RNA–Protein interactions for RNA: YKL193C

SDS22, Transcript of Regulatory subunit of the type 1 protein phosphatase (PP1) Glc7p, yeast

Gene SDS22, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDS22	YKL193C	YGR283C	P53336	341 aa	Predicted RBP	4.63	□□□□□ -1.67
SDS22	YKL193C	RIM13	Q03792	727 aa		4.63	□□□□□ -1.67
SDS22	YKL193C	RPS9A	O13516	197 aa	Known RBP	4.62	□□□□□ -1.67
SDS22	YKL193C	HIR1	P32479	840 aa		4.62	□□□□□ -1.67
SDS22	YKL193C	SAK1	P38990	1142 aa		4.62	□□□□□ -1.67
SDS22	YKL193C	CHZ1	P40019	153 aa	Predicted RBP	4.62	□□□□□ -1.67
SDS22	YKL193C	PFA3	P42836	336 aa		4.62	□□□□□ -1.67
SDS22	YKL193C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
SDS22	YKL193C	UBC11	P52492	156 aa		4.62	□□□□□ -1.67
SDS22	YKL193C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
SDS22	YKL193C	DAL7	P21826	554 aa		4.61	□□□□□ -1.67
SDS22	YKL193C	YTA7	P40340	1379 aa		4.61	□□□□□ -1.67
SDS22	YKL193C	YUR1	P26725	428 aa		4.6	□□□□□ -1.67
SDS22	YKL193C	SPC29	P33419	253 aa		4.6	□□□□□ -1.67
SDS22	YKL193C	GDH3	P39708	457 aa		4.6	□□□□□ -1.67
SDS22	YKL193C	PZF1	P39933	429 aa		4.6	□□□□□ -1.67
SDS22	YKL193C	NUP82	P40368	713 aa		4.6	□□□□□ -1.67
SDS22	YKL193C	MAL11	P53048	616 aa		4.6	□□□□□ -1.67
SDS22	YKL193C	TAD1	P53065	400 aa		4.6	□□□□□ -1.67
SDS22	YKL193C	NOG2	P53742	486 aa	Known RBP	4.6	□□□□□ -1.67
SDS22	YKL193C	LRS4	Q04087	347 aa	Known RBP	4.6	□□□□□ -1.67
SDS22	YKL193C	CIT2	P08679	460 aa		4.59	□□□□□ -1.67
SDS22	YKL193C	YCL002C	P25565	263 aa		4.59	□□□□□ -1.67
SDS22	YKL193C	CYS3	P31373	394 aa	Known RBP	4.59	□□□□□ -1.67
SDS22	YKL193C	NDC80	P40460	691 aa		4.59	□□□□□ -1.67
SDS22	YKL193C	MET7	Q08645	548 aa		4.59	□□□□□ -1.67
SDS22	YKL193C	YOR022C	Q12204	715 aa		4.59	□□□□□ -1.67
SDS22	YKL193C	HOM2	P13663	365 aa	Known RBP	4.58	□□□□□ -1.68
SDS22	YKL193C	NGG1	P32494	702 aa		4.58	□□□□□ -1.68
SDS22	YKL193C	TY4A-J	P47023	414 aa		4.58	□□□□□ -1.68
SDS22	YKL193C	ATP25	Q03153	612 aa		4.58	□□□□□ -1.68
SDS22	YKL193C	OSW1	Q08692	278 aa		4.58	□□□□□ -1.68
SDS22	YKL193C	GPR1	Q12361	961 aa		4.58	□□□□□ -1.68
SDS22	YKL193C	BAP3	P41815	604 aa		4.57	□□□□□ -1.68
SDS22	YKL193C	SSY5	P47002	699 aa		4.57	□□□□□ -1.68
SDS22	YKL193C	YDR514C	Q04408	483 aa		4.57	□□□□□ -1.68
SDS22	YKL193C	REH1	Q06709	432 aa		4.57	□□□□□ -1.68
SDS22	YKL193C	YLR125W	Q12138	136 aa		4.57	□□□□□ -1.68
SDS22	YKL193C	RPN13	O13563	156 aa		4.56	□□□□□ -1.68
SDS22	YKL193C	PRC1	P00729	532 aa		4.56	□□□□□ -1.68
SDS22	YKL193C	PHO8	P11491	566 aa		4.56	□□□□□ -1.68
SDS22	YKL193C	PER1	P25625	357 aa		4.56	□□□□□ -1.68
SDS22	YKL193C	SIC1	P38634	284 aa		4.56	□□□□□ -1.68
SDS22	YKL193C	BNA3	P47039	444 aa	Known RBP	4.56	□□□□□ -1.68
SDS22	YKL193C	SEG1	Q04279	960 aa		4.56	□□□□□ -1.68
SDS22	YKL193C	SIR3	P06701	978 aa		4.55	□□□□□ -1.68
SDS22	YKL193C	VPS34	P22543	875 aa		4.55	□□□□□ -1.68
SDS22	YKL193C	SAP190	P36123	1033 aa		4.55	□□□□□ -1.68
SDS22	YKL193C	RSC3	Q06639	885 aa		4.55	□□□□□ -1.68
SDS22	YKL193C	THI21	Q08975	551 aa		4.55	□□□□□ -1.68
SDS22	YKL193C	YBR182C-A	Q8TGU6	64 aa		4.55	□□□□□ -1.68
SDS22	YKL193C	SET5	P38890	526 aa	Known RBP	4.54	□□□□□ -1.68
SDS22	YKL193C	PAC2	P39937	518 aa		4.54	□□□□□ -1.68
SDS22	YKL193C	HXT16	P47185	567 aa		4.54	□□□□□ -1.68
SDS22	YKL193C	YAP1802	P53309	568 aa		4.54	□□□□□ -1.68
SDS22	YKL193C	FPR4	Q06205	392 aa	Predicted RBP	4.54	□□□□□ -1.68
SDS22	YKL193C	ATG11	Q12527	1178 aa		4.54	□□□□□ -1.68
SDS22	YKL193C	MEF1	P25039	761 aa		4.53	□□□□□ -1.68
SDS22	YKL193C	RLP7	P40693	322 aa	Known RBP	4.53	□□□□□ -1.68
SDS22	YKL193C	OSW7	P43611	510 aa		4.53	□□□□□ -1.68
SDS22	YKL193C	BPL1	P48445	690 aa	Predicted RBP	4.53	□□□□□ -1.68
SDS22	YKL193C	RGT2	Q12300	763 aa		4.53	□□□□□ -1.68
SDS22	YKL193C	MDM12	Q92328	271 aa		4.53	□□□□□ -1.68
SDS22	YKL193C	THI4	P32318	326 aa		4.52	□□□□□ -1.69
SDS22	YKL193C	MTC2	P34246	357 aa		4.52	□□□□□ -1.69
SDS22	YKL193C	GLG1	P36143	616 aa		4.52	□□□□□ -1.69
SDS22	YKL193C	BDH2	P39713	417 aa		4.52	□□□□□ -1.69
SDS22	YKL193C	SHR5	P41912	237 aa		4.52	□□□□□ -1.69
SDS22	YKL193C	ALY2	P47029	1046 aa		4.52	□□□□□ -1.69
SDS22	YKL193C	TEX1	P53851	422 aa	Known RBP	4.52	□□□□□ -1.69
SDS22	YKL193C	ORC1	P54784	914 aa	Predicted RBP	4.52	□□□□□ -1.69
SDS22	YKL193C	YDR338C	Q05497	695 aa		4.52	□□□□□ -1.69
SDS22	YKL193C	DIF1	O13577	133 aa		4.51	□□□□□ -1.69
SDS22	YKL193C	CDC9	P04819	755 aa		4.51	□□□□□ -1.69
SDS22	YKL193C	MSH2	P25847	964 aa		4.51	□□□□□ -1.69
SDS22	YKL193C	MCD4	P36051	919 aa		4.51	□□□□□ -1.69
SDS22	YKL193C	PYC1	P11154	1178 aa	Known RBP	4.5	□□□□□ -1.69
SDS22	YKL193C	VBA3	P25594	458 aa		4.5	□□□□□ -1.69
SDS22	YKL193C	REV7	P38927	245 aa		4.5	□□□□□ -1.69
SDS22	YKL193C	DSS1	P39112	969 aa		4.5	□□□□□ -1.69
SDS22	YKL193C	ARG2	P40360	574 aa		4.5	□□□□□ -1.69
SDS22	YKL193C	CTR1	P49573	406 aa		4.5	□□□□□ -1.69
SDS22	YKL193C	ZDS1	P50111	915 aa	Known RBP	4.5	□□□□□ -1.69
SDS22	YKL193C	YKL033W-A	Q86ZR7	236 aa		4.5	□□□□□ -1.69
SDS22	YKL193C	GSY1	P23337	708 aa		4.49	□□□□□ -1.69
SDS22	YKL193C	PTP1	P25044	335 aa		4.49	□□□□□ -1.69
SDS22	YKL193C	STO1	P34160	861 aa	Known RBP	4.49	□□□□□ -1.69
SDS22	YKL193C	UBC9	P50623	157 aa	Predicted RBP	4.49	□□□□□ -1.69
SDS22	YKL193C	PAN2	P53010	1115 aa	Predicted RBP	4.49	□□□□□ -1.69
SDS22	YKL193C	ZIP2	P53061	704 aa		4.49	□□□□□ -1.69
SDS22	YKL193C	TDA9	Q04545	1251 aa		4.49	□□□□□ -1.69
SDS22	YKL193C	CIR2	Q08822	631 aa		4.49	□□□□□ -1.69
SDS22	YKL193C	PEX6	P33760	1030 aa		4.48	□□□□□ -1.69
SDS22	YKL193C	NET1	P47035	1189 aa		4.48	□□□□□ -1.69
SDS22	YKL193C	UGO1	Q03327	502 aa		4.48	□□□□□ -1.69
SDS22	YKL193C	NTG2	Q08214	380 aa		4.48	□□□□□ -1.69
SDS22	YKL193C	SFB3	P38810	929 aa		4.47	□□□□□ -1.69
SDS22	YKL193C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.47	□□□□□ -1.69	not detected
SDS22	YKL193C	CCT3	P39077	534 aa	Known RBP	4.47	□□□□□ -1.69
SDS22	YKL193C	CAF16	P43569	289 aa		4.47	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 47.4 ms