RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W CKB2P38930 258 aa2.82□□□□□ -1.96
SNU114YKL173W MPT5P39016 859 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
SNU114YKL173W ATG33Q06485 197 aa2.82□□□□□ -1.96
SNU114YKL173W GUP2Q08929 609 aa2.82□□□□□ -1.96
SNU114YKL173W NYV1Q12255 253 aa2.82□□□□□ -1.96
SNU114YKL173W NTO1Q12311 748 aa2.82□□□□□ -1.96
SNU114YKL173W MSS18P08593 268 aa2.82□□□□□ -1.96
SNU114YKL173W YEF3P16521 1044 aaKnown RBP2.82□□□□□ -1.96
SNU114YKL173W STE13P33894 931 aa2.82□□□□□ -1.96
SNU114YKL173W YEL1P34225 687 aa2.82□□□□□ -1.96
SNU114YKL173W HXT6P39003 570 aaKnown RBP2.82□□□□□ -1.96
SNU114YKL173W HXT7P39004 570 aa2.82□□□□□ -1.96
SNU114YKL173W GTF1P53260 183 aaPredicted RBP2.82□□□□□ -1.96
SNU114YKL173W HDA1P53973 706 aa2.82□□□□□ -1.96
SNU114YKL173W ECM9Q02202 377 aa2.82□□□□□ -1.96
SNU114YKL173W ATP25Q03153 612 aa2.82□□□□□ -1.96
SNU114YKL173W CIA1Q05583 330 aa2.82□□□□□ -1.96
SNU114YKL173W WHI4Q07655 649 aaKnown RBP2.82□□□□□ -1.96
SNU114YKL173W TRE2Q08693 809 aa2.82□□□□□ -1.96
SNU114YKL173W ENV7Q12003 364 aa2.82□□□□□ -1.96
SNU114YKL173W RPS21AP0C0V8 87 aaKnown RBP2.82□□□□□ -1.96
SNU114YKL173W AAR2P32357 355 aaPredicted RBP2.82□□□□□ -1.96
SNU114YKL173W PRP19P32523 503 aaKnown RBP2.82□□□□□ -1.96
SNU114YKL173W SRP101P32916 621 aa2.82□□□□□ -1.96
SNU114YKL173W POA1P38218 177 aa2.82□□□□□ -1.96
SNU114YKL173W AIM21P40563 679 aa2.82□□□□□ -1.96
SNU114YKL173W DUG1P43616 481 aaKnown RBP2.82□□□□□ -1.96
SNU114YKL173W CWC22P53333 577 aaKnown RBP2.82□□□□□ -1.96
SNU114YKL173W HMG1P12683 1054 aa2.81□□□□□ -1.96
SNU114YKL173W KCC4P25389 1037 aa2.81□□□□□ -1.96
SNU114YKL173W NFU1P32860 256 aa2.81□□□□□ -1.96
SNU114YKL173W KTR4P38131 464 aa2.81□□□□□ -1.96
SNU114YKL173W CCT5P40413 562 aaKnown RBP2.81□□□□□ -1.96
SNU114YKL173W CCM1P48237 864 aaPredicted RBP2.81□□□□□ -1.96
SNU114YKL173W ENB1Q08299 606 aa2.81□□□□□ -1.96
SNU114YKL173W ADE8P04161 214 aa2.81□□□□□ -1.96
SNU114YKL173W HEM12P32347 362 aaPredicted RBP2.81□□□□□ -1.96
SNU114YKL173W CHS7P38843 316 aa2.81□□□□□ -1.96
SNU114YKL173W HOS4P40480 1083 aa2.81□□□□□ -1.96
SNU114YKL173W GZF3P42944 551 aaKnown RBP2.81□□□□□ -1.96
SNU114YKL173W RPS0BP46654 252 aaKnown RBP2.81□□□□□ -1.96
SNU114YKL173W PHO23P50947 330 aa2.81□□□□□ -1.96
SNU114YKL173W RAI1P53063 387 aaKnown RBP2.81□□□□□ -1.96
SNU114YKL173W SSL1Q04673 461 aaPredicted RBP2.81□□□□□ -1.96
SNU114YKL173W TMA10Q06177 86 aa2.81□□□□□ -1.96
SNU114YKL173W GPR1Q12361 961 aa2.81□□□□□ -1.96
SNU114YKL173W TUB3P09734 445 aaKnown RBP2.8□□□□□ -1.96
SNU114YKL173W CCR4P31384 837 aaKnown RBP2.8□□□□□ -1.96
SNU114YKL173W TRZ1P36159 838 aaPredicted RBP2.8□□□□□ -1.96
SNU114YKL173W CTF8P38877 133 aa2.8□□□□□ -1.96
SNU114YKL173W TAD1P53065 400 aa2.8□□□□□ -1.96
SNU114YKL173W YTM1Q12024 460 aaPredicted RBP2.8□□□□□ -1.96
SNU114YKL173W RRP6Q12149 733 aaKnown RBP2.8□□□□□ -1.96
SNU114YKL173W NPC2Q12408 173 aa2.8□□□□□ -1.96
SNU114YKL173W RPA190P10964 1664 aaKnown RBP2.8□□□□□ -1.96
SNU114YKL173W KAR4P25583 335 aa2.8□□□□□ -1.96
SNU114YKL173W PMI40P29952 429 aaKnown RBP2.8□□□□□ -1.96
SNU114YKL173W DBF20P32328 564 aa2.8□□□□□ -1.96
SNU114YKL173W HOG1P32485 435 aa2.8□□□□□ -1.96
SNU114YKL173W REC104P33323 182 aa2.8□□□□□ -1.96
SNU114YKL173W NIC96P34077 839 aa2.8□□□□□ -1.96
SNU114YKL173W MNN4P36044 1178 aa2.8□□□□□ -1.96
SNU114YKL173W NPY1P53164 384 aa2.8□□□□□ -1.96
SNU114YKL173W MOT3P54785 490 aaKnown RBP2.8□□□□□ -1.96
SNU114YKL173W SNP1Q00916 300 aaPredicted RBP2.8□□□□□ -1.96
SNU114YKL173W ECM38Q05902 660 aaPredicted RBP2.8□□□□□ -1.96
SNU114YKL173W ATG2P53855 1592 aa2.8□□□□□ -1.96
SNU114YKL173W AEP2P22136 580 aa2.79□□□□□ -1.96
SNU114YKL173W GSY1P23337 708 aa2.79□□□□□ -1.96
SNU114YKL173W PER1P25625 357 aa2.79□□□□□ -1.96
SNU114YKL173W YRO2P38079 344 aa2.79□□□□□ -1.96
SNU114YKL173W CEG1Q01159 459 aaPredicted RBP2.79□□□□□ -1.96
SNU114YKL173W MET7Q08645 548 aa2.79□□□□□ -1.96
SNU114YKL173W PUS9Q12069 462 aa2.79□□□□□ -1.96
SNU114YKL173W NOT3P06102 836 aaKnown RBP2.79□□□□□ -1.96
SNU114YKL173W PTP2P29461 750 aa2.79□□□□□ -1.96
SNU114YKL173W SDP1P40479 209 aa2.79□□□□□ -1.96
SNU114YKL173W ERR3P42222 437 aa2.79□□□□□ -1.96
SNU114YKL173W MNN11P46985 422 aaKnown RBP2.79□□□□□ -1.96
SNU114YKL173W RLP24Q07915 199 aaKnown RBP2.79□□□□□ -1.96
SNU114YKL173W RRI2Q12348 645 aa2.79□□□□□ -1.96
SNU114YKL173W YOL087CQ99247 1116 aa2.79□□□□□ -1.96
SNU114YKL173W HIR3P47171 1648 aa2.79□□□□□ -1.96
SNU114YKL173W RPP2AP05319 106 aaKnown RBP2.79□□□□□ -1.96
SNU114YKL173W ATP12P22135 325 aa2.79□□□□□ -1.96
SNU114YKL173W PPH3P32345 308 aa2.79□□□□□ -1.96
SNU114YKL173W TRM2P33753 639 aa2.79□□□□□ -1.96
SNU114YKL173W EMC3P36039 253 aa2.79□□□□□ -1.96
SNU114YKL173W BIT2P38346 545 aa2.79□□□□□ -1.96
SNU114YKL173W MSS4P38994 779 aa2.79□□□□□ -1.96
SNU114YKL173W BNA1P47096 177 aa2.79□□□□□ -1.96
SNU114YKL173W MCM6P53091 1017 aaKnown RBP2.79□□□□□ -1.96
SNU114YKL173W GIR2Q03768 265 aaPredicted RBP2.79□□□□□ -1.96
SNU114YKL173W GUD1Q07729 489 aa2.79□□□□□ -1.96
SNU114YKL173W ENA1P13587 1091 aa2.78□□□□□ -1.96
SNU114YKL173W PRP4P20053 465 aaKnown RBP2.78□□□□□ -1.96
SNU114YKL173W YCL002CP25565 263 aa2.78□□□□□ -1.96
SNU114YKL173W FAT1P38225 669 aa2.78□□□□□ -1.96
SNU114YKL173W QRI7P43122 407 aa2.78□□□□□ -1.96
SNU114YKL173W ENA2Q01896 1091 aa2.78□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 164.1 ms