RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A CBR1P38626 284 aaKnown RBP4.45□□□□□ -1.7
SFT1YKL006C-A BNA2P47125 453 aa4.45□□□□□ -1.7
SFT1YKL006C-A IRC10Q08118 586 aa4.45□□□□□ -1.7
SFT1YKL006C-A GPR1Q12361 961 aa4.45□□□□□ -1.7
SFT1YKL006C-A ATG11Q12527 1178 aa4.45□□□□□ -1.7
SFT1YKL006C-A Q0142Q9ZZW4 58 aa4.45□□□□□ -1.7
SFT1YKL006C-A CIT2P08679 460 aa4.44□□□□□ -1.7
SFT1YKL006C-A MSH2P25847 964 aa4.44□□□□□ -1.7
SFT1YKL006C-A REV7P38927 245 aa4.44□□□□□ -1.7
SFT1YKL006C-A TEX1P53851 422 aaKnown RBP4.44□□□□□ -1.7
SFT1YKL006C-A RIA1P53893 1110 aa4.44□□□□□ -1.7
SFT1YKL006C-A UGO1Q03327 502 aa4.44□□□□□ -1.7
SFT1YKL006C-A CTK1Q03957 528 aaKnown RBP4.44□□□□□ -1.7
SFT1YKL006C-A NHX1Q04121 633 aa4.44□□□□□ -1.7
SFT1YKL006C-A YLR149CQ99296 730 aa4.44□□□□□ -1.7
SFT1YKL006C-A MET6P05694 767 aaKnown RBP4.43□□□□□ -1.7
SFT1YKL006C-A RAD18P10862 487 aa4.43□□□□□ -1.7
SFT1YKL006C-A CDC43P18898 376 aa4.43□□□□□ -1.7
SFT1YKL006C-A MEF1P25039 761 aa4.43□□□□□ -1.7
SFT1YKL006C-A APT2P36973 181 aa4.43□□□□□ -1.7
SFT1YKL006C-A HSL7P38274 827 aa4.43□□□□□ -1.7
SFT1YKL006C-A BCD1P38772 366 aa4.43□□□□□ -1.7
SFT1YKL006C-A DOT6P40059 670 aaKnown RBP4.43□□□□□ -1.7
SFT1YKL006C-A HOS4P40480 1083 aa4.43□□□□□ -1.7
SFT1YKL006C-A GIS1Q03833 894 aa4.43□□□□□ -1.7
SFT1YKL006C-A RPN7Q06103 429 aaKnown RBP4.43□□□□□ -1.7
SFT1YKL006C-A SRD1P09007 221 aa4.42□□□□□ -1.7
SFT1YKL006C-A HOG1P32485 435 aa4.42□□□□□ -1.7
SFT1YKL006C-A FMP52P40008 231 aa4.42□□□□□ -1.7
SFT1YKL006C-A SDS3P40505 327 aa4.42□□□□□ -1.7
SFT1YKL006C-A SSL2Q00578 843 aa4.42□□□□□ -1.7
SFT1YKL006C-A POB3Q04636 552 aaKnown RBP4.42□□□□□ -1.7
SFT1YKL006C-A SGO1Q08490 590 aa4.42□□□□□ -1.7
SFT1YKL006C-A MRH1Q12117 320 aaPredicted RBP4.42□□□□□ -1.7
SFT1YKL006C-A ADE2P21264 571 aaKnown RBP4.41□□□□□ -1.7
SFT1YKL006C-A TRZ1P36159 838 aaPredicted RBP4.41□□□□□ -1.7
SFT1YKL006C-A YHR112CP38716 378 aa4.41□□□□□ -1.7
SFT1YKL006C-A MIP6P38760 659 aaKnown RBP4.41□□□□□ -1.7
SFT1YKL006C-A ECM1P39715 212 aa4.41□□□□□ -1.7
SFT1YKL006C-A UBC11P52492 156 aa4.41□□□□□ -1.7
SFT1YKL006C-A KIN3P22209 435 aa4.4□□□□□ -1.71
SFT1YKL006C-A MVD1P32377 396 aaKnown RBP4.4□□□□□ -1.71
SFT1YKL006C-A APL2P36000 726 aaPredicted RBP4.4□□□□□ -1.71
SFT1YKL006C-A YKR051WP36142 418 aa4.4□□□□□ -1.71
SFT1YKL006C-A BAP3P41815 604 aa4.4□□□□□ -1.71
SFT1YKL006C-A QRI1P43123 477 aaKnown RBP4.4□□□□□ -1.71
SFT1YKL006C-A UBC9P50623 157 aaPredicted RBP4.4□□□□□ -1.71
SFT1YKL006C-A MTL1P53214 551 aa4.4□□□□□ -1.71
SFT1YKL006C-A ARG5,6Q01217 863 aa4.4□□□□□ -1.71
SFT1YKL006C-A FPR4Q06205 392 aaPredicted RBP4.4□□□□□ -1.71
SFT1YKL006C-A YTA7P40340 1379 aa4.4□□□□□ -1.71
SFT1YKL006C-A PPG1P32838 368 aa4.39□□□□□ -1.71
SFT1YKL006C-A CCT3P39077 534 aaKnown RBP4.39□□□□□ -1.71
SFT1YKL006C-A TEL2P53038 688 aa4.39□□□□□ -1.71
SFT1YKL006C-A YAP1802P53309 568 aa4.39□□□□□ -1.71
SFT1YKL006C-A ORC1P54784 914 aaPredicted RBP4.39□□□□□ -1.71
SFT1YKL006C-A GFA1P14742 717 aaKnown RBP4.38□□□□□ -1.71
SFT1YKL006C-A HIR1P32479 840 aa4.38□□□□□ -1.71
SFT1YKL006C-A SFB3P38810 929 aa4.38□□□□□ -1.71
SFT1YKL006C-A AIM14P53109 570 aa4.38□□□□□ -1.71
SFT1YKL006C-A COX18P53239 316 aa4.38□□□□□ -1.71
SFT1YKL006C-A REC102Q02721 264 aa4.38□□□□□ -1.71
SFT1YKL006C-A MCM21Q06675 368 aa4.38□□□□□ -1.71
SFT1YKL006C-A NTG2Q08214 380 aa4.38□□□□□ -1.71
SFT1YKL006C-A YKR018CP36114 725 aa4.37□□□□□ -1.71
SFT1YKL006C-A TDP1P38319 544 aa4.37□□□□□ -1.71
SFT1YKL006C-A NUP60P39705 539 aa4.37□□□□□ -1.71
SFT1YKL006C-A PAN2P53010 1115 aaPredicted RBP4.37□□□□□ -1.71
SFT1YKL006C-A PCL10P53124 433 aa4.37□□□□□ -1.71
SFT1YKL006C-A ATG33Q06485 197 aa4.37□□□□□ -1.71
SFT1YKL006C-A GIN4Q12263 1142 aa4.37□□□□□ -1.71
SFT1YKL006C-A YKL033W-AQ86ZR7 236 aa4.37□□□□□ -1.71
SFT1YKL006C-A SFL1P20134 766 aa4.36□□□□□ -1.71
SFT1YKL006C-A HCA4P20448 770 aaKnown RBP4.36□□□□□ -1.71
SFT1YKL006C-A MIH1P23748 554 aa4.36□□□□□ -1.71
SFT1YKL006C-A ERG6P25087 383 aaKnown RBP4.36□□□□□ -1.71
SFT1YKL006C-A FMO1P38866 432 aa4.36□□□□□ -1.71
SFT1YKL006C-A RNH70P53331 553 aa4.36□□□□□ -1.71
SFT1YKL006C-A COG8Q04632 607 aa4.36□□□□□ -1.71
SFT1YKL006C-A DIA2Q08496 732 aaPredicted RBP4.36□□□□□ -1.71
SFT1YKL006C-A PCL2P25693 308 aa4.35□□□□□ -1.71
SFT1YKL006C-A YEL1P34225 687 aa4.35□□□□□ -1.71
SFT1YKL006C-A LYS9P38999 446 aa4.35□□□□□ -1.71
SFT1YKL006C-A CTR1P49573 406 aa4.35□□□□□ -1.71
SFT1YKL006C-A MSL5Q12186 476 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
SFT1YKL006C-A ZRT2Q12436 422 aa4.35□□□□□ -1.71
SFT1YKL006C-A HRP1Q99383 534 aaKnown RBP4.35□□□□□ -1.71
SFT1YKL006C-A PYC1P11154 1178 aaKnown RBP4.34□□□□□ -1.71
SFT1YKL006C-A HMG1P12683 1054 aa4.34□□□□□ -1.71
SFT1YKL006C-A RNR1P21524 888 aaKnown RBP4.34□□□□□ -1.71
SFT1YKL006C-A DMC1P25453 334 aa4.34□□□□□ -1.71
SFT1YKL006C-A SFP1P32432 683 aa4.34□□□□□ -1.71
SFT1YKL006C-A MNN4P36044 1178 aa4.34□□□□□ -1.71
SFT1YKL006C-A YJL206CP39529 758 aa4.34□□□□□ -1.71
SFT1YKL006C-A NDC80P40460 691 aa4.34□□□□□ -1.71
SFT1YKL006C-A VPS73P53142 486 aaKnown RBP4.34□□□□□ -1.71
SFT1YKL006C-A SMX3P54999 86 aaPredicted RBP4.34□□□□□ -1.71
SFT1YKL006C-A GPD1Q00055 391 aaKnown RBP4.34□□□□□ -1.71
SFT1YKL006C-A TFB2Q02939 513 aa4.34□□□□□ -1.71
SFT1YKL006C-A YML122CQ03207 126 aa4.34□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms