YKR086W CBR1P38626 284 aaKnown RBP1.4□□□□□ -2.19
PRP16YKR086W RGC1Q06108 1083 aaKnown RBP1.4□□□□□ -2.19
PRP16YKR086W AIM39Q08223 395 aa1.4□□□□□ -2.19
PRP16YKR086W PPM2Q08282 695 aa1.4□□□□□ -2.19
PRP16YKR086W NYV1Q12255 253 aa1.4□□□□□ -2.19
PRP16YKR086W SUT2Q12286 268 aa1.4□□□□□ -2.19
PRP16YKR086W YRF1-3P0CX14 1859 aa1.4□□□□□ -2.19
PRP16YKR086W YRF1-7P0CX15 1859 aa1.4□□□□□ -2.19
PRP16YKR086W YRF1-6P53819 1859 aa1.4□□□□□ -2.19
PRP16YKR086W TIM23P32897 222 aa1.4□□□□□ -2.19
PRP16YKR086W YPT53P36019 220 aa1.4□□□□□ -2.19
PRP16YKR086W CTF8P38877 133 aa1.4□□□□□ -2.19
PRP16YKR086W UBA2P52488 636 aa1.4□□□□□ -2.19
PRP16YKR086W YLR125WQ12138 136 aa1.4□□□□□ -2.19
PRP16YKR086W ADR1P07248 1323 aa1.39□□□□□ -2.19
PRP16YKR086W TOP3P13099 656 aa1.39□□□□□ -2.19
PRP16YKR086W MSD1P15179 658 aaKnown RBP1.39□□□□□ -2.19
PRP16YKR086W RPD3P32561 433 aa1.39□□□□□ -2.19
PRP16YKR086W REC104P33323 182 aa1.39□□□□□ -2.19
PRP16YKR086W STE13P33894 931 aa1.39□□□□□ -2.19
PRP16YKR086W BET3P36149 193 aa1.39□□□□□ -2.19
PRP16YKR086W YJL049WP47048 450 aa1.39□□□□□ -2.19
PRP16YKR086W CCM1P48237 864 aaPredicted RBP1.39□□□□□ -2.19
PRP16YKR086W RAI1P53063 387 aaKnown RBP1.39□□□□□ -2.19
PRP16YKR086W NPY1P53164 384 aa1.39□□□□□ -2.19
PRP16YKR086W POB3Q04636 552 aaKnown RBP1.39□□□□□ -2.19
PRP16YKR086W PNS1Q12412 539 aa1.39□□□□□ -2.19
PRP16YKR086W YTA7P40340 1379 aa1.39□□□□□ -2.19
PRP16YKR086W MPH2P0CD99 609 aa1.39□□□□□ -2.19
PRP16YKR086W CDC48P25694 835 aaKnown RBP1.39□□□□□ -2.19
PRP16YKR086W CTF13P35203 478 aa1.39□□□□□ -2.19
PRP16YKR086W APT2P36973 181 aa1.39□□□□□ -2.19
PRP16YKR086W PBP2P38151 413 aaKnown RBP RIP-Chip data1.39□□□□□ -2.19not detected
PRP16YKR086W BRN1P38170 754 aa1.39□□□□□ -2.19
PRP16YKR086W YBR053CP38235 358 aa1.39□□□□□ -2.19
PRP16YKR086W RSP5P39940 809 aaKnown RBP1.39□□□□□ -2.19
PRP16YKR086W TOK1P40310 691 aa1.39□□□□□ -2.19
PRP16YKR086W FKH2P41813 862 aa1.39□□□□□ -2.19
PRP16YKR086W ALG2P43636 503 aa1.39□□□□□ -2.19
PRP16YKR086W ORC1P54784 914 aaPredicted RBP1.39□□□□□ -2.19
PRP16YKR086W REH1Q06709 432 aa1.39□□□□□ -2.19
PRP16YKR086W ERR1P0CX10 437 aa1.38□□□□□ -2.19
PRP16YKR086W ERR2P0CX11 437 aa1.38□□□□□ -2.19
PRP16YKR086W RPL8BP29453 256 aaKnown RBP1.38□□□□□ -2.19
PRP16YKR086W RPC82P32349 654 aa1.38□□□□□ -2.19
PRP16YKR086W SET5P38890 526 aaKnown RBP1.38□□□□□ -2.19
PRP16YKR086W SDP1P40479 209 aa1.38□□□□□ -2.19
PRP16YKR086W AIM21P40563 679 aa1.38□□□□□ -2.19
PRP16YKR086W QRI1P43123 477 aaKnown RBP1.38□□□□□ -2.19
PRP16YKR086W ZDS1P50111 915 aaKnown RBP1.38□□□□□ -2.19
PRP16YKR086W UTP8P53276 713 aaKnown RBP1.38□□□□□ -2.19
PRP16YKR086W TAF8Q03750 510 aa1.38□□□□□ -2.19
PRP16YKR086W NSE3Q05541 303 aa1.38□□□□□ -2.19
PRP16YKR086W ENV7Q12003 364 aa1.38□□□□□ -2.19
PRP16YKR086W HBN1Q96VH4 193 aa1.38□□□□□ -2.19
PRP16YKR086W MET3P08536 511 aa1.38□□□□□ -2.19
PRP16YKR086W MIH1P23748 554 aa1.38□□□□□ -2.19
PRP16YKR086W CYS3P31373 394 aaKnown RBP1.38□□□□□ -2.19
PRP16YKR086W ATG19P35193 415 aa1.38□□□□□ -2.19
PRP16YKR086W SAK1P38990 1142 aa1.38□□□□□ -2.19
PRP16YKR086W AFG3P39925 761 aa1.38□□□□□ -2.19
PRP16YKR086W SDA1P53313 767 aaKnown RBP1.38□□□□□ -2.19
PRP16YKR086W NOG2P53742 486 aaKnown RBP1.38□□□□□ -2.19
PRP16YKR086W ORC4P54791 529 aa1.38□□□□□ -2.19
PRP16YKR086W MUK1Q02866 612 aa1.38□□□□□ -2.19
PRP16YKR086W PKH1Q03407 766 aa1.38□□□□□ -2.19
PRP16YKR086W YOL073CQ08232 322 aa1.38□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 38.3 ms